CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH37791	Soybean	nucleus	93.99	93.59
KRH58698	Soybean	nucleus	75.54	75.7
KRH44795	Soybean	nucleus	72.53	74.61
KRH42596	Soybean	nucleus	73.82	72.27
VIT_10s0003g04050.t01	Wine grape	nucleus	62.66	60.08
KRG89681	Soybean	extracellular, golgi	9.01	50.0
Bra010780.1-P	Field mustard	nucleus	39.7	44.26
CDX90242	Canola	nucleus	39.7	44.26
Bra014876.1-P	Field mustard	nucleus	40.56	43.55
CDX77599	Canola	nucleus	40.56	43.45
CDX98192	Canola	nucleus	39.7	42.92
AT1G30280.1	Thale cress	cytosol	41.85	42.86
CDY26275	Canola	cytosol	39.48	42.49
Bra032375.1-P	Field mustard	cytosol	39.48	42.49
CDY70725	Canola	nucleus	39.06	42.33
CDY54130	Canola	cytosol	25.11	41.94
CDY21468	Canola	cytosol	28.54	38.89
KRH53284	Soybean	nucleus	18.67	16.86
KRH64620	Soybean	nucleus	18.67	16.83
KRH61195	Soybean	nucleus	20.6	15.17
KRH51877	Soybean	nucleus	21.24	13.75
KRH53945	Soybean	nucleus, plastid	25.11	12.69
KRH40961	Soybean	endoplasmic reticulum	23.82	11.88
KRH63993	Soybean	nucleus, plastid	23.18	11.84
KRH59609	Soybean	nucleus	23.82	11.29
KRH75084	Soybean	nucleus	23.82	8.3
KRH69887	Soybean	nucleus	25.11	8.12
KRH70946	Soybean	nucleus	22.96	8.07
KRH28713	Soybean	nucleus	23.18	7.78
KRH76753	Soybean	nucleus	22.96	7.62
KRH08235	Soybean	nucleus	8.37	4.86

Protein Annotations

EMBL:ACUP02009404	EnsemblPlants:KRH12827	EnsemblPlantsGene:GLYMA_15G197100	EntrezGene:100801416	Gene3D:1.10.287.110	GO:GO:0005575
GO:GO:0006810	GO:GO:0006898	GO:GO:0008150	GO:GO:0031982	InterPro:DnaJ_domain	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR23172	PANTHER:PTHR23172:SF39	ProteinID:KRH12827	ProteinID:KRH12827.1
SEG:seg	SUPFAM:SSF46565	UniParc:UPI000233B186	UniProt:I1MHW5	MapMan:22.1.6.4	:

Description

hypothetical protein

Coordinates

chr15:+:22896637..22900430

Molecular Weight (calculated)

52102.2 Da

IEP (calculated)

4.927

GRAVY (calculated)

-0.700

Length

466 amino acids

Sequence
(BLAST)

001: MDESWRMRMG LTRGLPRRRS MEDRSSARTR RSIFAGAAEP ETLDPDDFAD VFGGPPRSLL VHKFSRSNSF YEEIFRPPEF ASPAPAKGSR SLPVFRIPAK
101: NEAFYSDIFG SDDDRRSRER SGPQSKAKSK SNSSSALSSE ELSPLRTAVG DDVALSAFAS KLRPINVPCR WNSTTMMPGE HPIKQGGPLF PCNSQSFEIQ
201: FQDNEYKESF KSSHLGFSRR VSSPETISLE SNSYQSMKVS ADDWEISSPF SAVSGLCQEP EAKSSVHDHL FPELVIEQDD DDDEVMSSYV IEVNSNLREE
301: SCGTADLDEA IAWAKEKFQS RNSDEESSSR NEGNEQATTG VEGRSDAGEC HGDGIGEVKS SKVQTETEKL DRDIRSWSSG KETDIRLLLS TLHHILWPES
401: GWYAVPLPNL IESSQVKKAY QKARLCLHPD KLQQRGATFL QKYIAEKAFS ILQDAWTAFI SEDVSF

Best Arabidopsis Sequence Match ( AT1G30280.1 )
(BLAST)

001: MDESWRMKMG LSVDPFFSIA RKSMDARIDA EDFADVFGGP PRSVLTRKFS GDFSRSDCFY DEIFQPPGTF SSGGSLASSK SHGRNLPAFR IPSGGEGFYD
101: GVFGGRGGSA KEGSKKQSSM TKPRSNSSSM LSSEEASPHY PPPAAASGDD SGFSSFTSRL RPLNVPSRSH KRESKKQSFS AVPKAKDSFS GQNNTPEKAD
201: FYYKKTHFGG SRRASPETIS LDPNSFRRMD DYGPSSPASS PVSSFICEEE DDNTHAKQRT NRDCKVEEVV VEDEEDEEEE EMSSYVIEIN SDRFDRYREE
301: GGGGGGNSDS NDMDEAIAWA KERSQRPEAK QTEEDVIDSR RSEEEPKSEE EMEMEMKDEE IRIWLTGKET NIRLLLSTLH HVLWSNSNWD SIPLANLRDG
401: SQVKKAYQRA RLCLHPDKLQ QRGGTSPIQK SVASRVFAIL QEAWAVYVTN EGLSS

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C752]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.