Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- nucleus 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G261900.1 | Wheat | nucleus, plastid | 96.69 | 96.24 |
| TraesCS4D01G261900.1 | Wheat | nucleus, plastid | 97.01 | 95.8 |
| HORVU4Hr1G070720.5 | Barley | mitochondrion | 94.8 | 88.66 |
| Os03t0198300-02 | Rice | nucleus | 65.83 | 68.86 |
| EER95331 | Sorghum | nucleus, plastid | 60.63 | 65.36 |
| Zm00001d048175_P002 | Maize | nucleus | 60.31 | 64.26 |
| GSMUA_Achr7P25970_001 | Banana | nucleus | 38.74 | 35.6 |
| KRH61195 | Soybean | nucleus | 27.4 | 27.49 |
| CDX73142 | Canola | nucleus | 24.09 | 25.84 |
| CDY45410 | Canola | nucleus | 24.09 | 25.76 |
| VIT_18s0001g12100.t01 | Wine grape | nucleus | 30.24 | 25.07 |
| Bra015866.1-P | Field mustard | nucleus | 25.04 | 24.92 |
| PGSC0003DMT400071608 | Potato | nucleus | 26.46 | 24.07 |
| KRH51877 | Soybean | nucleus | 27.09 | 23.89 |
| AT1G75100.1 | Thale cress | nucleus | 24.25 | 23.66 |
| Solyc04g080040.2.1 | Tomato | nucleus | 26.3 | 23.07 |
| PGSC0003DMT400071606 | Potato | nucleus | 14.8 | 16.7 |
| CDY59467 | Canola | mitochondrion | 22.2 | 14.26 |
| TraesCS5A01G092500.2 | Wheat | nucleus | 17.48 | 12.44 |
| TraesCS4A01G169200.1 | Wheat | nucleus | 16.22 | 10.91 |
| TraesCS3A01G226500.1 | Wheat | nucleus | 17.64 | 7.37 |
| TraesCS1A01G419500.1 | Wheat | nucleus | 14.02 | 6.46 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G041000.2 | EnsemblPlantsGene:TraesCS4A01G041000 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:IPR001623 | InterPro:IPR036869 |
| InterPro:J_dom_sf | PANTHER:PTHR23172 | PANTHER:PTHR23172:SF55 | SEG:seg | SUPFAM:SSF46565 | TIGR:cd06257 |
| MapMan:20.5.7 | MapMan:22.1.6.4 | : | : | : | : |
Description
No Description!
Coordinates
chr4A:-:34249915..34254989
Molecular Weight (calculated)
69410.0 Da
IEP (calculated)
7.348
GRAVY (calculated)
-0.874
Length
635 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGAPRRSDV DFADVFGGPP RRSSGSDRGR RSSLDSPSGS GSGSGAASRA RSGAEERPAF GDRTSSGFAS RERRSGGESG PGERPVFGDR TSSERRQLGQ
101: EFYKDIFPGA EPPASPRPGG ASGDRDVFGA PTSPGGSTSR LLSRSSFSMK FTRGVDSSVP TSPSRHISSR NDDDTSYGYS VPASPNSSTN SSLAQGVSQQ
201: DSKKNPFSWH RYPFLSRFRS SGDKKDTSQH VNSMDSECEG TPISSASFIS SDKFHFSFYK WRGKGALLML PASVQEKDGN IIGVRSFPQV VVQGIDLIDE
301: EESMSTATPA SKSQTDYEDY KHSINSTTKE ESSVFDEYLQ GDKSKEAGTK KSINNAKSNV SAGSPRTQSS RPPSGEKSRG SRVLKDFIKI FSPEVSPKRK
401: VAVEAQDQSS GKSGSKGGVE DKFSISDLET GEDIKTDKTN NQNAFSPAAA QMRDVQGRME KPVLTVDDEM LTRTGKLSGK EDVKPPSSDK SFHVETEEKV
501: RDTTSREESH MENLEECVVE HLDEDQILQD DNEKEQIKIS QSKIREWSKG KEGNIRSLLS TLQYVLWPES GWKPVPLVNI IEGAAVKKAY QKALLCLHPD
601: KLQQRGAAMH QKYIAEKVFE ILQEAWKEFN SVTFG
101: EFYKDIFPGA EPPASPRPGG ASGDRDVFGA PTSPGGSTSR LLSRSSFSMK FTRGVDSSVP TSPSRHISSR NDDDTSYGYS VPASPNSSTN SSLAQGVSQQ
201: DSKKNPFSWH RYPFLSRFRS SGDKKDTSQH VNSMDSECEG TPISSASFIS SDKFHFSFYK WRGKGALLML PASVQEKDGN IIGVRSFPQV VVQGIDLIDE
301: EESMSTATPA SKSQTDYEDY KHSINSTTKE ESSVFDEYLQ GDKSKEAGTK KSINNAKSNV SAGSPRTQSS RPPSGEKSRG SRVLKDFIKI FSPEVSPKRK
401: VAVEAQDQSS GKSGSKGGVE DKFSISDLET GEDIKTDKTN NQNAFSPAAA QMRDVQGRME KPVLTVDDEM LTRTGKLSGK EDVKPPSSDK SFHVETEEKV
501: RDTTSREESH MENLEECVVE HLDEDQILQD DNEKEQIKIS QSKIREWSKG KEGNIRSLLS TLQYVLWPES GWKPVPLVNI IEGAAVKKAY QKALLCLHPD
601: KLQQRGAAMH QKYIAEKVFE ILQEAWKEFN SVTFG
001: MQTLPSSETV LLGSNSAPPV LRSPGGDDVD IDFGDVFGGP PKRRSKVTSN EVTRHSFSES ALRRRDVIVD VGDLLPQDEK PVFGEDTSSV RRRFTTDDFF
101: DDIFRVNESS SLPGSRILSP AHKPESSSGT SSPSQFSLPA KATEIPTFNL AATRSLNKNK ETVSSSPLSR TSSKADVVST AKSYSDDCDD PPQVFVTGKG
201: RQFHFSIYKW PNKGVPVVIW GSSRLSSMSK AEETTPVPLS DYRKTSVVEK LGKNEEGDGK SGLSGLKDVK KTSLKRPGVQ TKEEKTETDL KSEQAFFGVS
301: KAREANVKPL DSVESEQAFS GVSKAHEATT VKPLHSIFHE EDERQDEKIV SEREVRKGKS KAKNTRSFTE DSRTKKKSQG TKSSLDSSPI PDKSSFASSS
401: AAPEVGKDGV KGKVSDFVKI FSKGASVGAG GESLGQSSRW RAKETPKTDI IHDGSNAKET VNIPDQQKKS TPDIPAMNRD QKPSQSTQKK DSDRESMNYK
501: APGDTVQEER QEPSTTHTTS EDIDEPFHVN FDVEDITQDE NKMEEANKDA EEIKNIDAKI RKWSSGKSGN IRSLLSTLQY ILWSGSGWKP VPLMDMIEGN
601: AVRKSYQRAL LILHPDKLQQ KGASANQKYM AEKVFELLQE AWDHFNTLGP V
101: DDIFRVNESS SLPGSRILSP AHKPESSSGT SSPSQFSLPA KATEIPTFNL AATRSLNKNK ETVSSSPLSR TSSKADVVST AKSYSDDCDD PPQVFVTGKG
201: RQFHFSIYKW PNKGVPVVIW GSSRLSSMSK AEETTPVPLS DYRKTSVVEK LGKNEEGDGK SGLSGLKDVK KTSLKRPGVQ TKEEKTETDL KSEQAFFGVS
301: KAREANVKPL DSVESEQAFS GVSKAHEATT VKPLHSIFHE EDERQDEKIV SEREVRKGKS KAKNTRSFTE DSRTKKKSQG TKSSLDSSPI PDKSSFASSS
401: AAPEVGKDGV KGKVSDFVKI FSKGASVGAG GESLGQSSRW RAKETPKTDI IHDGSNAKET VNIPDQQKKS TPDIPAMNRD QKPSQSTQKK DSDRESMNYK
501: APGDTVQEER QEPSTTHTTS EDIDEPFHVN FDVEDITQDE NKMEEANKDA EEIKNIDAKI RKWSSGKSGN IRSLLSTLQY ILWSGSGWKP VPLMDMIEGN
601: AVRKSYQRAL LILHPDKLQQ KGASANQKYM AEKVFELLQE AWDHFNTLGP V
Arabidopsis Description
JAC1JAC1 [Source:UniProtKB/TrEMBL;Acc:A0A178WHU1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.