Factsheet for GSMUA_Achr3P15350_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P02260_001	Banana	nucleus	25.28	32.13
GSMUA_Achr1P26650_001	Banana	nucleus	50.85	20.39
GSMUA_Achr1P13920_001	Banana	nucleus	81.25	20.06
GSMUA_Achr11P...	Banana	nucleus	52.56	19.94
GSMUA_Achr7P25560_001	Banana	nucleus	72.44	19.36
GSMUA_Achr3P24020_001	Banana	nucleus	40.91	18.05
VIT_04s0023g02070.t01	Wine grape	nucleus	67.61	16.36
CDX75581	Canola	nucleus	54.55	15.99
CDX69230	Canola	nucleus	54.26	15.67
Bra011688.1-P	Field mustard	nucleus	54.55	15.34
EES18741	Sorghum	nucleus	62.5	15.11
KRH75084	Soybean	nucleus	57.39	15.1
KRH70946	Soybean	nucleus	56.82	15.08
VIT_18s0001g12770.t01	Wine grape	nucleus	57.39	14.95
KRH69887	Soybean	nucleus	60.8	14.86
TraesCS1A01G419500.1	Wheat	nucleus	57.95	14.81
Solyc02g085030.2.1	Tomato	nucleus	58.52	14.66
Zm00001d039120_P002	Maize	nucleus	62.22	14.41
PGSC0003DMT400009048	Potato	nucleus	58.52	14.28
KRH28713	Soybean	nucleus	56.25	14.27
KRH76753	Soybean	nucleus	56.82	14.24
TraesCS3B01G258000.2	Wheat	nucleus	59.66	14.12
EES03325	Sorghum	nucleus	60.23	14.06
TraesCS3D01G224500.1	Wheat	nucleus	60.51	14.0
TraesCS3A01G226500.1	Wheat	nucleus	59.94	13.89
HORVU1Hr1G091570.1	Barley	nucleus	58.24	13.63
AT4G36520.1	Thale cress	nucleus, plastid	54.55	13.5
TraesCS1D01G427300.1	Wheat	nucleus	58.24	13.27
HORVU3Hr1G056550.8	Barley	cytosol	59.94	13.26
TraesCS1B01G449600.1	Wheat	nucleus	57.95	13.19
Solyc04g080600.2.1	Tomato	nucleus	55.4	12.91
CDX73162	Canola	nucleus	48.58	12.34
PGSC0003DMT400009477	Potato	nucleus	55.68	12.33
CDY45424	Canola	nucleus	48.86	11.98
AT1G75310.2	Thale cress	nucleus	48.86	11.85
Zm00001d044121_P002	Maize	nucleus	53.12	11.82
GSMUA_Achr7P25970_001	Banana	nucleus	22.73	11.58
Bra015852.1-P	Field mustard	nucleus	48.58	11.52
Os01t0634300-00	Rice	nucleus	29.26	7.7
Os05t0579900-01	Rice	nucleus	1.14	0.36
KRH08235	Soybean	nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr3P15350_001	EnsemblPlants:GSMUA_Achr3T15350_001	EnsemblPlantsGene:GSMUA_Achr3G15350_001	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	ncoils:Coil	PANTHER:PTHR23172	PANTHER:PTHR23172:SF42	PFscan:PS50076
SEG:seg	SUPFAM:SSF46565	UniParc:UPI000294CAF1	UniProt:M0SEV1	MapMan:22.1.6.4	:

Description

dnaJ domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G15350_001]

Coordinates

chr3:+:16174828..16177716

Molecular Weight (calculated)

40833.6 Da

IEP (calculated)

9.109

GRAVY (calculated)

-1.219

Length

352 amino acids

Sequence
(BLAST)

001: MRLLEEAKEK ERKLEEERTK ILEEAKDRER KLEEEKERAR LLEEEKERER EREKDRLAVE RATREAHDRA FTDARERAER IAAERVTSEA WQRAHTREKA
101: EKATSEALEK SLTEKAAREA RLRAERAAVE RATAEARERA VERALAEKAA ADARERAERC NATSRDRTRK ENVTEEHLRA RDKDATQDSH FRSTGSSYQA
201: NSDSDDQGAG ESALRCKARL ERHNRIAERA AKALAEKNMR DILAQREQAE RNRLAEYLDA DIKRWSSGKE GNLRALLSTL QYILSPESGW QPIPLTDVIT
301: ASAVKKAYRK ATLCVHPDKL QQRGANIQQK YVCEKVFDLL KEAWNRFNSE ER

Best Arabidopsis Sequence Match ( AT4G36520.1 )
(BLAST)

0001: MENLSHSRNP NRSSSLPKKP YNGNNTTGGF SYNSGKTANT TTTTTYDDVF GGPPRFGAPT LSPRLEDYCE IFSGFNGSSR AAVSSIPVLD LPLVDDRDVY
0101: FDVRSQGFDY REVFGGFNDL DLAPSYEELF LQQKSTTVVG DGDSSDDAWT PEEVESCSGG TEHSGKSPCF SNGRDSYDSI DGSTEFNISY NKASQISGGE
0201: TNMSSSGVIR VADLGAIPGY TVAVDGTTKL NKVTGPSSVG RGTSRFVFED KYYSSEPFVT VSEIGLKTHP TGIPPPSRAA PILKSDFRSS ASNSKTTGSQ
0301: GSVDSSSSPT FFDVEVDANS AAVREAMLKA EAKLKSAKEL LERKRDVART TSTPSSTKNR IKEEGKSSYA AGLPVVKSNI DVARKSLKDK RGSKSLSSQG
0401: SATSDGNDEW KEANNQYVEL VRTELPRNAD ENSGGKDVSI PLNAEFFDQE LTWAGNVDWE KQRRRAKGDR EDHEARKLPK HSGTRKLSSR HKRHENKLAE
0501: KAPEEPKIEK SRHVEMGNDL PDHGGIVKHR NLLKPEENKL FTEKPAKQKK ELLCEEKTKR IQNQQLDKKT HQKAAETNQE CVYDWEQNAR KLREALGNES
0601: TLEVSVELNG NGKKMEMRSQ SETKLNEPLK RMEEETRIKE ARLREENDRR ERVAVEKAEN EKRLKAALEQ EEKERKIKEA REKAENERRA VEAREKAEQE
0701: RKMKEQQELE LQLKEAFEKE EENRRMREAF ALEQEKERRI KEAREKEENE RRIKEAREKA ELEQRLKATL EQEEKERQIK ERQEREENER RAKEVLEQAE
0801: NERKLKEALE QKENERRLKE TREKEENKKK LREAIELEEK EKRLIEAFER AEIERRLKED LEQEEMRMRL QEAKERERLH RENQEHQENE RKQHEYSGEE
0901: SDEKERDACE MEKTCETTKE AHGEQSSNES LSDTLEENES IDNDVSVNKQ KKEEEGTRQR ESMSAETCPW KVFEKTLKDA SQKEGTNEMD ADTRLFERNE
1001: ETPRLGENGG CNQQNGESGE ESTSVTENII GGKLEQKSKN SETSKDASVL KRVSGLKTEV EERLEDVVGV GRDQRNPEES KSAPKTSYGF RNHEYKFTHQ
1101: QERGNIYETQ AGLNQDAKVE RPLPSRVSVQ REKEAERLKR ERDLEMEQLR KVEEERERER EREKDRMAFD QRALADARER LEKACAEARE KSLPDKLSME
1201: ARLRAERAAV ERATSEARDR AAEKAAFEAR ERMERSVSDK QSQSSGFFGE RMEISLSDKQ FQNSVSFGAS RYQDSHGTEG ESPQRYTSRL ERHQRTADRV
1301: AKALAEKNMR DLVAQREQAE RIRIAETLDT EVKRWSSGKE GNIRALLSTL QYILGPESGW QPLPLTEVIT SAAVKRAYRK ATLCVHPDKL QQRGANIHQK
1401: YICEKVFDLL KEAWNRFNSE GR

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JPR4]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.