Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH64620 | Soybean | nucleus | 93.6 | 93.42 |
| KRG89681 | Soybean | extracellular, golgi | 14.53 | 89.29 |
| PGSC0003DMT400030755 | Potato | nucleus | 22.09 | 58.76 |
| CDX88363 | Canola | cytosol | 23.84 | 51.46 |
| Bra015674.1-P | Field mustard | cytosol | 26.16 | 44.41 |
| CDX87523 | Canola | cytosol | 26.16 | 44.12 |
| CDY04660 | Canola | cytosol | 40.89 | 44.05 |
| CDY01318 | Canola | cytosol | 42.05 | 42.22 |
| Bra017937.1-P | Field mustard | nucleus | 39.73 | 42.09 |
| CDY00396 | Canola | nucleus | 42.64 | 41.98 |
| CDY08188 | Canola | nucleus | 39.53 | 41.89 |
| Bra012290.1-P | Field mustard | cytosol | 41.67 | 41.75 |
| AT1G21660.1 | Thale cress | nucleus | 42.05 | 41.49 |
| VIT_18s0001g01980.t01 | Wine grape | cytosol | 40.31 | 40.31 |
| Solyc06g060090.2.1 | Tomato | nucleus | 33.53 | 35.52 |
| KRH53945 | Soybean | nucleus, plastid | 46.71 | 26.14 |
| KRH63993 | Soybean | nucleus, plastid | 45.93 | 25.99 |
| KRH40961 | Soybean | endoplasmic reticulum | 46.51 | 25.7 |
| KRH59609 | Soybean | nucleus | 46.51 | 24.42 |
| Os01t0355500-02 | Rice | nucleus | 39.53 | 21.52 |
| OQU86832 | Sorghum | nucleus | 39.15 | 21.06 |
| KRH12827 | Soybean | nucleus | 16.86 | 18.67 |
| KRH37791 | Soybean | nucleus | 16.86 | 18.59 |
| KRH58698 | Soybean | nucleus | 15.31 | 16.99 |
| Zm00001d040795_P002 | Maize | cytosol | 30.23 | 16.98 |
| KRH42596 | Soybean | nucleus | 15.31 | 16.6 |
| KRH44795 | Soybean | nucleus | 14.34 | 16.34 |
| KRH61195 | Soybean | nucleus | 17.05 | 13.9 |
| KRH51877 | Soybean | nucleus | 17.25 | 12.36 |
| KRH28713 | Soybean | nucleus | 24.22 | 9.01 |
| KRH76753 | Soybean | nucleus | 24.03 | 8.83 |
| KRH70946 | Soybean | nucleus | 22.67 | 8.82 |
| KRH75084 | Soybean | nucleus | 22.67 | 8.74 |
| KRH69887 | Soybean | nucleus | 24.03 | 8.61 |
| KRH08235 | Soybean | nucleus | 5.04 | 3.24 |
Protein Annotations
| EMBL:ACUP02003458 | EnsemblPlants:KRH53284 | EnsemblPlantsGene:GLYMA_06G116500 | EntrezGene:100792918 | Gene3D:1.10.287.110 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0006898 | GO:GO:0008150 | GO:GO:0031982 | InterPro:IPR036869 | InterPro:J_dom_sf |
| ncoils:Coil | PANTHER:PTHR23172 | PANTHER:PTHR23172:SF51 | ProteinID:KRH53284 | ProteinID:KRH53284.1 | SEG:seg |
| SUPFAM:SSF46565 | UniParc:UPI0002339313 | UniProt:I1KAD6 | MapMan:22.1.6.4 | : | : |
Description
hypothetical protein
Coordinates
chr6:-:9481209..9486000
Molecular Weight (calculated)
56055.5 Da
IEP (calculated)
9.451
GRAVY (calculated)
-0.712
Length
516 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEFGVLTEK FGLKPQGKSA PMARAKRPPN VADSQTRPNP KFPLNGSPSH QNSTFDFDYG VFSNSNTDNK TQRFDDIFGG NAKSNGASFD YDSIFAGSNT
101: PVSTSSYVDD IFGGIHGKSV GVDDLLDKIG GLNTNAKSPN AKSPAFDDLI PGFGVSNNGV GMNNPSVTPN KPAAAAAASH DDPFLIFETA SSSPSSESFL
201: DALEQISKLN NSKGTKGGSP SLKSPPKPMS KVNSLSVSTI DELEDFAMGG TQTNASSRKA NVKAAETKQN LAARMNNGKR VPAAKVNQAN GVDDLESFFS
301: MGSRSSSVPK SRTPTMDRMY DNQMKNKGKP EVSPRVPSRS SANVNKSPVM TSLDDLSLMF GGSPSSEFQE VEGETEERRK ARLGRHQRAQ ERALKAVNDM
401: NQRDLQTKME QEERRKIADT ADVQIKRWAA GKEGNMRALL STLQYVLWPE CGWQPVSLTD MITSSAVKKV YRKANLCIHP DKVQQKGATL EQKYTAEKVF
501: DILKEAYTKF NAEELS
101: PVSTSSYVDD IFGGIHGKSV GVDDLLDKIG GLNTNAKSPN AKSPAFDDLI PGFGVSNNGV GMNNPSVTPN KPAAAAAASH DDPFLIFETA SSSPSSESFL
201: DALEQISKLN NSKGTKGGSP SLKSPPKPMS KVNSLSVSTI DELEDFAMGG TQTNASSRKA NVKAAETKQN LAARMNNGKR VPAAKVNQAN GVDDLESFFS
301: MGSRSSSVPK SRTPTMDRMY DNQMKNKGKP EVSPRVPSRS SANVNKSPVM TSLDDLSLMF GGSPSSEFQE VEGETEERRK ARLGRHQRAQ ERALKAVNDM
401: NQRDLQTKME QEERRKIADT ADVQIKRWAA GKEGNMRALL STLQYVLWPE CGWQPVSLTD MITSSAVKKV YRKANLCIHP DKVQQKGATL EQKYTAEKVF
501: DILKEAYTKF NAEELS
001: MDEFGVLTER YGIKPQGKSA PMAASKRNPN NNGQSWNFGT GSSGLNAKST SFSSNSSWNK DSTNGSLFDG DDIFFPANST NRKVSNDFDV FAGLNKSSSS
101: GDNSKSSLND DLFFSNFGNP GKTTPSSADD LFGGVIPGSK SSDSVKNDDL FGSFSSSEKQ YAAAVDDLLG LGKNEAGYDG LIPGFGGSTQ TTSSKTTPSN
201: FDATDPFVVL ESTTSTGLFV DPLEEFAATV SSQGIKPSNT SHTSTKLKPP PKPTQKVNRG KSVGMSSIDE LEDFAMGTMR RSASASDTAS KYREAEDAAT
301: KNKQFGVDDL DSFFSARSSS VPKSRTTTET TRKQASNAPK KTPNGVSNAK KPPAPANLVD DFSALFGEDP IFRQFEEIPG ESEERRKARW DREQRTKSRV
401: AQAVADMNNR DHQSRIEQEQ RTRISETVDT EIRRWATGKE GNMRALLSSL HIVLWPGCGW EAVSITDLIT SSAVKKVYRK ATLYVHPDKV QQKGATLEQK
501: YIAEKVFDIL KEAWNKFNKE ELS
101: GDNSKSSLND DLFFSNFGNP GKTTPSSADD LFGGVIPGSK SSDSVKNDDL FGSFSSSEKQ YAAAVDDLLG LGKNEAGYDG LIPGFGGSTQ TTSSKTTPSN
201: FDATDPFVVL ESTTSTGLFV DPLEEFAATV SSQGIKPSNT SHTSTKLKPP PKPTQKVNRG KSVGMSSIDE LEDFAMGTMR RSASASDTAS KYREAEDAAT
301: KNKQFGVDDL DSFFSARSSS VPKSRTTTET TRKQASNAPK KTPNGVSNAK KPPAPANLVD DFSALFGEDP IFRQFEEIPG ESEERRKARW DREQRTKSRV
401: AQAVADMNNR DHQSRIEQEQ RTRISETVDT EIRRWATGKE GNMRALLSSL HIVLWPGCGW EAVSITDLIT SSAVKKVYRK ATLYVHPDKV QQKGATLEQK
501: YIAEKVFDIL KEAWNKFNKE ELS
Arabidopsis Description
At1g21660 [Source:UniProtKB/TrEMBL;Acc:Q9XI12]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.