Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g018960.2.1 | Tomato | nucleus | 79.62 | 72.96 |
| PGSC0003DMT400071173 | Potato | nucleus | 70.38 | 62.26 |
| VIT_00s0188g00210.t01 | Wine grape | plastid | 9.12 | 47.53 |
| GSMUA_Achr2P02260_001 | Banana | nucleus | 15.52 | 47.29 |
| VIT_07s0031g02350.t01 | Wine grape | nucleus, plastid | 53.44 | 47.08 |
| KRH40961 | Soybean | endoplasmic reticulum | 51.3 | 46.36 |
| KRH53945 | Soybean | nucleus, plastid | 49.76 | 45.55 |
| KRH63993 | Soybean | nucleus, plastid | 48.82 | 45.18 |
| KRH59609 | Soybean | nucleus | 51.07 | 43.85 |
| CDY31429 | Canola | plastid | 42.3 | 43.75 |
| AT4G12770.1 | Thale cress | nucleus | 45.85 | 43.43 |
| CDX76445 | Canola | nucleus | 42.77 | 43.29 |
| Bra020913.1-P | Field mustard | nucleus | 42.65 | 43.06 |
| AT4G12780.1 | Thale cress | nucleus | 45.62 | 42.59 |
| GSMUA_Achr11P... | Banana | nucleus | 46.33 | 42.13 |
| Os12t0548200-02 | Rice | plasma membrane | 44.91 | 40.97 |
| EES17168 | Sorghum | mitochondrion, nucleus | 43.36 | 40.8 |
| Zm00001d041647_P004 | Maize | nucleus | 41.94 | 40.05 |
| TraesCS5D01G104700.2 | Wheat | nucleus | 42.06 | 39.93 |
| HORVU5Hr1G024350.1 | Barley | plasma membrane | 34.72 | 39.7 |
| TraesCS5A01G092500.2 | Wheat | nucleus | 41.82 | 39.57 |
| GSMUA_Achr3P24020_001 | Banana | nucleus | 37.32 | 39.47 |
| TraesCS5B01G098600.2 | Wheat | nucleus | 41.47 | 39.24 |
| Zm00001d023838_P014 | Maize | mitochondrion, nucleus | 41.71 | 38.98 |
| GSMUA_Achr1P26650_001 | Banana | nucleus | 40.28 | 38.72 |
| Os11t0661200-01 | Rice | nucleus | 37.09 | 35.25 |
| EES08933 | Sorghum | nucleus, plastid | 36.85 | 34.21 |
| Zm00001d007692_P003 | Maize | plasma membrane | 35.31 | 33.6 |
| TraesCS4D01G145200.4 | Wheat | nucleus | 34.95 | 33.48 |
| TraesCS4B01G126200.1 | Wheat | nucleus | 34.83 | 31.48 |
| HORVU4Hr1G033280.4 | Barley | nucleus | 34.6 | 31.36 |
| TraesCS4A01G169200.1 | Wheat | nucleus | 34.36 | 30.72 |
| PGSC0003DMT400030755 | Potato | nucleus | 5.45 | 23.71 |
| PGSC0003DMT400009048 | Potato | nucleus | 20.97 | 12.27 |
| PGSC0003DMT400009477 | Potato | nucleus | 19.43 | 10.31 |
| PGSC0003DMT400071606 | Potato | nucleus | 6.64 | 9.95 |
| PGSC0003DMT400071608 | Potato | nucleus | 6.99 | 8.45 |
| PGSC0003DMT400052312 | Potato | cytosol | 0.36 | 2.88 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400052311 | EnsemblPlantsGene:PGSC0003DMG401020301 | ncoils:Coil | PANTHER:PTHR23172 | PANTHER:PTHR23172:SF54 | PGSC:PGSC0003DMG401020301 |
| SEG:seg | UniParc:UPI0002949443 | UniProt:M1BT63 | MapMan:22.1.6.4 | : | : |
Description
Auxilin [Source:PGSC_GENE;Acc:PGSC0003DMG401020301]
Coordinates
chr9:+:35999710..36005933
Molecular Weight (calculated)
92885.8 Da
IEP (calculated)
5.115
GRAVY (calculated)
-1.030
Length
844 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDLDVLARD LGFRHAGKSA PMRSDVRSTS SSDPDAVLFN DVFGGPPKYT NTNNSADFNY DSIFISGKTN NNNDDNIKTS SFPVYDKPVY DDDIFDGLPG
101: VKNKSLSSSS TLRFEDDVFA TMTSPPQQNT HFDDLLGNFG RNEKVAQPKS SAGSTEFDDL LAGFGTGTSS RSFTDSTYPS KPAGDSNKSS SMLDDPFVVL
201: ESTLVPANSP PEEFSDPLEE IGKLGKSGMA KTGASSVSGG VFDDLDPLSG FDKPVCPLSH EKKTGGKDRI PSKAGAGRSD AHNSTSRENI ETPPFRYSES
301: HLQKKVPGDS FQESPHFNMP SEDPLRSLGE TAPPPYADND LHETNFQVDT SPRSEDQVQA SEDLWLTVSE IPLFTQPTSA PPPSRPPPPI PRRSSKSEAS
401: FSSSNARKGE GYSSSPNHYQ YSQSPKPVRP AVKSPPVSQL DELEDFARGW SKSSIDENAD ALSGEEMNGN SVAAASAAAM KEVMDRAEAK FRHAKEVRER
501: EYAKSAKSKE AVLLEKDEQA INEVQEREFR ENQERLENER RQWEKEEEER AQKKLERERE RARELEKERA RQAVERATRE ARERAAAGAR DRAAAETRLK
601: AERAAVEKVA AEARGRAEKA AVQRAQAEAR ERAAAEAKER AEKAAAEARE KEACEKASAV KAESEARRRA ERAAVERAAV EARERAAAEA RERAAAEVRE
701: RAAASARMNQ QRNDNDLESF FSMGRASSAP KTRTSTPDNI FDSQFQNKAG SEGPKSTAGV ASSNMRKASS TTSFVDDLSS IFGASASSGE FQDVEGETEE
801: RRRARLERHQ RTQERAAKAL AEKNQRDLQV QRDQDERHDR ANEQ
101: VKNKSLSSSS TLRFEDDVFA TMTSPPQQNT HFDDLLGNFG RNEKVAQPKS SAGSTEFDDL LAGFGTGTSS RSFTDSTYPS KPAGDSNKSS SMLDDPFVVL
201: ESTLVPANSP PEEFSDPLEE IGKLGKSGMA KTGASSVSGG VFDDLDPLSG FDKPVCPLSH EKKTGGKDRI PSKAGAGRSD AHNSTSRENI ETPPFRYSES
301: HLQKKVPGDS FQESPHFNMP SEDPLRSLGE TAPPPYADND LHETNFQVDT SPRSEDQVQA SEDLWLTVSE IPLFTQPTSA PPPSRPPPPI PRRSSKSEAS
401: FSSSNARKGE GYSSSPNHYQ YSQSPKPVRP AVKSPPVSQL DELEDFARGW SKSSIDENAD ALSGEEMNGN SVAAASAAAM KEVMDRAEAK FRHAKEVRER
501: EYAKSAKSKE AVLLEKDEQA INEVQEREFR ENQERLENER RQWEKEEEER AQKKLERERE RARELEKERA RQAVERATRE ARERAAAGAR DRAAAETRLK
601: AERAAVEKVA AEARGRAEKA AVQRAQAEAR ERAAAEAKER AEKAAAEARE KEACEKASAV KAESEARRRA ERAAVERAAV EARERAAAEA RERAAAEVRE
701: RAAASARMNQ QRNDNDLESF FSMGRASSAP KTRTSTPDNI FDSQFQNKAG SEGPKSTAGV ASSNMRKASS TTSFVDDLSS IFGASASSGE FQDVEGETEE
801: RRRARLERHQ RTQERAAKAL AEKNQRDLQV QRDQDERHDR ANEQ
001: MDDFTGLLAR DFGLKPQGKS APMASQSNSS AADFNTFASS YSFATAAGKK SDSLPVFDDP GRDGDDLLFK DVFSGPPPPK YGSSSGDSRS PSAPAFDYDA
101: MFKEPKSKSA SSMPVYDKPV YDDEDVFESI PELKIPSTSS QSARFENVFS SISSSPTKHR KQNSSPFDDL MGNNLGKKGA DSDREEKGSS IFDDLIPGFG
201: RTSSPPSKRT TSETTNQSEK APYRTAETSS NVEEDPFVVL EESESTPREP SRTDPLDDIG KFNSRKTDHS SVHGGVFVDI DPLDNLGKPG PDMNSKGKSH
301: LRPPGNISGS QSPPVESPGS YHSKKVSFED FLEPHNMSTP PPTNSNGSFE SSDDVWLTVS EIPLFTQPTS APPPTRPPPP RPTRPIKKKV NEPSIPTSAY
401: HSHVPSSGRA SVNSPTASQM DELDDFSIGR NQTAANGYPD PSSGEDSDVF STAAASAAAM KDAMDKAEAK FRHAKERREK ENLKASRSRE GDHTENYDSR
501: ERELREKQVR LDRERAEREA EMEKAQEREK EEREREQKRI ERERERLVAR QAVERATREA RERAATEAHA KVQRAAVGKA TDARERAERA AVQRAHAEAR
601: ERAAAGARDK AAKAAAEARE KAEKAAAEAK ERANAEAREK ETRVRAERAA VERAAAEARG RAAAQAKAKQ QQENTNDLDS FFSSISRPNS APRQRTNPLD
701: PFQDSWNKGG SFESSRESLR VPPGQPENLR KTSSVTNIVD DLSSIFGASA SQSGGFQDVD GETEERRRAR LERHQRTQER AAKALAEKNE RDLQVQREQV
801: EKDVSFLTT
101: MFKEPKSKSA SSMPVYDKPV YDDEDVFESI PELKIPSTSS QSARFENVFS SISSSPTKHR KQNSSPFDDL MGNNLGKKGA DSDREEKGSS IFDDLIPGFG
201: RTSSPPSKRT TSETTNQSEK APYRTAETSS NVEEDPFVVL EESESTPREP SRTDPLDDIG KFNSRKTDHS SVHGGVFVDI DPLDNLGKPG PDMNSKGKSH
301: LRPPGNISGS QSPPVESPGS YHSKKVSFED FLEPHNMSTP PPTNSNGSFE SSDDVWLTVS EIPLFTQPTS APPPTRPPPP RPTRPIKKKV NEPSIPTSAY
401: HSHVPSSGRA SVNSPTASQM DELDDFSIGR NQTAANGYPD PSSGEDSDVF STAAASAAAM KDAMDKAEAK FRHAKERREK ENLKASRSRE GDHTENYDSR
501: ERELREKQVR LDRERAEREA EMEKAQEREK EEREREQKRI ERERERLVAR QAVERATREA RERAATEAHA KVQRAAVGKA TDARERAERA AVQRAHAEAR
601: ERAAAGARDK AAKAAAEARE KAEKAAAEAK ERANAEAREK ETRVRAERAA VERAAAEARG RAAAQAKAKQ QQENTNDLDS FFSSISRPNS APRQRTNPLD
701: PFQDSWNKGG SFESSRESLR VPPGQPENLR KTSSVTNIVD DLSSIFGASA SQSGGFQDVD GETEERRRAR LERHQRTQER AAKALAEKNE RDLQVQREQV
801: EKDVSFLTT
Arabidopsis Description
AUXI1Auxilin-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU08]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.