Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER95331 | Sorghum | nucleus, plastid | 86.58 | 87.61 |
| Os03t0198300-02 | Rice | nucleus | 66.95 | 65.73 |
| TraesCS4B01G261900.1 | Wheat | nucleus, plastid | 65.44 | 61.13 |
| TraesCS4A01G041000.2 | Wheat | nucleus, plastid | 64.26 | 60.31 |
| TraesCS4D01G261900.1 | Wheat | nucleus, plastid | 64.43 | 59.72 |
| HORVU4Hr1G070720.5 | Barley | mitochondrion | 62.92 | 55.23 |
| GSMUA_Achr7P25970_001 | Banana | nucleus | 38.76 | 33.43 |
| KRH61195 | Soybean | nucleus | 28.69 | 27.01 |
| VIT_18s0001g12100.t01 | Wine grape | nucleus | 32.05 | 24.93 |
| CDY45410 | Canola | nucleus | 23.99 | 24.07 |
| PGSC0003DMT400071608 | Potato | nucleus | 28.19 | 24.07 |
| CDX73142 | Canola | nucleus | 23.83 | 23.99 |
| Bra015866.1-P | Field mustard | nucleus | 25.0 | 23.35 |
| KRH51877 | Soybean | nucleus | 27.85 | 23.06 |
| AT1G75100.1 | Thale cress | nucleus | 25.17 | 23.04 |
| Solyc04g080040.2.1 | Tomato | nucleus | 27.52 | 22.65 |
| PGSC0003DMT400071606 | Potato | nucleus | 16.11 | 17.05 |
| CDY59467 | Canola | mitochondrion | 22.65 | 13.65 |
| Zm00001d041647_P004 | Maize | nucleus | 17.11 | 11.54 |
| Zm00001d023838_P014 | Maize | mitochondrion, nucleus | 16.95 | 11.18 |
| Zm00001d007692_P003 | Maize | plasma membrane | 16.28 | 10.94 |
| Zm00001d040795_P002 | Maize | cytosol | 10.74 | 6.96 |
| Zm00001d039120_P002 | Maize | nucleus | 17.62 | 6.91 |
| Zm00001d044121_P002 | Maize | nucleus | 14.77 | 5.56 |
Protein Annotations
| EnsemblPlants:Zm00001d048175_P002 | EnsemblPlants:Zm00001d048175_T002 | EnsemblPlantsGene:Zm00001d048175 | EntrezGene:100278637 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain |
| InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | PANTHER:PTHR23172 | PANTHER:PTHR23172:SF55 | ProteinID:AQL09049.1 |
| SEG:seg | SUPFAM:SSF46565 | UniParc:UPI0004DEA455 | UniProt:A0A1D6PIA1 | MapMan:20.5.7 | MapMan:22.1.6.4 |
Description
J domain-containing protein required for chloroplast accumulation response 1
Coordinates
chr9:-:151502807..151509935
Molecular Weight (calculated)
65778.2 Da
IEP (calculated)
6.895
GRAVY (calculated)
-0.790
Length
596 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGAPLRRSD LDFADVFGGP PRRVSGNEHR SQRGSQDTSS FESATRAGSG GPDTPVFGDR GSSDRRRQLG EEFYKDIFPG SEAASPRRSG AGDWGNVFGA
101: QASPVSTARP RSSFSIRFNR GMDSSMPTSP SQQMSNRNDD GTSYAYSVPT SPNASMNNYL AQGAARQDSK KNPFSWHRYP FLSRFRSQSG EKKSTSNHVS
201: SMDNEFEGTP VNLESIMANN KFHFSFYKWA GKGALLVLPA TAQEKSVDII GLRSFPQVVI QGIDLIDCED SMSTATGTAK NQTDYEDSKS GKHSANSATK
301: DGAIPLLFED YMQGTKQSND HTKNDVSSTT LSSKISRSPS GERSRSSRVK EKMKGFIKLF SPESSPKRKR APETQRQTSV GKNGTKTELH DKFSMSSLEA
401: SEDVETVQMN SQNAFTAEPF PMTEVQERLD KPVLTANSKM DTATGSNEAA SNEPIHDDTK DKAANTIEHE DIEDLDGCVV EHFSEDHVLH NDQEKELIKI
501: SEAKIREWSR GKEGNIRSLL STLQYVLWPE SGWKPVPLVD IIEGAAVKKA YQKALLCLHP DKLQQRGAAM HQKCIAEKVF DILQEAWKEF NSVTFG
101: QASPVSTARP RSSFSIRFNR GMDSSMPTSP SQQMSNRNDD GTSYAYSVPT SPNASMNNYL AQGAARQDSK KNPFSWHRYP FLSRFRSQSG EKKSTSNHVS
201: SMDNEFEGTP VNLESIMANN KFHFSFYKWA GKGALLVLPA TAQEKSVDII GLRSFPQVVI QGIDLIDCED SMSTATGTAK NQTDYEDSKS GKHSANSATK
301: DGAIPLLFED YMQGTKQSND HTKNDVSSTT LSSKISRSPS GERSRSSRVK EKMKGFIKLF SPESSPKRKR APETQRQTSV GKNGTKTELH DKFSMSSLEA
401: SEDVETVQMN SQNAFTAEPF PMTEVQERLD KPVLTANSKM DTATGSNEAA SNEPIHDDTK DKAANTIEHE DIEDLDGCVV EHFSEDHVLH NDQEKELIKI
501: SEAKIREWSR GKEGNIRSLL STLQYVLWPE SGWKPVPLVD IIEGAAVKKA YQKALLCLHP DKLQQRGAAM HQKCIAEKVF DILQEAWKEF NSVTFG
001: MQTLPSSETV LLGSNSAPPV LRSPGGDDVD IDFGDVFGGP PKRRSKVTSN EVTRHSFSES ALRRRDVIVD VGDLLPQDEK PVFGEDTSSV RRRFTTDDFF
101: DDIFRVNESS SLPGSRILSP AHKPESSSGT SSPSQFSLPA KATEIPTFNL AATRSLNKNK ETVSSSPLSR TSSKADVVST AKSYSDDCDD PPQVFVTGKG
201: RQFHFSIYKW PNKGVPVVIW GSSRLSSMSK AEETTPVPLS DYRKTSVVEK LGKNEEGDGK SGLSGLKDVK KTSLKRPGVQ TKEEKTETDL KSEQAFFGVS
301: KAREANVKPL DSVESEQAFS GVSKAHEATT VKPLHSIFHE EDERQDEKIV SEREVRKGKS KAKNTRSFTE DSRTKKKSQG TKSSLDSSPI PDKSSFASSS
401: AAPEVGKDGV KGKVSDFVKI FSKGASVGAG GESLGQSSRW RAKETPKTDI IHDGSNAKET VNIPDQQKKS TPDIPAMNRD QKPSQSTQKK DSDRESMNYK
501: APGDTVQEER QEPSTTHTTS EDIDEPFHVN FDVEDITQDE NKMEEANKDA EEIKNIDAKI RKWSSGKSGN IRSLLSTLQY ILWSGSGWKP VPLMDMIEGN
601: AVRKSYQRAL LILHPDKLQQ KGASANQKYM AEKVFELLQE AWDHFNTLGP V
101: DDIFRVNESS SLPGSRILSP AHKPESSSGT SSPSQFSLPA KATEIPTFNL AATRSLNKNK ETVSSSPLSR TSSKADVVST AKSYSDDCDD PPQVFVTGKG
201: RQFHFSIYKW PNKGVPVVIW GSSRLSSMSK AEETTPVPLS DYRKTSVVEK LGKNEEGDGK SGLSGLKDVK KTSLKRPGVQ TKEEKTETDL KSEQAFFGVS
301: KAREANVKPL DSVESEQAFS GVSKAHEATT VKPLHSIFHE EDERQDEKIV SEREVRKGKS KAKNTRSFTE DSRTKKKSQG TKSSLDSSPI PDKSSFASSS
401: AAPEVGKDGV KGKVSDFVKI FSKGASVGAG GESLGQSSRW RAKETPKTDI IHDGSNAKET VNIPDQQKKS TPDIPAMNRD QKPSQSTQKK DSDRESMNYK
501: APGDTVQEER QEPSTTHTTS EDIDEPFHVN FDVEDITQDE NKMEEANKDA EEIKNIDAKI RKWSSGKSGN IRSLLSTLQY ILWSGSGWKP VPLMDMIEGN
601: AVRKSYQRAL LILHPDKLQQ KGASANQKYM AEKVFELLQE AWDHFNTLGP V
Arabidopsis Description
JAC1JAC1 [Source:UniProtKB/TrEMBL;Acc:A0A178WHU1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.