Factsheet for Bra032375.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26275	Canola	cytosol	99.54	99.54
CDY21468	Canola	cytosol	74.83	94.74
CDY54130	Canola	cytosol	55.89	86.74
Bra014876.1-P	Field mustard	nucleus	80.83	80.65
Bra010780.1-P	Field mustard	nucleus	77.6	80.38
AT1G30280.1	Thale cress	cytosol	82.45	78.46
KRH37791	Soybean	nucleus	43.42	40.17
KRH12827	Soybean	nucleus	42.49	39.48
VIT_10s0003g04050.t01	Wine grape	nucleus	44.11	39.3
KRH58698	Soybean	nucleus	41.34	38.49
KRH44795	Soybean	nucleus	39.72	37.97
KRH42596	Soybean	nucleus	41.11	37.4
Bra015674.1-P	Field mustard	cytosol	13.39	19.08
Bra017937.1-P	Field mustard	nucleus	14.78	13.14
Bra012290.1-P	Field mustard	cytosol	14.55	12.23
Bra015866.1-P	Field mustard	nucleus	17.78	12.07
Bra020913.1-P	Field mustard	nucleus	20.79	10.77
Bra011688.1-P	Field mustard	nucleus	21.94	7.59
Bra015852.1-P	Field mustard	nucleus	21.02	6.13

Protein Annotations

EnsemblPlants:Bra032375.1	EnsemblPlants:Bra032375.1-P	EnsemblPlantsGene:Bra032375	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	ncoils:Coil	PANTHER:PTHR23172	PANTHER:PTHR23172:SF39	SEG:seg
SUPFAM:SSF46565	UniParc:UPI00025425BC	UniProt:M4EU93	MapMan:22.1.6.4	:	:

Description

AT1G30280 (E=8e-158) | heat shock protein binding

Coordinates

chrA09:+:22055465..22057123

Molecular Weight (calculated)

48734.3 Da

IEP (calculated)

5.105

GRAVY (calculated)

-0.885

Length

433 amino acids

Sequence
(BLAST)

001: MDESWRMKLG LNVDPFFSIA RRSMDVRIDA QDFSDVFGGP PRSVLTRKFS GDFSRSDCFY DEIFRPRGMF SCGALPSSKS HGRNLPAFRI PSGGDGFYDG
101: VFGGRSGTEK EGTKKQSPIT KSRSNSSPPP AGTSDDDAGI SSFTSTLRPL NVPSRSHKRE SKKQSFPVFP TSLSGQDLTP GKFDFCYRKP HFGSSRRSSP
201: ETMTLDPQSF RRMDDFGPSS PASSPVSSFI REDEYETEAK QRTTQDCKVE QEDDEDEMSS YVIEINSDRF DRYRDGGSGG GNSDSNDMDE AIAWARERSQ
301: RPETKQAQED LIDSRRSEEE EEEAKSEEEM EMEMKDEEIR IWLTGKETNI RLLLSTLHHV LWSNSNWQAI PLANLRDGSQ VKKAYQKARL CLHPDKLQQR
401: GGTSPLQKSV ASIVFSILQE AWSVYLTNEG LSS

Best Arabidopsis Sequence Match ( AT1G30280.1 )
(BLAST)

001: MDESWRMKMG LSVDPFFSIA RKSMDARIDA EDFADVFGGP PRSVLTRKFS GDFSRSDCFY DEIFQPPGTF SSGGSLASSK SHGRNLPAFR IPSGGEGFYD
101: GVFGGRGGSA KEGSKKQSSM TKPRSNSSSM LSSEEASPHY PPPAAASGDD SGFSSFTSRL RPLNVPSRSH KRESKKQSFS AVPKAKDSFS GQNNTPEKAD
201: FYYKKTHFGG SRRASPETIS LDPNSFRRMD DYGPSSPASS PVSSFICEEE DDNTHAKQRT NRDCKVEEVV VEDEEDEEEE EMSSYVIEIN SDRFDRYREE
301: GGGGGGNSDS NDMDEAIAWA KERSQRPEAK QTEEDVIDSR RSEEEPKSEE EMEMEMKDEE IRIWLTGKET NIRLLLSTLH HVLWSNSNWD SIPLANLRDG
401: SQVKKAYQRA RLCLHPDKLQ QRGGTSPIQK SVASRVFAIL QEAWAVYVTN EGLSS

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C752]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.