Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- nucleus 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G041000.2 | Wheat | nucleus, plastid | 96.24 | 96.69 |
| TraesCS4D01G261900.1 | Wheat | nucleus, plastid | 96.87 | 96.11 |
| HORVU4Hr1G070720.5 | Barley | mitochondrion | 94.98 | 89.25 |
| Os03t0198300-02 | Rice | nucleus | 66.61 | 70.02 |
| EER95331 | Sorghum | nucleus, plastid | 61.29 | 66.38 |
| Zm00001d048175_P002 | Maize | nucleus | 61.13 | 65.44 |
| GSMUA_Achr7P25970_001 | Banana | nucleus | 38.71 | 35.75 |
| KRH61195 | Soybean | nucleus | 27.27 | 27.49 |
| CDX73142 | Canola | nucleus | 24.14 | 26.01 |
| CDY45410 | Canola | nucleus | 24.14 | 25.93 |
| VIT_18s0001g12100.t01 | Wine grape | nucleus | 30.88 | 25.72 |
| Bra015866.1-P | Field mustard | nucleus | 25.08 | 25.08 |
| KRH51877 | Soybean | nucleus | 27.43 | 24.31 |
| PGSC0003DMT400071608 | Potato | nucleus | 26.33 | 24.07 |
| AT1G75100.1 | Thale cress | nucleus | 23.98 | 23.5 |
| Solyc04g080040.2.1 | Tomato | nucleus | 26.18 | 23.07 |
| PGSC0003DMT400071606 | Potato | nucleus | 14.73 | 16.7 |
| CDY59467 | Canola | mitochondrion | 22.1 | 14.26 |
| TraesCS5B01G098600.2 | Wheat | nucleus | 17.24 | 12.33 |
| TraesCS4B01G126200.1 | Wheat | nucleus | 15.36 | 10.49 |
| TraesCS3B01G258000.2 | Wheat | nucleus | 17.08 | 7.33 |
| TraesCS1B01G449600.1 | Wheat | nucleus | 16.77 | 6.92 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G261900.1 | EnsemblPlantsGene:TraesCS4B01G261900 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:IPR001623 | InterPro:IPR036869 |
| InterPro:J_dom_sf | PANTHER:PTHR23172 | PANTHER:PTHR23172:SF55 | SEG:seg | SUPFAM:SSF46565 | TIGR:cd06257 |
| MapMan:20.5.7 | MapMan:22.1.6.4 | : | : | : | : |
Description
No Description!
Coordinates
chr4B:-:531050019..531056166
Molecular Weight (calculated)
70070.9 Da
IEP (calculated)
8.082
GRAVY (calculated)
-0.886
Length
638 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGAPRRSDV DFADVFGGPP RRSSGSDRGR RSSLDSPSGS ASRARSGAEE RPVFGDRTSS GFASRERRSG GESGPGERPV FGDRTSSERR QLGQEFYKDI
101: FPGGEPTSPR RGGASGDRDV FGAPTSPGGS TSRLLSRSSF SMKFTRGVDS SVPTSPSRHI SNRNDDDTSY GYSVPASPNS STNSSLAQGV SQQDSKKNPF
201: SWHRYPFLSR FRSSGDKKDT SQHVNSMDSE CEGTPISSAS FISSDKFHFS FYKWAGKGAL LMLPASVQEK DGNIIGVRSF PQVIVQGIDL IDEEESMSTA
301: TPASKSQTDY EDYKSGKDGL FERKHSINST TKEESSVFDE YLQGDKSKEA GTKKSINNAK SNVSAGSPRT QSSRPPSGEK SRGSRVLKDF IKIFSPEVSP
401: KRKAAVEAQD QSSGKNGSKG GVEDKFSISD LETGEDIKTD KTNSQNAFSP AAAQMRDVQG RMEKPVLTVD DEMLTRTGKL SGKEDVKPLS SDKPFHVETE
501: QKVRDTTSRE ESHMENLEEC VVEHLDEDQI LQDDNEKEQI KISQSKIREW SKGKEGNIRS LLSTLQYVLW PESGWKPVPL VNIIEGAAVK KAYQKALLCL
601: HPDKLQQRGA AMHQKYIAEK VFEILQEAWK EFNSVTFG
101: FPGGEPTSPR RGGASGDRDV FGAPTSPGGS TSRLLSRSSF SMKFTRGVDS SVPTSPSRHI SNRNDDDTSY GYSVPASPNS STNSSLAQGV SQQDSKKNPF
201: SWHRYPFLSR FRSSGDKKDT SQHVNSMDSE CEGTPISSAS FISSDKFHFS FYKWAGKGAL LMLPASVQEK DGNIIGVRSF PQVIVQGIDL IDEEESMSTA
301: TPASKSQTDY EDYKSGKDGL FERKHSINST TKEESSVFDE YLQGDKSKEA GTKKSINNAK SNVSAGSPRT QSSRPPSGEK SRGSRVLKDF IKIFSPEVSP
401: KRKAAVEAQD QSSGKNGSKG GVEDKFSISD LETGEDIKTD KTNSQNAFSP AAAQMRDVQG RMEKPVLTVD DEMLTRTGKL SGKEDVKPLS SDKPFHVETE
501: QKVRDTTSRE ESHMENLEEC VVEHLDEDQI LQDDNEKEQI KISQSKIREW SKGKEGNIRS LLSTLQYVLW PESGWKPVPL VNIIEGAAVK KAYQKALLCL
601: HPDKLQQRGA AMHQKYIAEK VFEILQEAWK EFNSVTFG
001: MQTLPSSETV LLGSNSAPPV LRSPGGDDVD IDFGDVFGGP PKRRSKVTSN EVTRHSFSES ALRRRDVIVD VGDLLPQDEK PVFGEDTSSV RRRFTTDDFF
101: DDIFRVNESS SLPGSRILSP AHKPESSSGT SSPSQFSLPA KATEIPTFNL AATRSLNKNK ETVSSSPLSR TSSKADVVST AKSYSDDCDD PPQVFVTGKG
201: RQFHFSIYKW PNKGVPVVIW GSSRLSSMSK AEETTPVPLS DYRKTSVVEK LGKNEEGDGK SGLSGLKDVK KTSLKRPGVQ TKEEKTETDL KSEQAFFGVS
301: KAREANVKPL DSVESEQAFS GVSKAHEATT VKPLHSIFHE EDERQDEKIV SEREVRKGKS KAKNTRSFTE DSRTKKKSQG TKSSLDSSPI PDKSSFASSS
401: AAPEVGKDGV KGKVSDFVKI FSKGASVGAG GESLGQSSRW RAKETPKTDI IHDGSNAKET VNIPDQQKKS TPDIPAMNRD QKPSQSTQKK DSDRESMNYK
501: APGDTVQEER QEPSTTHTTS EDIDEPFHVN FDVEDITQDE NKMEEANKDA EEIKNIDAKI RKWSSGKSGN IRSLLSTLQY ILWSGSGWKP VPLMDMIEGN
601: AVRKSYQRAL LILHPDKLQQ KGASANQKYM AEKVFELLQE AWDHFNTLGP V
101: DDIFRVNESS SLPGSRILSP AHKPESSSGT SSPSQFSLPA KATEIPTFNL AATRSLNKNK ETVSSSPLSR TSSKADVVST AKSYSDDCDD PPQVFVTGKG
201: RQFHFSIYKW PNKGVPVVIW GSSRLSSMSK AEETTPVPLS DYRKTSVVEK LGKNEEGDGK SGLSGLKDVK KTSLKRPGVQ TKEEKTETDL KSEQAFFGVS
301: KAREANVKPL DSVESEQAFS GVSKAHEATT VKPLHSIFHE EDERQDEKIV SEREVRKGKS KAKNTRSFTE DSRTKKKSQG TKSSLDSSPI PDKSSFASSS
401: AAPEVGKDGV KGKVSDFVKI FSKGASVGAG GESLGQSSRW RAKETPKTDI IHDGSNAKET VNIPDQQKKS TPDIPAMNRD QKPSQSTQKK DSDRESMNYK
501: APGDTVQEER QEPSTTHTTS EDIDEPFHVN FDVEDITQDE NKMEEANKDA EEIKNIDAKI RKWSSGKSGN IRSLLSTLQY ILWSGSGWKP VPLMDMIEGN
601: AVRKSYQRAL LILHPDKLQQ KGASANQKYM AEKVFELLQE AWDHFNTLGP V
Arabidopsis Description
JAC1JAC1 [Source:UniProtKB/TrEMBL;Acc:A0A178WHU1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.