CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY54130	Canola	cytosol	62.87	77.06
CDY26275	Canola	cytosol	95.03	75.06
Bra032375.1-P	Field mustard	cytosol	94.74	74.83
CDX90242	Canola	nucleus	73.1	59.81
CDY70725	Canola	nucleus	74.56	59.3
CDX77599	Canola	nucleus	74.85	58.85
AT1G30280.1	Thale cress	cytosol	78.07	58.68
CDX98192	Canola	nucleus	73.1	58.0
KRH37791	Soybean	nucleus	40.35	29.49
KRH12827	Soybean	nucleus	38.89	28.54
KRH58698	Soybean	nucleus	38.3	28.17
KRH44795	Soybean	nucleus	36.55	27.59
VIT_10s0003g04050.t01	Wine grape	nucleus	39.18	27.57
KRH42596	Soybean	nucleus	38.01	27.31
CDX88363	Canola	cytosol	8.48	12.13
CDX87523	Canola	cytosol	7.89	8.82
CDY04660	Canola	cytosol	11.11	7.93
CDY08188	Canola	nucleus	11.11	7.8
CDX73142	Canola	nucleus	12.87	7.43
CDY45410	Canola	nucleus	12.87	7.41
CDY00396	Canola	nucleus	10.82	7.06
CDY31429	Canola	plastid	16.67	6.99
CDX76445	Canola	nucleus	16.96	6.95
CDY01318	Canola	cytosol	9.65	6.42
CDX69230	Canola	nucleus	18.13	5.09
CDX75581	Canola	nucleus	17.54	5.0
CDY59467	Canola	mitochondrion	14.04	4.85
CDX73162	Canola	nucleus	17.25	4.26
CDY45424	Canola	nucleus	16.96	4.04

Protein Annotations

EnsemblPlants:CDY21468	EnsemblPlantsGene:GSBRNA2T00015879001	Gene3D:1.10.287.110	InterPro:IPR036869	InterPro:J_dom_sf	ncoils:Coil
PANTHER:PTHR23172	PANTHER:PTHR23172:SF39	ProteinID:CDY21468	ProteinID:CDY21468.1	SEG:seg	SUPFAM:SSF46565
UniParc:UPI0004EF338D	UniProt:A0A078G9Q1	MapMan:35.2	:	:	:

Description

BnaC03g27290DBnaC03g27290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G9Q1]

Coordinates

chrLK032121:+:353074..354410

Molecular Weight (calculated)

38690.5 Da

IEP (calculated)

4.645

GRAVY (calculated)

-0.943

Length

342 amino acids

Sequence
(BLAST)

001: MDESWRMKLG LNVDPFFSIA RRSMDVRIDA QDFSDVFGGP PRSVLTRKFS GDFSRSDCFY DEIFRPRGMF SCGALPSSKS HGRNLPAFRI PSGGDGFYDG
101: VFGGRSGTEK EGTKKQSPIT KSRSNSSPPP AGTSDDDAGI SSFTSTLRKP HFGSSRRSSP ETMTLDPQSF RRMDDFGPSS PASSPVSSFI REDEYETEAK
201: QRTTQDCKVE QEDDEDEMSS YVIEINSDRF DRYRDGGSGG GNSDSNDMDE AIAWARERSQ RPETKQAQED LIDSRRSEEE EEEAKSEEEM EMEMKDEEIR
301: IWLTGKETNI RLLLSTLHHV RVFQIGYFVS DQVNRILIRT KP

Best Arabidopsis Sequence Match ( AT1G30280.1 )
(BLAST)

001: MDESWRMKMG LSVDPFFSIA RKSMDARIDA EDFADVFGGP PRSVLTRKFS GDFSRSDCFY DEIFQPPGTF SSGGSLASSK SHGRNLPAFR IPSGGEGFYD
101: GVFGGRGGSA KEGSKKQSSM TKPRSNSSSM LSSEEASPHY PPPAAASGDD SGFSSFTSRL RPLNVPSRSH KRESKKQSFS AVPKAKDSFS GQNNTPEKAD
201: FYYKKTHFGG SRRASPETIS LDPNSFRRMD DYGPSSPASS PVSSFICEEE DDNTHAKQRT NRDCKVEEVV VEDEEDEEEE EMSSYVIEIN SDRFDRYREE
301: GGGGGGNSDS NDMDEAIAWA KERSQRPEAK QTEEDVIDSR RSEEEPKSEE EMEMEMKDEE IRIWLTGKET NIRLLLSTLH HVLWSNSNWD SIPLANLRDG
401: SQVKKAYQRA RLCLHPDKLQ QRGGTSPIQK SVASRVFAIL QEAWAVYVTN EGLSS

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C752]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.