CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 3
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53945	Soybean	nucleus, plastid	90.79	89.8
PGSC0003DMT400052312	Potato	cytosol	10.09	88.46
KRG89681	Soybean	extracellular, golgi	6.69	72.62
KRH40961	Soybean	endoplasmic reticulum	72.59	70.88
KRH59609	Soybean	nucleus	73.25	67.96
VIT_00s0188g00210.t01	Wine grape	plastid	11.62	65.43
GSMUA_Achr2P02260_001	Banana	nucleus	17.54	57.76
VIT_07s0031g02350.t01	Wine grape	nucleus, plastid	58.33	55.53
Solyc09g018960.2.1	Tomato	nucleus	53.07	52.55
CDY31429	Canola	plastid	46.93	52.45
GSMUA_Achr11P...	Banana	nucleus	53.29	52.37
PGSC0003DMT400071173	Potato	nucleus	54.06	51.68
Solyc06g082840.2.1	Tomato	nucleus	54.28	51.4
CDX76445	Canola	nucleus	46.93	51.32
Bra020913.1-P	Field mustard	nucleus	47.04	51.32
HORVU5Hr1G024350.1	Barley	plasma membrane	41.01	50.68
EES17168	Sorghum	mitochondrion, nucleus	49.56	50.39
Zm00001d041647_P004	Maize	nucleus	48.68	50.23
GSMUA_Achr3P24020_001	Banana	nucleus	43.75	50.0
Os12t0548200-02	Rice	plasma membrane	50.55	49.84
AT4G12770.1	Thale cress	nucleus	48.57	49.72
TraesCS5D01G104700.2	Wheat	nucleus	48.25	49.49
AT4G12780.1	Thale cress	nucleus	49.01	49.45
TraesCS5A01G092500.2	Wheat	nucleus	48.36	49.44
GSMUA_Achr1P26650_001	Banana	nucleus	47.37	49.2
PGSC0003DMT400052311	Potato	nucleus	45.18	48.82
TraesCS5B01G098600.2	Wheat	nucleus	47.7	48.77
Zm00001d023838_P014	Maize	mitochondrion, nucleus	48.14	48.62
KRH64620	Soybean	nucleus	26.1	46.03
KRH53284	Soybean	nucleus	25.99	45.93
Os11t0661200-01	Rice	nucleus	44.63	45.83
EES08933	Sorghum	nucleus, plastid	44.96	45.1
Zm00001d007692_P003	Maize	plasma membrane	43.31	44.53
TraesCS4D01G145200.4	Wheat	nucleus	42.65	44.15
HORVU4Hr1G033280.4	Barley	nucleus	42.43	41.57
TraesCS4A01G169200.1	Wheat	nucleus	42.21	40.78
TraesCS4B01G126200.1	Wheat	nucleus	41.45	40.47
KRH12827	Soybean	nucleus	11.84	23.18
KRH37791	Soybean	nucleus	11.4	22.22
KRH44795	Soybean	nucleus	10.75	21.63
KRH58698	Soybean	nucleus	10.96	21.51
KRH42596	Soybean	nucleus	10.96	21.01
KRH76753	Soybean	nucleus	27.41	17.81
KRH28713	Soybean	nucleus	26.86	17.65
KRH69887	Soybean	nucleus	27.63	17.5
KRH61195	Soybean	nucleus	11.73	16.9
KRH70946	Soybean	nucleus	24.56	16.89
KRH75084	Soybean	nucleus	24.45	16.67
KRH51877	Soybean	nucleus	12.39	15.69
KRH08235	Soybean	nucleus	8.0	9.1

Protein Annotations

EMBL:ACUP02002734	EnsemblPlants:KRH63993	EnsemblPlantsGene:GLYMA_04G209400	EntrezGene:100814144	Gene3D:1.10.287.110	GO:GO:0005575
GO:GO:0006810	GO:GO:0006898	GO:GO:0008150	GO:GO:0031982	InterPro:IPR036869	InterPro:J_dom_sf
ncoils:Coil	PANTHER:PTHR23172	PANTHER:PTHR23172:SF54	ProteinID:KRH63993	ProteinID:KRH63993.1	SEG:seg
SUPFAM:SSF46565	UniParc:UPI0002949085	UniProt:K7KLE6	MapMan:22.1.6.4	:	:

Description

hypothetical protein

Coordinates

chr4:-:48147861..48156473

Molecular Weight (calculated)

100661.0 Da

IEP (calculated)

5.589

GRAVY (calculated)

-0.922

Length

912 amino acids

Sequence
(BLAST)

001: MNDFDGLLAT DFGFKPQGKS APMAASKVSS NNKTSSLNFD LGSRSTRTSN SSVNAAAAAA SFDDLFGDSS VFRASADFRS KSVNVPVHDG PVFDKPVYDD
101: DDDIFDGVPG LKSSSKVSYD DVFAPGGSAA AAAAFDDLLG RLGKSEKVEK GAADFDDLIP GFRSSKASTD GTIPDINLSP EPTIDASKTA SSTTDDPFKV
201: FESTSAPVDS SSDYFTDPLE EISKFTSSRS TKNDRSSNSN GEVYDDIDPF GGLGNSVPAF SAERNSMKGS SSPTPRSNTS SSWTRDKESN DISSVRSPDR
301: KTPNKILVDH DQEFHQAAFD MPTYSSDSYK PVGQRSTFPS YDNNGFKQAN TLEDMSPKYE EKLESNDDIW LMVSEIPLFT QPTAAPPPSR PPPPRPVHIL
401: KSGAGSSASA NVRKKDNDFS YFPSSTQFSQ GPKSAPAAAK FSSASQFDEL EDFAMGKSRD NDDEGVNGLA DKELEMNSAA AAMKEAMDRA EAKFRHAKGV
501: RERENTKVAK SKEPVQLDKD GKVVSEDRGK QERLDHEWQQ KEREEKEQRR CEKEREEKER EQQRLERERE RARQAVERAT REARERAAAE ARQRAERAAV
601: EKANAEARKR AERTAVQRAQ AEARERAAAE AKEREVRERA AAARAEPEAR VKAERAAVER AAAEARERAV AQARERAAAA ARMSQQQNDN DLESFFSTDA
701: RANSAPRPPR PSSSDSVFDA QFQSDVTRKS TGVSSSMKKA SSSTNIVDDL SSIFGAAPSS SGEFQEIEGE TEERRRARLE RHQRTQERAA KALAEKNQRD
801: LQTQRDQAER HRVAETLDFE IKRWAAGKVG NLRALLSTLQ YVLWPECGWQ PVSLTDLITA AAVRKVYRKA TLCTHPDKVQ QKGATIQQKY IAEKVFDLLK
901: EAWNKFNSEE LF

Best Arabidopsis Sequence Match ( AT4G12770.1 )
(BLAST)

001: MDDFTGLLAR DFGLKPQGKS APMASQSNSS AADFNTFASS YSFASAAGKK SDSLPVFDDL GRDGDDLLFR DVFSGPPPKY GSSGDSRSPS APAFDYDVMF
101: KEPKSKSASS MPVYDKPVYD DEDVFESIPE LKIPSTSSQS ARFENVFSSI SSSPTKHRKQ NSSPFDDLMG NNLGKKESDR EEKGSSIFDD LIPGFGRTSS
201: PPAKRTTSET TSQSQKPPYR TAETSSNVKE DPFVVLEEST STLREPSTGG FTDPLEEIGK FNSRKTDHSS VHGGVFVDTD PLDSLGKSGP DMNSRGKSHL
301: RPPGNISGSQ SPVESSGLYH SKNVSFDDVV EPQNTSTPPP TNSDGSFESS DDVWLTVSEI PLFTQPTSAP PPTRPPPPRP TRPIKKKVNE PSIPTSAYHS
401: HVPSSGRASV NSPTASQMDE LDDFSIGRNQ TAANGYPDPS SGEDSDVFST AAASAAAMKD AMDKAEAKFR HAKERREKES LKASRSREGD HTENYDSRER
501: ELREKQVRLD RERAEREAEM EKTQAREREE REREQKRIER ERERLLARQA VERATREARE RAATEAHAKV QRAAVGKVTD ARERAERAAV QRAHAEARER
601: AAAGAREKAE KAAAEARERA NAEVREKEAK VRAERAAVER AAAEARGRAA AQAKAKQQQE NNNDLDSFFN SVSRPSSVPR QRTNPPDPFQ DSWNKGGSFE
701: SSRPSSRVPS GPTENLRKAS SATNIVDDLS SIFGAPASQS GGFQDVDGET EERRRARLER HQRTQERAAK ALAEKNERDL QVQREQAEKD RIGGTLDVEI
801: RRWGAGKEGN LRALLSTLQY VLWPECGWQP VSLTDLITGA SVKKVYRKAT LCIHPDKVQQ KGANLQQKYI AEKVFDMLKE AWNKFNSEEL F

Arabidopsis Description

Auxilin-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WQ57]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.