Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400052312 | Potato | cytosol | 10.48 | 88.46 |
| VIT_00s0188g00150.t01 | Wine grape | cytosol | 4.56 | 86.96 |
| VIT_10s0116g01370.t01 | Wine grape | extracellular | 7.29 | 76.19 |
| VIT_00s0188g00210.t01 | Wine grape | plastid | 11.85 | 64.2 |
| GSMUA_Achr11P... | Banana | nucleus | 59.45 | 56.25 |
| GSMUA_Achr2P02260_001 | Banana | nucleus | 17.08 | 54.15 |
| GSMUA_Achr3P24020_001 | Banana | nucleus | 47.27 | 52.01 |
| GSMUA_Achr3P15350_001 | Banana | nucleus | 20.39 | 50.85 |
| KRH53945 | Soybean | nucleus, plastid | 50.23 | 47.83 |
| CDY31429 | Canola | plastid | 44.08 | 47.43 |
| KRH63993 | Soybean | nucleus, plastid | 49.2 | 47.37 |
| VIT_07s0031g02350.t01 | Wine grape | nucleus, plastid | 51.48 | 47.18 |
| Bra020913.1-P | Field mustard | nucleus | 44.87 | 47.13 |
| CDX76445 | Canola | nucleus | 44.42 | 46.76 |
| KRH40961 | Soybean | endoplasmic reticulum | 49.66 | 46.68 |
| AT4G12770.1 | Thale cress | nucleus | 47.15 | 46.46 |
| AT4G12780.1 | Thale cress | nucleus | 47.15 | 45.8 |
| Solyc09g018960.2.1 | Tomato | nucleus | 47.84 | 45.6 |
| KRH59609 | Soybean | nucleus | 49.89 | 44.56 |
| Solyc06g082840.2.1 | Tomato | nucleus | 47.95 | 43.72 |
| PGSC0003DMT400071173 | Potato | nucleus | 47.15 | 43.4 |
| PGSC0003DMT400052311 | Potato | nucleus | 38.72 | 40.28 |
| GSMUA_Achr7P25560_001 | Banana | nucleus | 29.39 | 19.59 |
| GSMUA_Achr1P13920_001 | Banana | nucleus | 26.99 | 16.62 |
| GSMUA_Achr7P25970_001 | Banana | nucleus | 12.3 | 15.63 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P26650_001 | EnsemblPlants:GSMUA_Achr1T26650_001 | EnsemblPlantsGene:GSMUA_Achr1G26650_001 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:IPR001623 |
| InterPro:IPR036869 | InterPro:J_dom_sf | ncoils:Coil | PANTHER:PTHR23172 | PANTHER:PTHR23172:SF54 | PFscan:PS50076 |
| SEG:seg | SUPFAM:SSF46565 | UniParc:UPI00029649E6 | UniProt:M0S3C2 | MapMan:22.1.6.4 | : |
Description
Putative Auxilin-related protein 2 [Source:GMGC_GENE;Acc:GSMUA_Achr1G26650_001]
Coordinates
chr1:-:22211150..22226076
Molecular Weight (calculated)
96318.3 Da
IEP (calculated)
6.311
GRAVY (calculated)
-0.816
Length
878 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEFSGILDR DFGLRPQGKS TPIASPSTAA TNPSSGWNSA SIGDPFLRDR GAGISKDYDY VFVGVPANSS WSSRGQYASS SSPSNFDSIF NGFADSGTKS
101: SSSLPVYDKP VYDDDIFDGV PGTKSSSSVK YDDAFASLSS GSNHVSAPPY EDLLENLGKQ MPESRAGSDK RSGEKEEQDM SGFDELIPGF GRSSPPKKRE
201: DQEVSQQMSD ISLDKPATSK SEDSFVILES VSNSKYSSSG LFSNPLKNIS EPMNFGSMRV DTSPVSETIF DDVNAFDGIS KSVPLSQQVQ STKSSDLQNT
301: VGRNGIQNMD TYGKNTTVDQ SPEFNQPIET RDDIWLTVSE IPLQTQPTSA PPPSRPPPPL VIKKAPLGAY TKRKENESFH DSTQSHPYTE KSAKPASVDE
401: LEDFAMGKPK TYTQVTQHHE DFFFNGEELQ KKLAAEAAMK EAMHRAEARF KHAKEARGID RGAKVSRNEE YIDEKKNLDE KEREQEVDRE REKARQAAAR
501: AIREARDRAG AEARLKAERA AAETRQRAER AAVQRAAAEA RERAAAVAIE RAEKAAVEAR EKAAAEAKER ERAAAELREK AAAEAREKTA AEAREKAAAE
601: ARTAVERAAA EARLRAQRAA VERAAAEARE RAAAAARERA ATSAAAAVRE HQKVENDLES FFSMGGARAS SAHTSSETMF DVKDQNKGSS DGTRRTSSGS
701: SSTIRKASST TNIVGDLTSI FGGPPSSGKF QEVEGESEKR RAARLERHQR TQELAAKALA EKNERDMQIQ REQAERHRIA EALDIEIKRW AAGKEGNLRA
801: LLSTLQYVLW PECGWQPVSL TDLITAAAVK KVYRRATLCV HPDKVQQKGA TLQQKYIAEK VFDLLKEAWN KLNSEELF
101: SSSLPVYDKP VYDDDIFDGV PGTKSSSSVK YDDAFASLSS GSNHVSAPPY EDLLENLGKQ MPESRAGSDK RSGEKEEQDM SGFDELIPGF GRSSPPKKRE
201: DQEVSQQMSD ISLDKPATSK SEDSFVILES VSNSKYSSSG LFSNPLKNIS EPMNFGSMRV DTSPVSETIF DDVNAFDGIS KSVPLSQQVQ STKSSDLQNT
301: VGRNGIQNMD TYGKNTTVDQ SPEFNQPIET RDDIWLTVSE IPLQTQPTSA PPPSRPPPPL VIKKAPLGAY TKRKENESFH DSTQSHPYTE KSAKPASVDE
401: LEDFAMGKPK TYTQVTQHHE DFFFNGEELQ KKLAAEAAMK EAMHRAEARF KHAKEARGID RGAKVSRNEE YIDEKKNLDE KEREQEVDRE REKARQAAAR
501: AIREARDRAG AEARLKAERA AAETRQRAER AAVQRAAAEA RERAAAVAIE RAEKAAVEAR EKAAAEAKER ERAAAELREK AAAEAREKTA AEAREKAAAE
601: ARTAVERAAA EARLRAQRAA VERAAAEARE RAAAAARERA ATSAAAAVRE HQKVENDLES FFSMGGARAS SAHTSSETMF DVKDQNKGSS DGTRRTSSGS
701: SSTIRKASST TNIVGDLTSI FGGPPSSGKF QEVEGESEKR RAARLERHQR TQELAAKALA EKNERDMQIQ REQAERHRIA EALDIEIKRW AAGKEGNLRA
801: LLSTLQYVLW PECGWQPVSL TDLITAAAVK KVYRRATLCV HPDKVQQKGA TLQQKYIAEK VFDLLKEAWN KLNSEELF
001: MDDFTGLLAR DFGLKPQGKS APMASQSNSS AADFNTFASS YSFASAAGKK SDSLPVFDDL GRDGDDLLFR DVFSGPPPKY GSSGDSRSPS APAFDYDVMF
101: KEPKSKSASS MPVYDKPVYD DEDVFESIPE LKIPSTSSQS ARFENVFSSI SSSPTKHRKQ NSSPFDDLMG NNLGKKESDR EEKGSSIFDD LIPGFGRTSS
201: PPAKRTTSET TSQSQKPPYR TAETSSNVKE DPFVVLEEST STLREPSTGG FTDPLEEIGK FNSRKTDHSS VHGGVFVDTD PLDSLGKSGP DMNSRGKSHL
301: RPPGNISGSQ SPVESSGLYH SKNVSFDDVV EPQNTSTPPP TNSDGSFESS DDVWLTVSEI PLFTQPTSAP PPTRPPPPRP TRPIKKKVNE PSIPTSAYHS
401: HVPSSGRASV NSPTASQMDE LDDFSIGRNQ TAANGYPDPS SGEDSDVFST AAASAAAMKD AMDKAEAKFR HAKERREKES LKASRSREGD HTENYDSRER
501: ELREKQVRLD RERAEREAEM EKTQAREREE REREQKRIER ERERLLARQA VERATREARE RAATEAHAKV QRAAVGKVTD ARERAERAAV QRAHAEARER
601: AAAGAREKAE KAAAEARERA NAEVREKEAK VRAERAAVER AAAEARGRAA AQAKAKQQQE NNNDLDSFFN SVSRPSSVPR QRTNPPDPFQ DSWNKGGSFE
701: SSRPSSRVPS GPTENLRKAS SATNIVDDLS SIFGAPASQS GGFQDVDGET EERRRARLER HQRTQERAAK ALAEKNERDL QVQREQAEKD RIGGTLDVEI
801: RRWGAGKEGN LRALLSTLQY VLWPECGWQP VSLTDLITGA SVKKVYRKAT LCIHPDKVQQ KGANLQQKYI AEKVFDMLKE AWNKFNSEEL F
101: KEPKSKSASS MPVYDKPVYD DEDVFESIPE LKIPSTSSQS ARFENVFSSI SSSPTKHRKQ NSSPFDDLMG NNLGKKESDR EEKGSSIFDD LIPGFGRTSS
201: PPAKRTTSET TSQSQKPPYR TAETSSNVKE DPFVVLEEST STLREPSTGG FTDPLEEIGK FNSRKTDHSS VHGGVFVDTD PLDSLGKSGP DMNSRGKSHL
301: RPPGNISGSQ SPVESSGLYH SKNVSFDDVV EPQNTSTPPP TNSDGSFESS DDVWLTVSEI PLFTQPTSAP PPTRPPPPRP TRPIKKKVNE PSIPTSAYHS
401: HVPSSGRASV NSPTASQMDE LDDFSIGRNQ TAANGYPDPS SGEDSDVFST AAASAAAMKD AMDKAEAKFR HAKERREKES LKASRSREGD HTENYDSRER
501: ELREKQVRLD RERAEREAEM EKTQAREREE REREQKRIER ERERLLARQA VERATREARE RAATEAHAKV QRAAVGKVTD ARERAERAAV QRAHAEARER
601: AAAGAREKAE KAAAEARERA NAEVREKEAK VRAERAAVER AAAEARGRAA AQAKAKQQQE NNNDLDSFFN SVSRPSSVPR QRTNPPDPFQ DSWNKGGSFE
701: SSRPSSRVPS GPTENLRKAS SATNIVDDLS SIFGAPASQS GGFQDVDGET EERRRARLER HQRTQERAAK ALAEKNERDL QVQREQAEKD RIGGTLDVEI
801: RRWGAGKEGN LRALLSTLQY VLWPECGWQP VSLTDLITGA SVKKVYRKAT LCIHPDKVQQ KGANLQQKYI AEKVFDMLKE AWNKFNSEEL F
Arabidopsis Description
Auxilin-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WQ57]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.