Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0188g00150.t01 | Wine grape | cytosol | 4.86 | 93.48 |
| PGSC0003DMT400052312 | Potato | cytosol | 10.86 | 92.31 |
| EES17168 | Sorghum | mitochondrion, nucleus | 90.72 | 89.41 |
| Zm00001d023838_P014 | Maize | mitochondrion, nucleus | 87.9 | 86.05 |
| VIT_10s0116g01370.t01 | Wine grape | extracellular | 7.47 | 78.57 |
| Os12t0548200-02 | Rice | plasma membrane | 78.96 | 75.46 |
| HORVU5Hr1G024350.1 | Barley | plasma membrane | 60.07 | 71.95 |
| TraesCS5D01G104700.2 | Wheat | nucleus | 72.17 | 71.77 |
| TraesCS5A01G092500.2 | Wheat | nucleus | 72.4 | 71.75 |
| TraesCS5B01G098600.2 | Wheat | nucleus | 72.06 | 71.41 |
| VIT_00s0188g00210.t01 | Wine grape | plastid | 10.97 | 59.88 |
| Zm00001d007692_P003 | Maize | plasma membrane | 53.85 | 53.66 |
| GSMUA_Achr11P... | Banana | nucleus | 55.54 | 52.91 |
| KRH53945 | Soybean | nucleus, plastid | 52.15 | 50.0 |
| KRH40961 | Soybean | endoplasmic reticulum | 52.38 | 49.57 |
| KRH63993 | Soybean | nucleus, plastid | 50.23 | 48.68 |
| CDY31429 | Canola | plastid | 44.57 | 48.28 |
| GSMUA_Achr3P24020_001 | Banana | nucleus | 43.1 | 47.74 |
| VIT_07s0031g02350.t01 | Wine grape | nucleus, plastid | 51.58 | 47.6 |
| Bra020913.1-P | Field mustard | nucleus | 44.91 | 47.49 |
| CDX76445 | Canola | nucleus | 44.8 | 47.48 |
| Solyc09g018960.2.1 | Tomato | nucleus | 49.32 | 47.34 |
| AT4G12770.1 | Thale cress | nucleus | 47.51 | 47.14 |
| KRH59609 | Soybean | nucleus | 52.26 | 47.0 |
| AT4G12780.1 | Thale cress | nucleus | 47.51 | 46.46 |
| PGSC0003DMT400071173 | Potato | nucleus | 48.42 | 44.86 |
| Solyc06g082840.2.1 | Tomato | nucleus | 48.64 | 44.65 |
| PGSC0003DMT400052311 | Potato | nucleus | 40.05 | 41.94 |
| Zm00001d040795_P002 | Maize | cytosol | 36.54 | 35.15 |
| Zm00001d048175_P002 | Maize | nucleus | 11.54 | 17.11 |
| Zm00001d039120_P002 | Maize | nucleus | 28.39 | 16.51 |
| Zm00001d044121_P002 | Maize | nucleus | 26.13 | 14.6 |
Protein Annotations
| EnsemblPlants:Zm00001d041647_P004 | EnsemblPlants:Zm00001d041647_T004 | EnsemblPlantsGene:Zm00001d041647 | EntrezGene:103650566 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain |
| InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | ncoils:Coil | PANTHER:PTHR23172 | PANTHER:PTHR23172:SF53 |
| PFscan:PS50076 | ProteinID:ONM33432.1 | ProteinID:ONM33434.1 | SEG:seg | SUPFAM:SSF46565 | UniParc:UPI0004DEBF95 |
| UniProt:A0A1D6MXH6 | MapMan:22.1.6.4 | : | : | : | : |
Description
Auxilin-related protein 1
Coordinates
chr3:+:131547216..131554367
Molecular Weight (calculated)
98156.1 Da
IEP (calculated)
8.221
GRAVY (calculated)
-1.066
Length
884 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDFEGLLAR DFGLRPQGKA APMSAARSSG PSGSAWANTR SAAAPSYDEL FGSAPPLPKA TPSPSPSLDH IFDSFKEPAS TAPPPKPKHS SMPVFDKPVY
101: DDDIFVGVPG VKSSSARYDD VFGGSHSREA PPAFDDLLGG FGKSSQVREE VDDKRKQEAA MGPAAGTGFD YLIPGFGGRS SPRQRDTVGA KQQKISMSTS
201: KQPASLSDPF VVLETTSSSA HPFADPLDEF GKAAKYQGKS RESTNVGSNL FEDSSTSIQA PKSEPIFTSE VDNGLKDKNE SSRARDANPV QSFSKGNSSQ
301: QPSVEDFENI FSKPQSARYA DVHVDIGSDK YSGNGINDQS PRSDESEDEI WLTASEIPLF TQPTSAPPPS RPPPPLAAKQ KKHGSKSKRK DDEHLKQSRK
401: NNDHQRSSSN HAGVSTVDEL EDFAMGKPQS VHALNAEEFE RSTAAAASAA AMKEAMDKAE AKFKHAKEVR ERERDAKIRN REQREQDSVT RSYAQDREDK
501: ERKERLEQER EMKQNEEKER EQRRLEEERE LERHKERERA RQAVERATKE ARERAAVEAR AKAEREARQR SERAAVQRAQ QEARERAAVE AKERAERATA
601: EAKERAAAEG KEKAASQARD RAAAERAAVE RAQQEARKRA ERAAVERAAA EARERQAAAA RDKTSKPDDL ESFFGMGARA NSAPKQRAPT VDSMFHSQTQ
701: NRGSSTSTSM KKASSTTNIA DDLSAIFGGA PTSEEFQEVD GESEERRRAR MERHQRTRER AAKALAEKNE RDMQQQREQA ERHRLAETLD FEIKRWAAGK
801: EGNLRALLST LQYVLWPECG WQPVSLTDLI TAAAVKKVYR KATLCIHPDK VQQKGANLQQ KYIAEKVFDL LKEAWNKLNS EELF
101: DDDIFVGVPG VKSSSARYDD VFGGSHSREA PPAFDDLLGG FGKSSQVREE VDDKRKQEAA MGPAAGTGFD YLIPGFGGRS SPRQRDTVGA KQQKISMSTS
201: KQPASLSDPF VVLETTSSSA HPFADPLDEF GKAAKYQGKS RESTNVGSNL FEDSSTSIQA PKSEPIFTSE VDNGLKDKNE SSRARDANPV QSFSKGNSSQ
301: QPSVEDFENI FSKPQSARYA DVHVDIGSDK YSGNGINDQS PRSDESEDEI WLTASEIPLF TQPTSAPPPS RPPPPLAAKQ KKHGSKSKRK DDEHLKQSRK
401: NNDHQRSSSN HAGVSTVDEL EDFAMGKPQS VHALNAEEFE RSTAAAASAA AMKEAMDKAE AKFKHAKEVR ERERDAKIRN REQREQDSVT RSYAQDREDK
501: ERKERLEQER EMKQNEEKER EQRRLEEERE LERHKERERA RQAVERATKE ARERAAVEAR AKAEREARQR SERAAVQRAQ QEARERAAVE AKERAERATA
601: EAKERAAAEG KEKAASQARD RAAAERAAVE RAQQEARKRA ERAAVERAAA EARERQAAAA RDKTSKPDDL ESFFGMGARA NSAPKQRAPT VDSMFHSQTQ
701: NRGSSTSTSM KKASSTTNIA DDLSAIFGGA PTSEEFQEVD GESEERRRAR MERHQRTRER AAKALAEKNE RDMQQQREQA ERHRLAETLD FEIKRWAAGK
801: EGNLRALLST LQYVLWPECG WQPVSLTDLI TAAAVKKVYR KATLCIHPDK VQQKGANLQQ KYIAEKVFDL LKEAWNKLNS EELF
001: MDDFTGLLAR DFGLKPQGKS APMASQSNSS AADFNTFASS YSFATAAGKK SDSLPVFDDP GRDGDDLLFK DVFSGPPPPK YGSSSGDSRS PSAPAFDYDA
101: MFKEPKSKSA SSMPVYDKPV YDDEDVFESI PELKIPSTSS QSARFENVFS SISSSPTKHR KQNSSPFDDL MGNNLGKKGA DSDREEKGSS IFDDLIPGFG
201: RTSSPPSKRT TSETTNQSEK APYRTAETSS NVEEDPFVVL EESESTPREP SRTDPLDDIG KFNSRKTDHS SVHGGVFVDI DPLDNLGKPG PDMNSKGKSH
301: LRPPGNISGS QSPPVESPGS YHSKKVSFED FLEPHNMSTP PPTNSNGSFE SSDDVWLTVS EIPLFTQPTS APPPTRPPPP RPTRPIKKKV NEPSIPTSAY
401: HSHVPSSGRA SVNSPTASQM DELDDFSIGR NQTAANGYPD PSSGEDSDVF STAAASAAAM KDAMDKAEAK FRHAKERREK ENLKASRSRE GDHTENYDSR
501: ERELREKQVR LDRERAEREA EMEKAQEREK EEREREQKRI ERERERLVAR QAVERATREA RERAATEAHA KVQRAAVGKA TDARERAERA AVQRAHAEAR
601: ERAAAGARDK AAKAAAEARE KAEKAAAEAK ERANAEAREK ETRVRAERAA VERAAAEARG RAAAQAKAKQ QQENTNDLDS FFSSISRPNS APRQRTNPLD
701: PFQDSWNKGG SFESSRESLR VPPGQPENLR KTSSVTNIVD DLSSIFGASA SQSGGFQDVD GETEERRRAR LERHQRTQER AAKALAEKNE RDLQVQREQV
801: EKDRIGVTLD VEIKRWGAGK EGNLRALLST LQYVLWPECG WQPVSLTDLI TAASVKKVYR KATLCIHPDK VQQKGANLQQ KYIAEKVFDM LKEAWNKFNS
901: EELF
101: MFKEPKSKSA SSMPVYDKPV YDDEDVFESI PELKIPSTSS QSARFENVFS SISSSPTKHR KQNSSPFDDL MGNNLGKKGA DSDREEKGSS IFDDLIPGFG
201: RTSSPPSKRT TSETTNQSEK APYRTAETSS NVEEDPFVVL EESESTPREP SRTDPLDDIG KFNSRKTDHS SVHGGVFVDI DPLDNLGKPG PDMNSKGKSH
301: LRPPGNISGS QSPPVESPGS YHSKKVSFED FLEPHNMSTP PPTNSNGSFE SSDDVWLTVS EIPLFTQPTS APPPTRPPPP RPTRPIKKKV NEPSIPTSAY
401: HSHVPSSGRA SVNSPTASQM DELDDFSIGR NQTAANGYPD PSSGEDSDVF STAAASAAAM KDAMDKAEAK FRHAKERREK ENLKASRSRE GDHTENYDSR
501: ERELREKQVR LDRERAEREA EMEKAQEREK EEREREQKRI ERERERLVAR QAVERATREA RERAATEAHA KVQRAAVGKA TDARERAERA AVQRAHAEAR
601: ERAAAGARDK AAKAAAEARE KAEKAAAEAK ERANAEAREK ETRVRAERAA VERAAAEARG RAAAQAKAKQ QQENTNDLDS FFSSISRPNS APRQRTNPLD
701: PFQDSWNKGG SFESSRESLR VPPGQPENLR KTSSVTNIVD DLSSIFGASA SQSGGFQDVD GETEERRRAR LERHQRTQER AAKALAEKNE RDLQVQREQV
801: EKDRIGVTLD VEIKRWGAGK EGNLRALLST LQYVLWPECG WQPVSLTDLI TAASVKKVYR KATLCIHPDK VQQKGANLQQ KYIAEKVFDM LKEAWNKFNS
901: EELF
Arabidopsis Description
AUXI1Auxilin-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU08]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.