CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 4
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63993	Soybean	nucleus, plastid	89.8	90.79
PGSC0003DMT400052312	Potato	cytosol	10.09	89.42
KRH40961	Soybean	endoplasmic reticulum	73.64	72.7
KRG89681	Soybean	extracellular, golgi	6.62	72.62
KRH59609	Soybean	nucleus	74.62	69.99
VIT_00s0188g00210.t01	Wine grape	plastid	11.61	66.05
GSMUA_Achr2P02260_001	Banana	nucleus	17.68	58.84
VIT_07s0031g02350.t01	Wine grape	nucleus, plastid	59.54	57.31
CDY31429	Canola	plastid	48.48	54.78
Solyc09g018960.2.1	Tomato	nucleus	53.9	53.96
CDX76445	Canola	nucleus	48.48	53.6
Bra020913.1-P	Field mustard	nucleus	48.59	53.59
GSMUA_Achr11P...	Banana	nucleus	53.58	53.23
Solyc06g082840.2.1	Tomato	nucleus	55.31	52.96
PGSC0003DMT400071173	Potato	nucleus	54.77	52.94
EES17168	Sorghum	mitochondrion, nucleus	51.08	52.51
HORVU5Hr1G024350.1	Barley	plasma membrane	41.87	52.3
Zm00001d041647_P004	Maize	nucleus	50.0	52.15
Os12t0548200-02	Rice	plasma membrane	51.52	51.35
AT4G12770.1	Thale cress	nucleus	49.57	51.29
TraesCS5D01G104700.2	Wheat	nucleus	49.02	50.84
TraesCS5A01G092500.2	Wheat	nucleus	49.13	50.78
AT4G12780.1	Thale cress	nucleus	49.78	50.77
GSMUA_Achr3P24020_001	Banana	nucleus	43.82	50.63
Zm00001d023838_P014	Maize	mitochondrion, nucleus	49.35	50.39
GSMUA_Achr1P26650_001	Banana	nucleus	47.83	50.23
TraesCS5B01G098600.2	Wheat	nucleus	48.48	50.11
PGSC0003DMT400052311	Potato	nucleus	45.55	49.76
KRH53284	Soybean	nucleus	26.14	46.71
KRH64620	Soybean	nucleus	26.14	46.62
Os11t0661200-01	Rice	nucleus	44.47	46.17
EES08933	Sorghum	nucleus, plastid	44.58	45.21
Zm00001d007692_P003	Maize	plasma membrane	43.17	44.87
TraesCS4D01G145200.4	Wheat	nucleus	42.41	44.38
HORVU4Hr1G033280.4	Barley	nucleus	42.19	41.78
TraesCS4A01G169200.1	Wheat	nucleus	42.19	41.21
TraesCS4B01G126200.1	Wheat	nucleus	41.43	40.9
KRH12827	Soybean	nucleus	12.69	25.11
KRH37791	Soybean	nucleus	12.36	24.36
KRH58698	Soybean	nucleus	12.04	23.87
KRH44795	Soybean	nucleus	11.71	23.84
KRH42596	Soybean	nucleus	12.04	23.32
KRH69887	Soybean	nucleus	28.63	18.33
KRH76753	Soybean	nucleus	27.55	18.09
KRH28713	Soybean	nucleus	27.11	18.01
KRH61195	Soybean	nucleus	12.26	17.85
KRH70946	Soybean	nucleus	24.51	17.04
KRH75084	Soybean	nucleus	24.51	16.89
KRH51877	Soybean	nucleus	12.8	16.39
KRH08235	Soybean	nucleus	8.13	9.35

Protein Annotations

EMBL:ACUP02003491	EnsemblPlants:KRH53945	EnsemblPlantsGene:GLYMA_06G156500	EntrezGene:100777111	Gene3D:1.10.287.110	GO:GO:0005575
GO:GO:0006810	GO:GO:0006898	GO:GO:0008150	GO:GO:0031982	InterPro:IPR036869	InterPro:J_dom_sf
ncoils:Coil	PANTHER:PTHR23172	PANTHER:PTHR23172:SF54	ProteinID:KRH53945	ProteinID:KRH53945.1	SEG:seg
SUPFAM:SSF46565	UniParc:UPI000233A466	UniProt:I1KBN1	MapMan:22.1.6.4	:	:

Description

hypothetical protein

Coordinates

chr6:+:12844044..12851729

Molecular Weight (calculated)

101857.0 Da

IEP (calculated)

5.959

GRAVY (calculated)

-0.988

Length

922 amino acids

Sequence
(BLAST)

001: MNDFDGLLTT DFGFKPQGKS APMAASKSSS SSNNNKTSSL NFDLGSRSAR GASNSSVNAA ATSLDDLFGD SSSVFRASAD FRSKPVNDGP VFDKPVYDED
101: IFDGVPGLKS SSKVFYDDVF ASGGSAAAAF DDLLVGLGKS EKSEKVEKGA RDFDDLISGF GSSKAKASTD RTVPDINLSR EPTINASKTA SSAANDPFKV
201: FESTSAPIDS SSDYFTDPLE EISKFTSSRS TKNDSSSNSN EVYNDIDPFG GLGNSVPAFS AERNSMKGSN SPTPRSNTSS SWTGDKESND KSSVRSPERQ
301: KQNKIPVDHD QEFLQAAFDM PIYSSDSYKP VDQRSTSPSY DNNGFRQASI QEDMSPKYEE KLESNDDIWL MVSEIPLFTQ PTAAPPPSRP PPPRPVHIPK
401: SGAGSSASAN VRKKDNEFSY FPSSSQFSQG SESAPAAAKL SSASQFDELE DFAMGKSHDN DDERINGLAD EELEMNSAAA AMKEAMDRAE AKFRHAKGVR
501: ERENTKASKS KEPVQLEKDG RAVSEDRGKQ ERLDHERQQK EREEKEQRRR EKEREEKERE QQRLEREREK ARQAVERATR EARERAAVEA RRRAERAAVE
601: KANTEARKRA ERAAVQRAQA EARERAATEA KERAEKASAE AKEREVRERA AAARAEPEAR VKAERAAVER AAAEARERAA AQARERAAAA ARMSQQQNDN
701: DLESFFSTGA RANSAPRPPR SSSSDSVFDA QFQSDLTRKS TGVSSSMKKA SSSTNIVDDL SSIFGAAPSS SGEFQEIEGE TEERRRARLE RHQRTQERAA
801: KALAEKNQRD LQTQRDQAER HRVAETLDFE IKRWAAGKEG NLRALLSTLQ YVLWPECGWQ PVSLTDLITA AAVRKVYRKA TLCTHPDKVQ QKGATIQQKY
901: IAEKVFDLLK EAWNKFNSEE LF

Best Arabidopsis Sequence Match ( AT4G12770.1 )
(BLAST)

001: MDDFTGLLAR DFGLKPQGKS APMASQSNSS AADFNTFASS YSFASAAGKK SDSLPVFDDL GRDGDDLLFR DVFSGPPPKY GSSGDSRSPS APAFDYDVMF
101: KEPKSKSASS MPVYDKPVYD DEDVFESIPE LKIPSTSSQS ARFENVFSSI SSSPTKHRKQ NSSPFDDLMG NNLGKKESDR EEKGSSIFDD LIPGFGRTSS
201: PPAKRTTSET TSQSQKPPYR TAETSSNVKE DPFVVLEEST STLREPSTGG FTDPLEEIGK FNSRKTDHSS VHGGVFVDTD PLDSLGKSGP DMNSRGKSHL
301: RPPGNISGSQ SPVESSGLYH SKNVSFDDVV EPQNTSTPPP TNSDGSFESS DDVWLTVSEI PLFTQPTSAP PPTRPPPPRP TRPIKKKVNE PSIPTSAYHS
401: HVPSSGRASV NSPTASQMDE LDDFSIGRNQ TAANGYPDPS SGEDSDVFST AAASAAAMKD AMDKAEAKFR HAKERREKES LKASRSREGD HTENYDSRER
501: ELREKQVRLD RERAEREAEM EKTQAREREE REREQKRIER ERERLLARQA VERATREARE RAATEAHAKV QRAAVGKVTD ARERAERAAV QRAHAEARER
601: AAAGAREKAE KAAAEARERA NAEVREKEAK VRAERAAVER AAAEARGRAA AQAKAKQQQE NNNDLDSFFN SVSRPSSVPR QRTNPPDPFQ DSWNKGGSFE
701: SSRPSSRVPS GPTENLRKAS SATNIVDDLS SIFGAPASQS GGFQDVDGET EERRRARLER HQRTQERAAK ALAEKNERDL QVQREQAEKD RIGGTLDVEI
801: RRWGAGKEGN LRALLSTLQY VLWPECGWQP VSLTDLITGA SVKKVYRKAT LCIHPDKVQQ KGANLQQKYI AEKVFDMLKE AWNKFNSEEL F

Arabidopsis Description

Auxilin-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WQ57]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.