Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400052312 | Potato | cytosol | 10.77 | 92.31 |
| AT4G12780.1 | Thale cress | nucleus | 93.27 | 91.92 |
| CDY31429 | Canola | plastid | 76.54 | 83.58 |
| Bra020913.1-P | Field mustard | nucleus | 76.99 | 82.06 |
| CDX76445 | Canola | nucleus | 76.66 | 81.89 |
| VIT_00s0188g00210.t01 | Wine grape | plastid | 10.89 | 59.88 |
| GSMUA_Achr2P02260_001 | Banana | nucleus | 16.61 | 53.43 |
| VIT_07s0031g02350.t01 | Wine grape | nucleus, plastid | 55.78 | 51.88 |
| PGSC0003DMT400071173 | Potato | nucleus | 53.65 | 50.1 |
| KRH40961 | Soybean | endoplasmic reticulum | 52.41 | 50.0 |
| KRH53945 | Soybean | nucleus, plastid | 51.29 | 49.57 |
| GSMUA_Achr3P24020_001 | Banana | nucleus | 44.22 | 49.37 |
| Solyc06g082840.2.1 | Tomato | nucleus | 53.31 | 49.33 |
| Solyc09g018960.2.1 | Tomato | nucleus | 50.84 | 49.19 |
| KRH63993 | Soybean | nucleus, plastid | 49.72 | 48.57 |
| HORVU5Hr1G024350.1 | Barley | plasma membrane | 40.07 | 48.37 |
| GSMUA_Achr11P... | Banana | nucleus | 50.06 | 48.06 |
| EES17168 | Sorghum | mitochondrion, nucleus | 48.15 | 47.83 |
| Os12t0548200-02 | Rice | plasma membrane | 49.49 | 47.68 |
| Zm00001d041647_P004 | Maize | nucleus | 47.14 | 47.51 |
| GSMUA_Achr1P26650_001 | Banana | nucleus | 46.46 | 47.15 |
| KRH59609 | Soybean | nucleus | 51.96 | 47.1 |
| TraesCS5D01G104700.2 | Wheat | nucleus | 46.46 | 46.57 |
| TraesCS5A01G092500.2 | Wheat | nucleus | 46.35 | 46.3 |
| TraesCS5B01G098600.2 | Wheat | nucleus | 46.13 | 46.08 |
| PGSC0003DMT400052311 | Potato | nucleus | 43.43 | 45.85 |
| Zm00001d023838_P014 | Maize | mitochondrion, nucleus | 44.78 | 44.19 |
| Os11t0661200-01 | Rice | nucleus | 42.54 | 42.68 |
| TraesCS4D01G145200.4 | Wheat | nucleus | 41.75 | 42.22 |
| AT1G21660.1 | Thale cress | nucleus | 24.58 | 41.87 |
| EES08933 | Sorghum | nucleus, plastid | 42.09 | 41.25 |
| Zm00001d007692_P003 | Maize | plasma membrane | 40.29 | 40.47 |
| TraesCS4A01G169200.1 | Wheat | nucleus | 41.86 | 39.51 |
| HORVU4Hr1G033280.4 | Barley | nucleus | 41.19 | 39.42 |
| TraesCS4B01G126200.1 | Wheat | nucleus | 40.63 | 38.76 |
| AT1G30280.1 | Thale cress | cytosol | 11.0 | 21.54 |
| AT4G36520.1 | Thale cress | nucleus, plastid | 26.26 | 16.46 |
| AT1G75100.1 | Thale cress | nucleus | 10.89 | 14.9 |
| AT1G75310.2 | Thale cress | nucleus | 24.02 | 14.75 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:22.1.6.4 | EntrezGene:826889 | ProteinID:AEE83177.1 | EMBL:AK228848 | ArrayExpress:AT4G12770 |
| EnsemblPlantsGene:AT4G12770 | RefSeq:AT4G12770 | TAIR:AT4G12770 | RefSeq:AT4G12770-TAIR-G | EnsemblPlants:AT4G12770.1 | TAIR:AT4G12770.1 |
| Unigene:At.3095 | ProteinID:CAB40994.1 | ProteinID:CAB78319.1 | ncoils:Coil | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006898 |
| GO:GO:0008150 | GO:GO:0009504 | GO:GO:0016020 | GO:GO:0031982 | GO:GO:0072583 | InterPro:IPR036869 |
| InterPro:J_dom_sf | RefSeq:NP_193013.2 | PO:PO:0000005 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0025195 |
| PO:PO:0025281 | PANTHER:PTHR23172 | PANTHER:PTHR23172:SF54 | UniProt:Q0WQ57 | SUPFAM:SSF46565 | UniParc:UPI0000DB531D |
| SEG:seg | : | : | : | : | : |
Description
Auxilin-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WQ57]
Coordinates
chr4:-:7506330..7511587
Molecular Weight (calculated)
98331.9 Da
IEP (calculated)
6.736
GRAVY (calculated)
-0.998
Length
891 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDFTGLLAR DFGLKPQGKS APMASQSNSS AADFNTFASS YSFASAAGKK SDSLPVFDDL GRDGDDLLFR DVFSGPPPKY GSSGDSRSPS APAFDYDVMF
101: KEPKSKSASS MPVYDKPVYD DEDVFESIPE LKIPSTSSQS ARFENVFSSI SSSPTKHRKQ NSSPFDDLMG NNLGKKESDR EEKGSSIFDD LIPGFGRTSS
201: PPAKRTTSET TSQSQKPPYR TAETSSNVKE DPFVVLEEST STLREPSTGG FTDPLEEIGK FNSRKTDHSS VHGGVFVDTD PLDSLGKSGP DMNSRGKSHL
301: RPPGNISGSQ SPVESSGLYH SKNVSFDDVV EPQNTSTPPP TNSDGSFESS DDVWLTVSEI PLFTQPTSAP PPTRPPPPRP TRPIKKKVNE PSIPTSAYHS
401: HVPSSGRASV NSPTASQMDE LDDFSIGRNQ TAANGYPDPS SGEDSDVFST AAASAAAMKD AMDKAEAKFR HAKERREKES LKASRSREGD HTENYDSRER
501: ELREKQVRLD RERAEREAEM EKTQAREREE REREQKRIER ERERLLARQA VERATREARE RAATEAHAKV QRAAVGKVTD ARERAERAAV QRAHAEARER
601: AAAGAREKAE KAAAEARERA NAEVREKEAK VRAERAAVER AAAEARGRAA AQAKAKQQQE NNNDLDSFFN SVSRPSSVPR QRTNPPDPFQ DSWNKGGSFE
701: SSRPSSRVPS GPTENLRKAS SATNIVDDLS SIFGAPASQS GGFQDVDGET EERRRARLER HQRTQERAAK ALAEKNERDL QVQREQAEKD RIGGTLDVEI
801: RRWGAGKEGN LRALLSTLQY VLWPECGWQP VSLTDLITGA SVKKVYRKAT LCIHPDKVQQ KGANLQQKYI AEKVFDMLKE AWNKFNSEEL F
101: KEPKSKSASS MPVYDKPVYD DEDVFESIPE LKIPSTSSQS ARFENVFSSI SSSPTKHRKQ NSSPFDDLMG NNLGKKESDR EEKGSSIFDD LIPGFGRTSS
201: PPAKRTTSET TSQSQKPPYR TAETSSNVKE DPFVVLEEST STLREPSTGG FTDPLEEIGK FNSRKTDHSS VHGGVFVDTD PLDSLGKSGP DMNSRGKSHL
301: RPPGNISGSQ SPVESSGLYH SKNVSFDDVV EPQNTSTPPP TNSDGSFESS DDVWLTVSEI PLFTQPTSAP PPTRPPPPRP TRPIKKKVNE PSIPTSAYHS
401: HVPSSGRASV NSPTASQMDE LDDFSIGRNQ TAANGYPDPS SGEDSDVFST AAASAAAMKD AMDKAEAKFR HAKERREKES LKASRSREGD HTENYDSRER
501: ELREKQVRLD RERAEREAEM EKTQAREREE REREQKRIER ERERLLARQA VERATREARE RAATEAHAKV QRAAVGKVTD ARERAERAAV QRAHAEARER
601: AAAGAREKAE KAAAEARERA NAEVREKEAK VRAERAAVER AAAEARGRAA AQAKAKQQQE NNNDLDSFFN SVSRPSSVPR QRTNPPDPFQ DSWNKGGSFE
701: SSRPSSRVPS GPTENLRKAS SATNIVDDLS SIFGAPASQS GGFQDVDGET EERRRARLER HQRTQERAAK ALAEKNERDL QVQREQAEKD RIGGTLDVEI
801: RRWGAGKEGN LRALLSTLQY VLWPECGWQP VSLTDLITGA SVKKVYRKAT LCIHPDKVQQ KGANLQQKYI AEKVFDMLKE AWNKFNSEEL F
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.