Skip to main content
crop-pal logo
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • plastid 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX73162 Canola nucleus 89.83 93.07
Bra015852.1-P Field mustard nucleus 94.57 91.45
AT1G75310.2 Thale cress nucleus 72.91 72.16
GSMUA_Achr3P15350_001 Banana nucleus 11.98 48.86
CDX88363 Canola cytosol 5.92 35.56
CDX87523 Canola cytosol 6.2 29.09
KRH70946 Soybean nucleus 23.54 25.49
VIT_18s0001g12770.t01 Wine grape nucleus 23.61 25.09
KRH75084 Soybean nucleus 23.33 25.04
CDY31429 Canola plastid 14.21 25.0
CDX76445 Canola nucleus 14.28 24.58
CDY04660 Canola cytosol 8.01 24.01
CDY01318 Canola cytosol 8.22 22.96
CDY00396 Canola nucleus 8.36 22.9
CDY08188 Canola nucleus 7.73 22.79
CDX75581 Canola nucleus 18.87 22.56
CDX69230 Canola nucleus 19.08 22.48
GSMUA_Achr7P25560_001 Banana nucleus 20.54 22.4
CDY26275 Canola cytosol 6.27 20.79
Solyc04g080600.2.1 Tomato nucleus 21.66 20.58
CDX90242 Canola nucleus 5.99 20.57
CDY70725 Canola nucleus 6.06 20.23
CDX77599 Canola nucleus 6.13 20.23
HORVU1Hr1G091570.1 Barley nucleus 20.82 19.88
PGSC0003DMT400009477 Potato nucleus 22.01 19.87
CDX98192 Canola nucleus 5.92 19.72
CDY54130 Canola cytosol 3.83 19.71
GSMUA_Achr1P13920_001 Banana nucleus 19.57 19.71
EES18741 Sorghum nucleus 19.92 19.64
TraesCS3D01G224500.1 Wheat nucleus 20.47 19.33
TraesCS3B01G258000.2 Wheat nucleus 19.92 19.23
Zm00001d039120_P002 Maize nucleus 20.33 19.21
TraesCS1A01G419500.1 Wheat nucleus 18.38 19.17
TraesCS1D01G427300.1 Wheat nucleus 20.61 19.16
TraesCS3A01G226500.1 Wheat nucleus 20.13 19.03
TraesCS1B01G449600.1 Wheat nucleus 20.33 18.88
HORVU3Hr1G056550.8 Barley cytosol 20.61 18.6
EES03325 Sorghum nucleus 18.87 17.97
CDY21468 Canola cytosol 4.04 16.96
Zm00001d044121_P002 Maize nucleus 17.34 15.74
CDX73142 Canola nucleus 6.48 15.71
CDY45410 Canola nucleus 6.48 15.66
Os01t0634300-00 Rice nucleus 14.0 15.03
Os05t0579900-01 Rice nucleus 9.26 12.04
CDY59467 Canola mitochondrion 6.48 9.4
Protein Annotations
EnsemblPlants:CDY45424EnsemblPlantsGene:GSBRNA2T00081937001Gene3D:1.10.287.110InterPro:DnaJ_domainInterPro:IPR001623InterPro:IPR036869
InterPro:J_dom_sfncoils:CoilPANTHER:PTHR23172PANTHER:PTHR23172:SF42PFscan:PS50076ProteinID:CDY45424
ProteinID:CDY45424.1SEG:segSUPFAM:SSF46565UniParc:UPI0004EE9219UniProt:A0A078I7P7MapMan:22.1.6.4
Description
BnaA07g32040DBnaA07g32040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I7P7]
Coordinates
chrLK032624:+:202845..208315
Molecular Weight (calculated)
160689.0 Da
IEP (calculated)
4.692
GRAVY (calculated)
-1.024
Length
1436 amino acids
Sequence
(BLAST)
0001: MEYEKPPSAT TFSRKMTSRS HSHSLSFSAN AVYDGVFSSP ANAKSPLVDY GEIFRGSGPS PSSIPFLDVP ELNVGKVKVD VRSSKLDYGS VFGGFGGCGD
0101: FAVTPNEVIV RPEKKERSLW FVVLMCRSRR KGGSSSDEVK NLTSSPEMVR MKHSDILLHQ TKENGTAHLT QVQAMSGPGP TQVVVVHNTS LLQKVESKTP
0201: IPSVEEVQAS RKRRSKTEVD YEKIFVRDES STRDNSTCKT DSIAERRDVK PPSSLLQRTL NGESGASERL MGFSSGLPER FHQAEVDDDS PSSPPFFDAE
0301: TDIDSSAAAS SAALKKALEE AQVRMNIAKQ MMERKKSGFR SSAKLKTCDE SPKVEVKNEA VVSSQVEDKR DEQVEEKLQE NSPQVLGEVV KSSEQSFSNE
0401: GDQHAKRARK QWDVPEGLLN STSDHKREEV KEQEDVKLEE EQARKARKHW DLPGGIFKSV MKSKQQEPES LAPAKTESDA KQEVQPLTEN PFYTFGQLGS
0501: KIKGVVEAFT GSKVSQKNES HATEEEKSIL PQMVHCEEGG DSHEMLAGIP VTEAEEIQQQ TESRGETKQE VKSESKMSIL AEECSEKMEK ETGWQVKTSC
0601: DSEDGPECGV IVFQENPDPT YSFLDQESEK EIVSRPQEML VSPDDTKSDV REVEEIPTPN ESLSTTQLDE SVGTMVSFAK ESTPEPGNIH EETEHKAPRR
0701: RRVWKTSEDV YNMIRAPKGN KRHWQLPSVE TETTQRSFQM EGVRIHDSSE EIESTSEQAS DSGLQENWTV LKQMFRQMFQ TTDTTKGEDE TYCLVESEKE
0801: HIDIHQEAGD ENGKETSYCQ ITGTDRDEQN EVETENKAYG HTIENEELES EQETNCREEE GNVEVHGKTS LVRELIGEEE PDATGMASDQ EGEYVPEVFE
0901: EAGWAHGLSE LDEIREHPDS HAEMLEYDRS ETDSNKSCEK FDQTRELAEE TKIDCSVDTD TSRSSFETRQ GDSHTEEVGF EQDLRDQFHE KNSAASSTEE
1001: HVEEIDTDSI QSGWSVDDKI KSYVEESLAA HMQDGGASKV EEIEEPKEES DDMETSLSEE NNEDKTEQEH RFECQKEEVD RNNVESAESS CCLPKGDEEI
1101: GAAANINMKE NEGEESCRSS TSDASQKEAD RVEKHLKKKD EAKEKERAKE KERSMVERAI REARERAFAD AKERAGKAAM EKAKARVPRR VASDGPRRSE
1201: KASVEGNDKL SSAEKASMQA KLRAERAAVE RALSEARERA LEKALSGKFD ASQTRSYGGS KSFGSSGDRR GSSSSVTENK SSGPSSSSNQ TAKGEPIQRC
1301: KARSERHQRT SERAAEALAE KKLRDLKVQK EEAERNRLSE ALDADVKRWS NGKENNLRAL LSTLQYILGA ESGWKPIPLT DLVSSASVRK AYRKATLYVH
1401: PDKLQQRGAS TQQKYICEKV FDLLKEAWNK FGADER
Best Arabidopsis Sequence Match ( AT1G75310.2 )
(BLAST)
0001: MEYEKSPTAT TFSRKISNNR SHSLSFSANA VYDGVFSSPV NSKSPLVDYG EIFRGSGPSP SSIPFLDVPE LNVGKVKVDV RSSKLDYSSV FGGLGACDFA
0101: VTPKEVIIKS EKKTSINEDK KRNRRKGGNS SDVPLCNEGK KSPEMVRMKH SDISYHQTVP RNENGATHLT QVPATMPGPI PTQVVDNTSL LHKIESKSTP
0201: IPAVEKKLPC NEGREEVKAS RKQGSKTEVD FENIFARDGC STRDDSTCKT VSNGEYRDVK PPSSFQCTLN GEHGASERLS GLNSGPSERY ETEDADSPSS
0301: PPYFDAETDE NSVAAESSAA LKKAIEEAQI RMNIAKQMME KKKSGFRSCA KLKSCDDSKI ENKGNTKVEG ITEESRDNNS QILGEMVKPS EQSFSNEGDQ
0401: HAKRARKLWG VPEGLLKSTS DHKPEELEEQ DIITLEEEQA RRGRKHWELP GGIFKSVMNS KQQEPENLAP AKPEPDTKQE VQPITENPFY TFGQLGSKLK
0501: CVVEAFTGSK VSQKDEKQFT EKENSTVTQM VQDEESDSQE MLAGIPVIET YLREVEETPQ QTESKSEMNI EEKSESTICA FTERSSQNME KETGWQVKSA
0601: CKFEDGSGVK DFQENGDHTC NVLDQEGEKE IVSEPQEMLV GPDDSKTYVR EVEETPTPSL NKTQSDDSVG AMVSFNRVNI SEPGNIDEVQ EAVHKVPRRR
0701: RVWKTSEDVY NMIKAPKGNN RPWQLESAEN ETTAMSFHEE GVRIHHASEE IESTSGQASD SGLQENWTVL KQMFRQMFQT ADTKGEDETY CLVESERGHL
0801: DIHQKAQEKY EQVEVETVRT NYEAYAHTRE NEDESAQETY CRKEDGKVEV QGKTSLVREL IGEELEMASL EEEDVQEASE EAGWVQGLSE LNEINEHADS
0901: HAEMLEYDRS ETDSNNSRER FDQTQEQAEE TMIDGSIDTD TSRSSFEMRQ GDSYIEEVGI EQHRSDQFPE KASAVSNTEE HIEEIDSDSI QSGWSVVEDD
1001: DRSLQDGGAS QAESKHDELE ETKEESDEMK TSLGVERNGD KKELEHQFEC QENETYRSNV EAAESSCRFP NGEEIIGAAT NGNMKENEGE EGEESCRSSM
1101: EEEGDATSDI GAATDGNMKE NEGEESCRSS MEEEGDATSD ISQNKAETVE EHLKKIDETR EKERERKQER VMVERAIREA RERAFADAME RAGKTAMEKA
1201: KAVAHRREVP RKSEKGSVEV NDKLSSAEKA SMQAKLRAER AAVERAITEV RERAMEKALS GKSAASQAKS YGGSKSFSSS GERRGSSSSQ GTENKSSGPS
1301: NSSNQTAKGE PIQRCKARSE RHQRTSDRAA EALAEKKLRD LKTQKEQTER NRLAEALDAD VKRWSSGKEN NLRALISTLQ YILGAESGWK PIPLTDLVSS
1401: ASVRKAYRKA TLYVHPDKLQ QRGASTQQKY ICEKVFDLLK EAWNKFGADE R
Arabidopsis Description
AUL1auxin-like 1 protein [Source:TAIR;Acc:AT1G75310]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.