Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS3D01G224500.1 | Wheat | nucleus | 96.03 | 93.89 |
TraesCS3A01G226500.1 | Wheat | nucleus | 95.76 | 93.75 |
HORVU3Hr1G056550.8 | Barley | cytosol | 90.11 | 84.22 |
GSMUA_Achr3P15350_001 | Banana | nucleus | 14.12 | 59.66 |
Os01t0634300-00 | Rice | nucleus | 47.75 | 53.1 |
EES03325 | Sorghum | nucleus | 53.8 | 53.05 |
Zm00001d044121_P002 | Maize | nucleus | 50.1 | 47.09 |
TraesCS1B01G449600.1 | Wheat | nucleus | 40.08 | 38.53 |
Os05t0579900-01 | Rice | nucleus | 26.23 | 35.29 |
GSMUA_Achr7P25560_001 | Banana | nucleus | 23.74 | 26.8 |
CDX69230 | Canola | nucleus | 21.79 | 26.58 |
CDX75581 | Canola | nucleus | 21.39 | 26.48 |
Bra011688.1-P | Field mustard | nucleus | 21.72 | 25.8 |
GSMUA_Achr1P13920_001 | Banana | nucleus | 24.28 | 25.32 |
TraesCS5B01G098600.2 | Wheat | nucleus | 15.13 | 25.22 |
Solyc02g085030.2.1 | Tomato | nucleus | 23.27 | 24.63 |
VIT_18s0001g12770.t01 | Wine grape | nucleus | 22.26 | 24.5 |
PGSC0003DMT400009048 | Potato | nucleus | 23.54 | 24.25 |
AT4G36520.1 | Thale cress | nucleus, plastid | 22.8 | 23.84 |
VIT_04s0023g02070.t01 | Wine grape | nucleus | 22.86 | 23.37 |
KRH28713 | Soybean | nucleus | 21.45 | 22.98 |
KRH69887 | Soybean | nucleus | 21.99 | 22.71 |
Solyc04g080600.2.1 | Tomato | nucleus | 22.73 | 22.37 |
KRH76753 | Soybean | nucleus | 20.44 | 21.65 |
KRH75084 | Soybean | nucleus | 19.44 | 21.6 |
KRH70946 | Soybean | nucleus | 19.03 | 21.34 |
PGSC0003DMT400009477 | Potato | nucleus | 22.53 | 21.07 |
TraesCS4B01G126200.1 | Wheat | nucleus | 13.11 | 20.88 |
CDX73162 | Canola | nucleus | 19.03 | 20.42 |
CDY45424 | Canola | nucleus | 19.23 | 19.92 |
AT1G75310.2 | Thale cress | nucleus | 19.3 | 19.78 |
Bra015852.1-P | Field mustard | nucleus | 19.44 | 19.46 |
TraesCS4B01G261900.1 | Wheat | nucleus, plastid | 7.33 | 17.08 |
KRH08235 | Soybean | nucleus | 7.46 | 13.84 |
Protein Annotations
EnsemblPlants:TraesCS3B01G258000.2 | EnsemblPlantsGene:TraesCS3B01G258000 | Gene3D:1.10.287.110 | InterPro:IPR036869 | InterPro:J_dom_sf | ncoils:Coil |
PANTHER:PTHR23172 | PANTHER:PTHR23172:SF52 | SEG:seg | SUPFAM:SSF46565 | MapMan:22.1.6.4 | : |
Description
No Description!
Coordinates
chr3B:-:415925189..415936937
Molecular Weight (calculated)
165520.0 Da
IEP (calculated)
4.810
GRAVY (calculated)
-0.947
Length
1487 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEDLTTAPPP RHRARRHRRK ASDSATYGDV FGGGPRFAPP VAGAPADYAD VFGGVAASCS IPYLDLPPAA AGSDGGAGRY GEIFTRAGFG EYAAPYEDMF
0101: AEPEGMPEEI ESWSGSSRSS IRKESAEMDA EPSLLYQHYP NVVYDQQFDE EQFSPISFPP DGEQQFNMSY NKATRGRLDD LVEMTTCMVE PSISYVVDSC
0201: NLSNDSATNH VPVMHNGALA NGEDKEMSPP PLPASGDSVA DEKQHISPCL PIYENHYEDK KDHRRSSIHS ASSEENNGAT ANDENKETSP PQLPVNGDPV
0301: TDEKQQHIST CLLNSENLHE DEKDHKRSSS THSASSEEVP SPDYPFLRMS NTHIQTPPIN VQPPSILPSN FLNKKESKSN RDSEVNPNSA AADAIKEATN
0401: VKQNISTCLL NSENLYEDEK DHKRSSTHSA SSEEVPSPDY PFLRVSNTHI QTPPIKEAMD FAEARLKAAK ELMERKGDSF KLRKRPGHHR GTKSTEIKED
0501: KGPEEVNIFE EKLTSRKLAE EENYENLSFL DKHRGSSAVK IADCYQDGKG VLSPGKPQQI IQSDSKLDQL GKWASDAEFY DLVSHHRKST TSTAACEGDN
0601: GPTTNPFTKH GHSEKVKEGV NAGDLERDGK LSGCNEITEL GNIHVDLIAD DTAALGVEHE APTAPEGSLW EERVVYQETN DSHIKEHVGQ SNSPKGHDDD
0701: GIFEASCMNG KPPKLHVVPD TSSLSLKVCI QVDHANGNQN CSDASTEETP LVGKYDKENN NKEGLEIPCA DETLCTSVRN QISDEHPEVP LIDEIETSQA
0801: KEATIEEPAE YYEDQWSPKM SNTVHREAKT YGEDKMFSFV DEACLQSEQE KIAELPSEML IHKEMERFGI EEKESLHEDS QDEDVYWDAG SPEKETSVTS
0901: DTDANENDEA EVLNVFVADS DLTENNVRTC ATSAKHSDKL PESQESLLEP QELANNMDII EDFVSHGNQK EAKNTLLGNS ETTLVEKTLN HDKEGQTSAE
1001: TGATRGLNDV YAEIIAKNNR VGNVLHSGAE VITDDYNDHT TCSKDMHASF SEACASMHHL PQNAESISAL TSDESISFLV NLEENCIKAD SEYSTIRDTA
1101: LQGKKTGGKI EEGDGKDKMS SVNLKDQRSF GEDSASKFVQ KSRKETSDAQ RIEGRDDIRK AESEIEKDVS LRPDKDKERE YKMEKEQSKE KPIRELEEEK
1201: ERERERAKDR LAVQRATREA HERAFAEART KAERIALERI TSSRQRASAE ARAKEKASDE AVAEKASREA RIKVERAAVE RATAEARERA IEKAKAAADA
1301: KERIEKARVP FKDSFKATNQ DTQFQKTASN EHGRSTDSCN QASEFESALR HKARSERHQR TAERAEKALA EKNMRDMLTQ REQTEKHRLA EFLDPEVKRW
1401: SNGKEGNLRA LLSTLQYILG SDSGWQSVPL TDLITAAAVK KAYRKATLCV HPDKLQQRGA TIRQKYICEK VFDLLKEAWN KFNSGER
0101: AEPEGMPEEI ESWSGSSRSS IRKESAEMDA EPSLLYQHYP NVVYDQQFDE EQFSPISFPP DGEQQFNMSY NKATRGRLDD LVEMTTCMVE PSISYVVDSC
0201: NLSNDSATNH VPVMHNGALA NGEDKEMSPP PLPASGDSVA DEKQHISPCL PIYENHYEDK KDHRRSSIHS ASSEENNGAT ANDENKETSP PQLPVNGDPV
0301: TDEKQQHIST CLLNSENLHE DEKDHKRSSS THSASSEEVP SPDYPFLRMS NTHIQTPPIN VQPPSILPSN FLNKKESKSN RDSEVNPNSA AADAIKEATN
0401: VKQNISTCLL NSENLYEDEK DHKRSSTHSA SSEEVPSPDY PFLRVSNTHI QTPPIKEAMD FAEARLKAAK ELMERKGDSF KLRKRPGHHR GTKSTEIKED
0501: KGPEEVNIFE EKLTSRKLAE EENYENLSFL DKHRGSSAVK IADCYQDGKG VLSPGKPQQI IQSDSKLDQL GKWASDAEFY DLVSHHRKST TSTAACEGDN
0601: GPTTNPFTKH GHSEKVKEGV NAGDLERDGK LSGCNEITEL GNIHVDLIAD DTAALGVEHE APTAPEGSLW EERVVYQETN DSHIKEHVGQ SNSPKGHDDD
0701: GIFEASCMNG KPPKLHVVPD TSSLSLKVCI QVDHANGNQN CSDASTEETP LVGKYDKENN NKEGLEIPCA DETLCTSVRN QISDEHPEVP LIDEIETSQA
0801: KEATIEEPAE YYEDQWSPKM SNTVHREAKT YGEDKMFSFV DEACLQSEQE KIAELPSEML IHKEMERFGI EEKESLHEDS QDEDVYWDAG SPEKETSVTS
0901: DTDANENDEA EVLNVFVADS DLTENNVRTC ATSAKHSDKL PESQESLLEP QELANNMDII EDFVSHGNQK EAKNTLLGNS ETTLVEKTLN HDKEGQTSAE
1001: TGATRGLNDV YAEIIAKNNR VGNVLHSGAE VITDDYNDHT TCSKDMHASF SEACASMHHL PQNAESISAL TSDESISFLV NLEENCIKAD SEYSTIRDTA
1101: LQGKKTGGKI EEGDGKDKMS SVNLKDQRSF GEDSASKFVQ KSRKETSDAQ RIEGRDDIRK AESEIEKDVS LRPDKDKERE YKMEKEQSKE KPIRELEEEK
1201: ERERERAKDR LAVQRATREA HERAFAEART KAERIALERI TSSRQRASAE ARAKEKASDE AVAEKASREA RIKVERAAVE RATAEARERA IEKAKAAADA
1301: KERIEKARVP FKDSFKATNQ DTQFQKTASN EHGRSTDSCN QASEFESALR HKARSERHQR TAERAEKALA EKNMRDMLTQ REQTEKHRLA EFLDPEVKRW
1401: SNGKEGNLRA LLSTLQYILG SDSGWQSVPL TDLITAAAVK KAYRKATLCV HPDKLQQRGA TIRQKYICEK VFDLLKEAWN KFNSGER
0001: MEYEKSPTAT TFSRKISNNR SHSLSFSANA VYDGVFSSPV NSKSPLVDYG EIFRGSGPSP SSIPFLDVPE LNVGKVKVDV RSSKLDYSSV FGGLGACDFA
0101: VTPKEVIIKS EKKTSINEDK KRNRRKGGNS SDVPLCNEGK KSPEMVRMKH SDISYHQTVP RNENGATHLT QVPATMPGPI PTQVVDNTSL LHKIESKSTP
0201: IPAVEKKLPC NEGREEVKAS RKQGSKTEVD FENIFARDGC STRDDSTCKT VSNGEYRDVK PPSSFQCTLN GEHGASERLS GLNSGPSERY ETEDADSPSS
0301: PPYFDAETDE NSVAAESSAA LKKAIEEAQI RMNIAKQMME KKKSGFRSCA KLKSCDDSKI ENKGNTKVEG ITEESRDNNS QILGEMVKPS EQSFSNEGDQ
0401: HAKRARKLWG VPEGLLKSTS DHKPEELEEQ DIITLEEEQA RRGRKHWELP GGIFKSVMNS KQQEPENLAP AKPEPDTKQE VQPITENPFY TFGQLGSKLK
0501: CVVEAFTGSK VSQKDEKQFT EKENSTVTQM VQDEESDSQE MLAGIPVIET YLREVEETPQ QTESKSEMNI EEKSESTICA FTERSSQNME KETGWQVKSA
0601: CKFEDGSGVK DFQENGDHTC NVLDQEGEKE IVSEPQEMLV GPDDSKTYVR EVEETPTPSL NKTQSDDSVG AMVSFNRVNI SEPGNIDEVQ EAVHKVPRRR
0701: RVWKTSEDVY NMIKAPKGNN RPWQLESAEN ETTAMSFHEE GVRIHHASEE IESTSGQASD SGLQENWTVL KQMFRQMFQT ADTKGEDETY CLVESERGHL
0801: DIHQKAQEKY EQVEVETVRT NYEAYAHTRE NEDESAQETY CRKEDGKVEV QGKTSLVREL IGEELEMASL EEEDVQEASE EAGWVQGLSE LNEINEHADS
0901: HAEMLEYDRS ETDSNNSRER FDQTQEQAEE TMIDGSIDTD TSRSSFEMRQ GDSYIEEVGI EQHRSDQFPE KASAVSNTEE HIEEIDSDSI QSGWSVVEDD
1001: DRSLQDGGAS QAESKHDELE ETKEESDEMK TSLGVERNGD KKELEHQFEC QENETYRSNV EAAESSCRFP NGEEIIGAAT NGNMKENEGE EGEESCRSSM
1101: EEEGDATSDI GAATDGNMKE NEGEESCRSS MEEEGDATSD ISQNKAETVE EHLKKIDETR EKERERKQER VMVERAIREA RERAFADAME RAGKTAMEKA
1201: KAVAHRREVP RKSEKGSVEV NDKLSSAEKA SMQAKLRAER AAVERAITEV RERAMEKALS GKSAASQAKS YGGSKSFSSS GERRGSSSSQ GTENKSSGPS
1301: NSSNQTAKGE PIQRCKARSE RHQRTSDRAA EALAEKKLRD LKTQKEQTER NRLAEALDAD VKRWSSGKEN NLRALISTLQ YILGAESGWK PIPLTDLVSS
1401: ASVRKAYRKA TLYVHPDKLQ QRGASTQQKY ICEKVFDLLK EAWNKFGADE R
0101: VTPKEVIIKS EKKTSINEDK KRNRRKGGNS SDVPLCNEGK KSPEMVRMKH SDISYHQTVP RNENGATHLT QVPATMPGPI PTQVVDNTSL LHKIESKSTP
0201: IPAVEKKLPC NEGREEVKAS RKQGSKTEVD FENIFARDGC STRDDSTCKT VSNGEYRDVK PPSSFQCTLN GEHGASERLS GLNSGPSERY ETEDADSPSS
0301: PPYFDAETDE NSVAAESSAA LKKAIEEAQI RMNIAKQMME KKKSGFRSCA KLKSCDDSKI ENKGNTKVEG ITEESRDNNS QILGEMVKPS EQSFSNEGDQ
0401: HAKRARKLWG VPEGLLKSTS DHKPEELEEQ DIITLEEEQA RRGRKHWELP GGIFKSVMNS KQQEPENLAP AKPEPDTKQE VQPITENPFY TFGQLGSKLK
0501: CVVEAFTGSK VSQKDEKQFT EKENSTVTQM VQDEESDSQE MLAGIPVIET YLREVEETPQ QTESKSEMNI EEKSESTICA FTERSSQNME KETGWQVKSA
0601: CKFEDGSGVK DFQENGDHTC NVLDQEGEKE IVSEPQEMLV GPDDSKTYVR EVEETPTPSL NKTQSDDSVG AMVSFNRVNI SEPGNIDEVQ EAVHKVPRRR
0701: RVWKTSEDVY NMIKAPKGNN RPWQLESAEN ETTAMSFHEE GVRIHHASEE IESTSGQASD SGLQENWTVL KQMFRQMFQT ADTKGEDETY CLVESERGHL
0801: DIHQKAQEKY EQVEVETVRT NYEAYAHTRE NEDESAQETY CRKEDGKVEV QGKTSLVREL IGEELEMASL EEEDVQEASE EAGWVQGLSE LNEINEHADS
0901: HAEMLEYDRS ETDSNNSRER FDQTQEQAEE TMIDGSIDTD TSRSSFEMRQ GDSYIEEVGI EQHRSDQFPE KASAVSNTEE HIEEIDSDSI QSGWSVVEDD
1001: DRSLQDGGAS QAESKHDELE ETKEESDEMK TSLGVERNGD KKELEHQFEC QENETYRSNV EAAESSCRFP NGEEIIGAAT NGNMKENEGE EGEESCRSSM
1101: EEEGDATSDI GAATDGNMKE NEGEESCRSS MEEEGDATSD ISQNKAETVE EHLKKIDETR EKERERKQER VMVERAIREA RERAFADAME RAGKTAMEKA
1201: KAVAHRREVP RKSEKGSVEV NDKLSSAEKA SMQAKLRAER AAVERAITEV RERAMEKALS GKSAASQAKS YGGSKSFSSS GERRGSSSSQ GTENKSSGPS
1301: NSSNQTAKGE PIQRCKARSE RHQRTSDRAA EALAEKKLRD LKTQKEQTER NRLAEALDAD VKRWSSGKEN NLRALISTLQ YILGAESGWK PIPLTDLVSS
1401: ASVRKAYRKA TLYVHPDKLQ QRGASTQQKY ICEKVFDLLK EAWNKFGADE R
Arabidopsis Description
AUL1auxin-like 1 protein [Source:TAIR;Acc:AT1G75310]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.