Factsheet for Os12t0548200-02

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400052312	Potato	cytosol	10.59	94.23
VIT_00s0188g00150.t01	Wine grape	cytosol	4.54	91.3
TraesCS5A01G092500.2	Wheat	nucleus	78.59	81.5
TraesCS5D01G104700.2	Wheat	nucleus	78.27	81.44
HORVU5Hr1G024350.1	Barley	plasma membrane	64.97	81.44
TraesCS5B01G098600.2	Wheat	nucleus	78.05	80.94
EES17168	Sorghum	mitochondrion, nucleus	77.3	79.71
Zm00001d041647_P004	Maize	nucleus	75.46	78.96
VIT_10s0116g01370.t01	Wine grape	extracellular	7.03	77.38
Zm00001d023838_P014	Maize	mitochondrion, nucleus	73.62	75.42
VIT_00s0188g00210.t01	Wine grape	plastid	10.7	61.11
Os11t0661200-01	Rice	nucleus	54.81	57.09
GSMUA_Achr11P...	Banana	nucleus	56.43	56.25
KRH53945	Soybean	nucleus, plastid	51.35	51.52
CDY31429	Canola	plastid	44.65	50.61
KRH63993	Soybean	nucleus, plastid	49.84	50.55
KRH40961	Soybean	endoplasmic reticulum	50.92	50.43
GSMUA_Achr3P24020_001	Banana	nucleus	43.35	50.25
CDX76445	Canola	nucleus	45.19	50.12
Bra020913.1-P	Field mustard	nucleus	45.19	50.0
Solyc09g018960.2.1	Tomato	nucleus	49.73	49.95
AT4G12770.1	Thale cress	nucleus	47.68	49.49
VIT_07s0031g02350.t01	Wine grape	nucleus, plastid	50.7	48.96
AT4G12780.1	Thale cress	nucleus	47.78	48.89
KRH59609	Soybean	nucleus	50.7	47.71
Solyc06g082840.2.1	Tomato	nucleus	49.62	47.66
PGSC0003DMT400071173	Potato	nucleus	48.86	47.38
Os01t0355500-02	Rice	nucleus	46.49	45.36
PGSC0003DMT400052311	Potato	nucleus	40.97	44.91
Os03t0198300-02	Rice	nucleus	11.35	17.3
Os01t0634300-00	Rice	nucleus	16.0	11.07
Os05t0579900-01	Rice	nucleus	9.3	7.78

Protein Annotations

Gene3D:1.10.287.110	MapMan:22.1.6.4	EntrezGene:4352459	ProteinID:ABA98877.1	ProteinID:BAF29989.1	ProteinID:BAT17544.1
ncoils:Coil	GO:GO:0005575	GO:GO:0006810	GO:GO:0006898	GO:GO:0008150	GO:GO:0031982
InterPro:IPR036869	InterPro:J_dom_sf	EnsemblPlantsGene:Os12g0548200	EnsemblPlants:Os12t0548200-02	PANTHER:PTHR23172	PANTHER:PTHR23172:SF53
UniProt:Q2QNZ9	SUPFAM:SSF46565	UniParc:UPI0000680E90	RefSeq:XP_015620019.1	SEG:seg	:

Description

DnaJ domain protein C82Hypothetical conserved gene. (Os12t0548200-01);Heat shock protein DnaJ, N-terminal domain containing protein. (Os12t0548200-02)

Coordinates

chr12:-:22173286..22180478

Molecular Weight (calculated)

102044.0 Da

IEP (calculated)

6.750

GRAVY (calculated)

-1.036

Length

925 amino acids

Sequence
(BLAST)

001: MDDFQGLLAR DFGLRPQGKA APMSAARAAA SSGSAWSNSR SASASSAAAA TAPPAPLYDD LFGAAAPSAP PPKAAPSPSL DAIFDSFKEP SAPDAPPKPK
101: HSSMPVFDKP VYDDDIFDGV PGVKSSSSAR FDDVFGGSHA PPPPAYDDLL GGFGSKPEVK EVLPEEKRKP EPAASSAGFD DLIPGFGGRI PMRARETVGT
201: KDKNVSMSTS KPASMASDPF DVLGTTSTSK HTSSGIFTDP LDELGRPAKS QGKKHDNTAV DSGLFEDSST FNQVPKSEPL FTSELNDDLK DRNGSTKDRD
301: SSPVQNFSRK NTTQKPSVEN FENIFPKSQS ARYSDVHVDI GASGSEKYSG NGMDDQSPRS DESEDEIWLT VSEIPLFTQP TSAPPPSRTP PPLAVKQKPH
401: GSQAKRKDDN YPRRSNQNHN HHRSSSNQAG SSSIDELEDF AMGKSQSSAY DNANPFNEEE FEHSSSAAAS AAAMKEAMDK AEAKFKHAKV VRERERDAKH
501: RNREQQEQDD EARFNTQDHE ERDRQERLER EREMRQREEK EREQRRLEEE RELEKQRERE RAARQAVERA TKEARERAAA EARAKAEREA RQRAERAAVQ
601: RAQKEARERA AVDARERAER AAAEAKERAA AEAKEKVATQ ARDRAAAERA AVERAQQEAR RRAERAAVER AASEARERQA AEARERQAAA AAAAAAAAKE
701: KQSKPDDLES FFGMGARANS APKQRAPTAD SMFNSQTQNR GAASSASASM RKASSTTNIA DDLSAIFGGA PTSSEEFQEI EGESEERRRA RFERHQRTRE
801: RAAKALAEKN ERDMQVQREQ AERHRISETM DFEIKRWAAG KEGNLRALLS TLQYVLWPEC GWQPVSLTDL ITAAAVKKVY RKATLCIHPD KVQQKGANLQ
901: QKYVAEKVFD LLKEAWNKFN SEELF

Best Arabidopsis Sequence Match ( AT4G12780.1 )
(BLAST)

001: MDDFTGLLAR DFGLKPQGKS APMASQSNSS AADFNTFASS YSFATAAGKK SDSLPVFDDP GRDGDDLLFK DVFSGPPPPK YGSSSGDSRS PSAPAFDYDA
101: MFKEPKSKSA SSMPVYDKPV YDDEDVFESI PELKIPSTSS QSARFENVFS SISSSPTKHR KQNSSPFDDL MGNNLGKKGA DSDREEKGSS IFDDLIPGFG
201: RTSSPPSKRT TSETTNQSEK APYRTAETSS NVEEDPFVVL EESESTPREP SRTDPLDDIG KFNSRKTDHS SVHGGVFVDI DPLDNLGKPG PDMNSKGKSH
301: LRPPGNISGS QSPPVESPGS YHSKKVSFED FLEPHNMSTP PPTNSNGSFE SSDDVWLTVS EIPLFTQPTS APPPTRPPPP RPTRPIKKKV NEPSIPTSAY
401: HSHVPSSGRA SVNSPTASQM DELDDFSIGR NQTAANGYPD PSSGEDSDVF STAAASAAAM KDAMDKAEAK FRHAKERREK ENLKASRSRE GDHTENYDSR
501: ERELREKQVR LDRERAEREA EMEKAQEREK EEREREQKRI ERERERLVAR QAVERATREA RERAATEAHA KVQRAAVGKA TDARERAERA AVQRAHAEAR
601: ERAAAGARDK AAKAAAEARE KAEKAAAEAK ERANAEAREK ETRVRAERAA VERAAAEARG RAAAQAKAKQ QQENTNDLDS FFSSISRPNS APRQRTNPLD
701: PFQDSWNKGG SFESSRESLR VPPGQPENLR KTSSVTNIVD DLSSIFGASA SQSGGFQDVD GETEERRRAR LERHQRTQER AAKALAEKNE RDLQVQREQV
801: EKDRIGVTLD VEIKRWGAGK EGNLRALLST LQYVLWPECG WQPVSLTDLI TAASVKKVYR KATLCIHPDK VQQKGANLQQ KYIAEKVFDM LKEAWNKFNS
901: EELF

Arabidopsis Description

AUXI1Auxilin-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU08]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.