Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G427300.1 | Wheat | nucleus | 94.7 | 84.4 |
| TraesCS1B01G449600.1 | Wheat | nucleus | 94.12 | 83.78 |
| HORVU1Hr1G091570.1 | Barley | nucleus | 88.89 | 81.38 |
| GSMUA_Achr3P15350_001 | Banana | nucleus | 14.81 | 57.95 |
| EES18741 | Sorghum | nucleus | 47.78 | 45.19 |
| Zm00001d039120_P002 | Maize | nucleus | 48.8 | 44.21 |
| TraesCS3A01G226500.1 | Wheat | nucleus | 38.34 | 34.76 |
| GSMUA_Achr7P25560_001 | Banana | nucleus | 23.24 | 24.3 |
| TraesCS5A01G092500.2 | Wheat | nucleus | 15.25 | 23.54 |
| CDX75581 | Canola | nucleus | 20.19 | 23.15 |
| CDX69230 | Canola | nucleus | 20.48 | 23.13 |
| VIT_04s0023g02070.t01 | Wine grape | nucleus | 24.18 | 22.89 |
| Bra011688.1-P | Field mustard | nucleus | 20.62 | 22.68 |
| KRH28713 | Soybean | nucleus | 22.8 | 22.62 |
| GSMUA_Achr1P13920_001 | Banana | nucleus | 22.8 | 22.02 |
| KRH69887 | Soybean | nucleus | 22.8 | 21.81 |
| Solyc02g085030.2.1 | Tomato | nucleus | 22.15 | 21.71 |
| KRH76753 | Soybean | nucleus | 21.93 | 21.51 |
| PGSC0003DMT400009048 | Potato | nucleus | 22.29 | 21.28 |
| Solyc04g080600.2.1 | Tomato | nucleus | 23.09 | 21.05 |
| TraesCS4A01G169200.1 | Wheat | nucleus | 14.38 | 20.97 |
| VIT_18s0001g12770.t01 | Wine grape | nucleus | 20.55 | 20.95 |
| AT4G36520.1 | Thale cress | nucleus, plastid | 20.91 | 20.25 |
| PGSC0003DMT400009477 | Potato | nucleus | 23.09 | 20.0 |
| KRH70946 | Soybean | nucleus | 18.66 | 19.38 |
| KRH75084 | Soybean | nucleus | 18.74 | 19.28 |
| CDX73162 | Canola | nucleus | 19.03 | 18.9 |
| CDY45424 | Canola | nucleus | 19.17 | 18.38 |
| AT1G75310.2 | Thale cress | nucleus | 19.03 | 18.06 |
| Bra015852.1-P | Field mustard | nucleus | 19.1 | 17.71 |
| TraesCS4A01G041000.2 | Wheat | nucleus, plastid | 6.46 | 14.02 |
| KRH08235 | Soybean | nucleus | 6.54 | 11.22 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G419500.1 | EnsemblPlantsGene:TraesCS1A01G419500 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:IPR001623 | InterPro:IPR036869 |
| InterPro:J_dom_sf | ncoils:Coil | PANTHER:PTHR23172 | PANTHER:PTHR23172:SF42 | PFscan:PS50076 | SEG:seg |
| SUPFAM:SSF46565 | TIGR:cd06257 | MapMan:22.1.6.4 | : | : | : |
Description
No Description!
Coordinates
chr1A:+:576345882..576350730
Molecular Weight (calculated)
152753.0 Da
IEP (calculated)
5.204
GRAVY (calculated)
-1.015
Length
1377 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSYYKTTQAK PDDLVEMTTC TVHPSVDYVV GSSNFSPAPA TNHVSKMDNG IMANGDRGKK SPSTSVTANV RGPESDFTFD QKLHIPECPP LSENVSANGS
0101: NQKSDSHATP SNGKPFADYA FMRVSTPTVQ TQPKVPLPPL GQQPKVLNKK ESAAKEDFHF ANHSGTPTSV HTPTSTKLAR AEKRADAALS NTEANPSSAA
0201: AAMKEAMEYA EARLRAAKEL MERKGDSFKI RKRPSHHRST RSVEIKAPVE VYAFEENLSV KNPATEENNS ENFVFDRHQQ VSAVRSNHHD DSGKMVLPLK
0301: KPQQMMRTHT MPCQTSSNIE KLGNWRSGDE YFELTGDYQK CQTGTVREKE DNCGRSKPVT EPSEGQKAKT KVTTQGSDLE RYEKLWDVSD ASDLGVKEEK
0401: QKELSTAPME KGEDRVSTVL ETSTGNMAHK GVDNTQLEGL LIVENSKGSH DDGSFELPCM SEITPEVDFI KDVPNSLSAS SSANYATDLG NSSMSEGSVT
0501: GTSEEPKNSE GGLEVRYDDE MQCISGSSKT SQEPPEVANV GNSQASQIKS LILEELEGSC VTQASPRVQS KSELEAETYG REKFSFVGES YLHNENEKII
0601: EVPRESLISE VEKAEGEVEL RPHAHSEESV PDEDVECPEE SDITQQTNNP VVSTMLNVFE IASKFIKGDL DQEIQGSLGP VEVKNRTEEG TDRLESDGKG
0701: KEAEKPHSEN SEKTDVEAES AHDTDRHESD CESKEAENST SENSVKTDAE EESAHANQEE PTTSASDTNK GESVVDAQGN ITVDEMGSAA SSGDEVTIKS
0801: ANDGPTRLTV NTTFDEMGSA ASSGDEVAIK SANDGPTRLT VNTKDEPTSC SEMSTGLQQL PKNVESATSQ TSNANVPGAD KTKEACKEAE RELATTFEEN
0901: GSVNRMEGKD SRERRSKAEP KHQHTHLEKI DSATSRTSYE NVPVVDKTKE VCKEAERELP TERCTIFEEK SRVNKMEGKV SRERISMAEP KHQHSHLEKS
1001: DSVPKPAERP SPVSAEVSGK ETPRVQRTKE RGSITEKERE KKDKEASRRL EEAKERQKTL EKEIENAEVN ERKKMEEEER EREKEREKDK LAVERATREA
1101: QAVERAIREA HERSFNEARE KAEKMALERI AAARQRASAE AKLKEERANA EARIKAERAA VERATAEARE RAIKKAKAEK AAAEARERRE QIRSSSKIQT
1201: LVLDEQDVRQ DNQFQRATSS GYVRNTDSSS KVVDSESALR HKARIERHQR TTERVSKALA EKNMRDLMAQ REQAEKNRLA DFLDPEVKRW SNGKEGNLRA
1301: LLSTLQYILG ADSGWQPVPL TDLITAAAVK KAYRKATLCV HPDKVQQRGA TIRQKYICEK VFDLLKDAWN KFTSEER
0101: NQKSDSHATP SNGKPFADYA FMRVSTPTVQ TQPKVPLPPL GQQPKVLNKK ESAAKEDFHF ANHSGTPTSV HTPTSTKLAR AEKRADAALS NTEANPSSAA
0201: AAMKEAMEYA EARLRAAKEL MERKGDSFKI RKRPSHHRST RSVEIKAPVE VYAFEENLSV KNPATEENNS ENFVFDRHQQ VSAVRSNHHD DSGKMVLPLK
0301: KPQQMMRTHT MPCQTSSNIE KLGNWRSGDE YFELTGDYQK CQTGTVREKE DNCGRSKPVT EPSEGQKAKT KVTTQGSDLE RYEKLWDVSD ASDLGVKEEK
0401: QKELSTAPME KGEDRVSTVL ETSTGNMAHK GVDNTQLEGL LIVENSKGSH DDGSFELPCM SEITPEVDFI KDVPNSLSAS SSANYATDLG NSSMSEGSVT
0501: GTSEEPKNSE GGLEVRYDDE MQCISGSSKT SQEPPEVANV GNSQASQIKS LILEELEGSC VTQASPRVQS KSELEAETYG REKFSFVGES YLHNENEKII
0601: EVPRESLISE VEKAEGEVEL RPHAHSEESV PDEDVECPEE SDITQQTNNP VVSTMLNVFE IASKFIKGDL DQEIQGSLGP VEVKNRTEEG TDRLESDGKG
0701: KEAEKPHSEN SEKTDVEAES AHDTDRHESD CESKEAENST SENSVKTDAE EESAHANQEE PTTSASDTNK GESVVDAQGN ITVDEMGSAA SSGDEVTIKS
0801: ANDGPTRLTV NTTFDEMGSA ASSGDEVAIK SANDGPTRLT VNTKDEPTSC SEMSTGLQQL PKNVESATSQ TSNANVPGAD KTKEACKEAE RELATTFEEN
0901: GSVNRMEGKD SRERRSKAEP KHQHTHLEKI DSATSRTSYE NVPVVDKTKE VCKEAERELP TERCTIFEEK SRVNKMEGKV SRERISMAEP KHQHSHLEKS
1001: DSVPKPAERP SPVSAEVSGK ETPRVQRTKE RGSITEKERE KKDKEASRRL EEAKERQKTL EKEIENAEVN ERKKMEEEER EREKEREKDK LAVERATREA
1101: QAVERAIREA HERSFNEARE KAEKMALERI AAARQRASAE AKLKEERANA EARIKAERAA VERATAEARE RAIKKAKAEK AAAEARERRE QIRSSSKIQT
1201: LVLDEQDVRQ DNQFQRATSS GYVRNTDSSS KVVDSESALR HKARIERHQR TTERVSKALA EKNMRDLMAQ REQAEKNRLA DFLDPEVKRW SNGKEGNLRA
1301: LLSTLQYILG ADSGWQPVPL TDLITAAAVK KAYRKATLCV HPDKVQQRGA TIRQKYICEK VFDLLKDAWN KFTSEER
0001: MEYEKSPTAT TFSRKISNNR SHSLSFSANA VYDGVFSSPV NSKSPLVDYG EIFRGSGPSP SSIPFLDVPE LNVGKVKVDV RSSKLDYSSV FGGLGACDFA
0101: VTPKEVIIKS EKKTSINEDK KRNRRKGGNS SDVPLCNEGK KSPEMVRMKH SDISYHQTVP RNENGATHLT QVPATMPGPI PTQVVDNTSL LHKIESKSTP
0201: IPAVEKKLPC NEGREEVKAS RKQGSKTEVD FENIFARDGC STRDDSTCKT VSNGEYRDVK PPSSFQCTLN GEHGASERLS GLNSGPSERY ETEDADSPSS
0301: PPYFDAETDE NSVAAESSAA LKKAIEEAQI RMNIAKQMME KKKSGFRSCA KLKSCDDSKI ENKGNTKVEG ITEESRDNNS QILGEMVKPS EQSFSNEGDQ
0401: HAKRARKLWG VPEGLLKSTS DHKPEELEEQ DIITLEEEQA RRGRKHWELP GGIFKSVMNS KQQEPENLAP AKPEPDTKQE VQPITENPFY TFGQLGSKLK
0501: CVVEAFTGSK VSQKDEKQFT EKENSTVTQM VQDEESDSQE MLAGIPVIET YLREVEETPQ QTESKSEMNI EEKSESTICA FTERSSQNME KETGWQVKSA
0601: CKFEDGSGVK DFQENGDHTC NVLDQEGEKE IVSEPQEMLV GPDDSKTYVR EVEETPTPSL NKTQSDDSVG AMVSFNRVNI SEPGNIDEVQ EAVHKVPRRR
0701: RVWKTSEDVY NMIKAPKGNN RPWQLESAEN ETTAMSFHEE GVRIHHASEE IESTSGQASD SGLQENWTVL KQMFRQMFQT ADTKGEDETY CLVESERGHL
0801: DIHQKAQEKY EQVEVETVRT NYEAYAHTRE NEDESAQETY CRKEDGKVEV QGKTSLVREL IGEELEMASL EEEDVQEASE EAGWVQGLSE LNEINEHADS
0901: HAEMLEYDRS ETDSNNSRER FDQTQEQAEE TMIDGSIDTD TSRSSFEMRQ GDSYIEEVGI EQHRSDQFPE KASAVSNTEE HIEEIDSDSI QSGWSVVEDD
1001: DRSLQDGGAS QAESKHDELE ETKEESDEMK TSLGVERNGD KKELEHQFEC QENETYRSNV EAAESSCRFP NGEEIIGAAT NGNMKENEGE EGEESCRSSM
1101: EEEGDATSDI GAATDGNMKE NEGEESCRSS MEEEGDATSD ISQNKAETVE EHLKKIDETR EKERERKQER VMVERAIREA RERAFADAME RAGKTAMEKA
1201: KAVAHRREVP RKSEKGSVEV NDKLSSAEKA SMQAKLRAER AAVERAITEV RERAMEKALS GKSAASQAKS YGGSKSFSSS GERRGSSSSG TENKSSGPSN
1301: SSNQTGEPIQ RCKARSERHQ RTSDRAAEAL AEKKLRDLKT QKEQTERNRL AEALDADVKR WSSGKENNLR ALISTLQYIL GAESGWKPIP LTDLVSSASV
1401: RKAYRKATLY VHPDKLQQRG ASTQQKYICE KVFDLLKEAW NKFGADER
0101: VTPKEVIIKS EKKTSINEDK KRNRRKGGNS SDVPLCNEGK KSPEMVRMKH SDISYHQTVP RNENGATHLT QVPATMPGPI PTQVVDNTSL LHKIESKSTP
0201: IPAVEKKLPC NEGREEVKAS RKQGSKTEVD FENIFARDGC STRDDSTCKT VSNGEYRDVK PPSSFQCTLN GEHGASERLS GLNSGPSERY ETEDADSPSS
0301: PPYFDAETDE NSVAAESSAA LKKAIEEAQI RMNIAKQMME KKKSGFRSCA KLKSCDDSKI ENKGNTKVEG ITEESRDNNS QILGEMVKPS EQSFSNEGDQ
0401: HAKRARKLWG VPEGLLKSTS DHKPEELEEQ DIITLEEEQA RRGRKHWELP GGIFKSVMNS KQQEPENLAP AKPEPDTKQE VQPITENPFY TFGQLGSKLK
0501: CVVEAFTGSK VSQKDEKQFT EKENSTVTQM VQDEESDSQE MLAGIPVIET YLREVEETPQ QTESKSEMNI EEKSESTICA FTERSSQNME KETGWQVKSA
0601: CKFEDGSGVK DFQENGDHTC NVLDQEGEKE IVSEPQEMLV GPDDSKTYVR EVEETPTPSL NKTQSDDSVG AMVSFNRVNI SEPGNIDEVQ EAVHKVPRRR
0701: RVWKTSEDVY NMIKAPKGNN RPWQLESAEN ETTAMSFHEE GVRIHHASEE IESTSGQASD SGLQENWTVL KQMFRQMFQT ADTKGEDETY CLVESERGHL
0801: DIHQKAQEKY EQVEVETVRT NYEAYAHTRE NEDESAQETY CRKEDGKVEV QGKTSLVREL IGEELEMASL EEEDVQEASE EAGWVQGLSE LNEINEHADS
0901: HAEMLEYDRS ETDSNNSRER FDQTQEQAEE TMIDGSIDTD TSRSSFEMRQ GDSYIEEVGI EQHRSDQFPE KASAVSNTEE HIEEIDSDSI QSGWSVVEDD
1001: DRSLQDGGAS QAESKHDELE ETKEESDEMK TSLGVERNGD KKELEHQFEC QENETYRSNV EAAESSCRFP NGEEIIGAAT NGNMKENEGE EGEESCRSSM
1101: EEEGDATSDI GAATDGNMKE NEGEESCRSS MEEEGDATSD ISQNKAETVE EHLKKIDETR EKERERKQER VMVERAIREA RERAFADAME RAGKTAMEKA
1201: KAVAHRREVP RKSEKGSVEV NDKLSSAEKA SMQAKLRAER AAVERAITEV RERAMEKALS GKSAASQAKS YGGSKSFSSS GERRGSSSSG TENKSSGPSN
1301: SSNQTGEPIQ RCKARSERHQ RTSDRAAEAL AEKKLRDLKT QKEQTERNRL AEALDADVKR WSSGKENNLR ALISTLQYIL GAESGWKPIP LTDLVSSASV
1401: RKAYRKATLY VHPDKLQQRG ASTQQKYICE KVFDLLKEAW NKFGADER
Arabidopsis Description
AUL1auxin-like 1 protein [Source:TAIR;Acc:AT1G75310]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.