CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015866.1-P	Field mustard	nucleus	99.33	92.48
CDX73142	Canola	nucleus	89.39	89.7
AT1G75100.1	Thale cress	nucleus	72.05	65.75
CDY59467	Canola	mitochondrion	62.46	37.51
KRH61195	Soybean	nucleus	31.48	29.54
PGSC0003DMT400071608	Potato	nucleus	32.66	27.79
Solyc04g080040.2.1	Tomato	nucleus	32.32	26.52
Os03t0198300-02	Rice	nucleus	26.43	25.86
VIT_18s0001g12100.t01	Wine grape	nucleus	33.33	25.85
KRH51877	Soybean	nucleus	30.81	25.42
GSMUA_Achr7P25970_001	Banana	nucleus	28.62	24.6
EER95331	Sorghum	nucleus, plastid	24.07	24.28
TraesCS4B01G261900.1	Wheat	nucleus, plastid	25.93	24.14
TraesCS4A01G041000.2	Wheat	nucleus, plastid	25.76	24.09
Zm00001d048175_P002	Maize	nucleus	24.07	23.99
CDX88363	Canola	cytosol	9.6	23.85
TraesCS4D01G261900.1	Wheat	nucleus, plastid	25.76	23.79
HORVU4Hr1G070720.5	Barley	mitochondrion	25.25	22.09
PGSC0003DMT400071606	Potato	nucleus	20.37	21.49
CDX87523	Canola	cytosol	10.44	20.26
CDX77599	Canola	nucleus	13.13	17.93
CDX98192	Canola	nucleus	12.96	17.87
CDX90242	Canola	nucleus	12.46	17.7
CDY54130	Canola	cytosol	8.08	17.2
CDY70725	Canola	nucleus	12.29	16.98
CDY26275	Canola	cytosol	12.29	16.86
CDY04660	Canola	cytosol	11.95	14.82
CDY00396	Canola	nucleus	12.46	14.12
CDY01318	Canola	cytosol	12.12	14.01
CDY08188	Canola	nucleus	11.28	13.76
CDY21468	Canola	cytosol	7.41	12.87
CDX76445	Canola	nucleus	14.98	10.67
CDY31429	Canola	plastid	14.65	10.66
CDX69230	Canola	nucleus	13.97	6.81
CDX75581	Canola	nucleus	13.64	6.74
CDX73162	Canola	nucleus	15.32	6.57
CDY45424	Canola	nucleus	15.66	6.48

Protein Annotations

EnsemblPlants:CDY45410	EnsemblPlantsGene:GSBRNA2T00081921001	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623	InterPro:IPR036869
InterPro:J_dom_sf	ncoils:Coil	PANTHER:PTHR23172	PANTHER:PTHR23172:SF55	ProteinID:CDY45410	ProteinID:CDY45410.1
SEG:seg	SUPFAM:SSF46565	UniParc:UPI0004EDE663	UniProt:A0A078I3I0	MapMan:20.5.7	MapMan:22.1.6.4

Description

BnaA07g31900DBnaA07g31900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I3I0]

Coordinates

chrLK032624:-:131350..134449

Molecular Weight (calculated)

65047.8 Da

IEP (calculated)

8.782

GRAVY (calculated)

-0.850

Length

594 amino acids

Sequence
(BLAST)

001: MQTLPNSPPL LRHPAGDDDV DIDFRDVFGG PPKRRSKVIE TTGRHSFSEI RRRDVIVDNS ALILRDEKPV FGEDPSSIRL NESSSSSSPQ RKVKNEGETF
101: GSSLPGSRIL SPARPIPHKV ESPPGTSFPA QFSLPAKLIK GTEMPTFGSA ARSLSRNKEA ASSSPLSRTS SSADMVNSTA KPDSDGYVAP KVVNGKVRQF
201: HFSIYKWPNK GVPVAMWGTS RLSSMAKAEE TTPSDLRPTS FEAEGQSSQK RPGVQKEEEM SEQAFSSNVS KAPDEANVKP QHSFLDVKDE RQGEEIELEK
301: EERKGKSKAK SMRSHAGDSR SKKKAQGSRS SVDSPMPDNT SSYASASSAP EVGKDGAKGK VMDFVKIFSQ GASAGAGGEP LGQSSRWRAK EVPVTDTNKD
401: DAKAKETAKV PDQQKTSTPV TPAMDQDQKP SQATQKKVAD SSKPSGVTEQ EEKQEPSTAH VTSEDIDEPF HVNFLVEDIT QDENKMEETK NNAEEFQNID
501: AKIRKWSSGK SGNIRSLLST LQYILWPGCG WKAVPLMDMI EGNAVRKSYQ RALLILHPDK LQQKGASANQ KYMAEKVFEL LQEAWDHFNT LGPV

Best Arabidopsis Sequence Match ( AT1G75100.1 )
(BLAST)

001: MQTLPSSETV LLGSNSAPPV LRSPGGDDVD IDFGDVFGGP PKRRSKVTSN EVTRHSFSES ALRRRDVIVD VGDLLPQDEK PVFGEDTSSV RRRFTTDDFF
101: DDIFRVNESS SLPGSRILSP AHKPESSSGT SSPSQFSLPA KATEIPTFNL AATRSLNKNK ETVSSSPLSR TSSKADVVST AKSYSDDCDD PPQVFVTGKG
201: RQFHFSIYKW PNKGVPVVIW GSSRLSSMSK AEETTPVPLS DYRKTSVVEK LGKNEEGDGK SGLSGLKDVK KTSLKRPGVQ TKEEKTETDL KSEQAFFGVS
301: KAREANVKPL DSVESEQAFS GVSKAHEATT VKPLHSIFHE EDERQDEKIV SEREVRKGKS KAKNTRSFTE DSRTKKKSQG TKSSLDSSPI PDKSSFASSS
401: AAPEVGKDGV KGKVSDFVKI FSKGASVGAG GESLGQSSRW RAKETPKTDI IHDGSNAKET VNIPDQQKKS TPDIPAMNRD QKPSQSTQKK DSDRESMNYK
501: APGDTVQEER QEPSTTHTTS EDIDEPFHVN FDVEDITQDE NKMEEANKDA EEIKNIDAKI RKWSSGKSGN IRSLLSTLQY ILWSGSGWKP VPLMDMIEGN
601: AVRKSYQRAL LILHPDKLQQ KGASANQKYM AEKVFELLQE AWDHFNTLGP V

Arabidopsis Description

JAC1JAC1 [Source:UniProtKB/TrEMBL;Acc:A0A178WHU1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.