Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G145200.4 | Wheat | nucleus | 90.04 | 96.48 |
| TraesCS4B01G126200.1 | Wheat | nucleus | 94.39 | 95.4 |
| HORVU4Hr1G033280.4 | Barley | nucleus | 88.98 | 90.23 |
| PGSC0003DMT400052312 | Potato | cytosol | 9.85 | 89.42 |
| VIT_00s0188g00150.t01 | Wine grape | cytosol | 4.13 | 84.78 |
| VIT_10s0116g01370.t01 | Wine grape | extracellular | 6.46 | 72.62 |
| Os11t0661200-01 | Rice | nucleus | 65.89 | 70.05 |
| EES08933 | Sorghum | nucleus, plastid | 66.53 | 69.09 |
| Zm00001d007692_P003 | Maize | plasma membrane | 62.71 | 66.74 |
| VIT_00s0188g00210.t01 | Wine grape | plastid | 9.32 | 54.32 |
| TraesCS5A01G092500.2 | Wheat | nucleus | 49.26 | 52.13 |
| GSMUA_Achr11P... | Banana | nucleus | 44.92 | 45.69 |
| CDY31429 | Canola | plastid | 37.29 | 43.14 |
| Bra020913.1-P | Field mustard | nucleus | 37.61 | 42.46 |
| CDX76445 | Canola | nucleus | 37.39 | 42.33 |
| KRH63993 | Soybean | nucleus, plastid | 40.78 | 42.21 |
| KRH53945 | Soybean | nucleus, plastid | 41.21 | 42.19 |
| AT4G12770.1 | Thale cress | nucleus | 39.51 | 41.86 |
| KRH40961 | Soybean | endoplasmic reticulum | 41.31 | 41.76 |
| VIT_07s0031g02350.t01 | Wine grape | nucleus, plastid | 42.37 | 41.75 |
| GSMUA_Achr3P24020_001 | Banana | nucleus | 34.64 | 40.98 |
| AT4G12780.1 | Thale cress | nucleus | 39.09 | 40.82 |
| Solyc09g018960.2.1 | Tomato | nucleus | 39.41 | 40.39 |
| KRH59609 | Soybean | nucleus | 41.53 | 39.88 |
| PGSC0003DMT400071173 | Potato | nucleus | 39.19 | 38.78 |
| Solyc06g082840.2.1 | Tomato | nucleus | 38.77 | 38.01 |
| PGSC0003DMT400052311 | Potato | nucleus | 30.72 | 34.36 |
| TraesCS4A01G041000.2 | Wheat | nucleus, plastid | 10.91 | 16.22 |
| TraesCS1A01G419500.1 | Wheat | nucleus | 20.97 | 14.38 |
| TraesCS3A01G226500.1 | Wheat | nucleus | 21.82 | 13.56 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G169200.1 | EnsemblPlantsGene:TraesCS4A01G169200 | Gene3D:1.10.287.110 | InterPro:IPR036869 | InterPro:J_dom_sf | ncoils:Coil |
| PANTHER:PTHR23172 | PANTHER:PTHR23172:SF50 | SEG:seg | SUPFAM:SSF46565 | MapMan:22.1.6.4 | : |
Description
No Description!
Coordinates
chr4A:+:425955386..425962544
Molecular Weight (calculated)
103756.0 Da
IEP (calculated)
6.395
GRAVY (calculated)
-0.947
Length
944 amino acids
Sequence
(BLAST)
(BLAST)
001: MPTSGGLHPP YTDRGCQRTC QQRERKTHHH LPPLSHHFLS PDLFPFLSPA LRRGRRRRRS RAMDGIEGLL ARDFGVRPQG KAAPMAAARG GGSAWPNPRS
101: IPAPSYDGLF GAPVPAASAS GPPLDSIFDS FKGPSSSSAA ATGTKPLFDD DFFEPVRGTR VSNSTYDSDG VSGAGAAAAP AYDVFTSSNR SAPPSYDDFL
201: GGFGGKPQAE EIKRSVVVED DDDLLGGFGM KPAREKKSVV EEDQQGNGFD DLIPGFASSS PPKSRNTNDD NKKKPAVPAS KSTASFVDDP FVVLERVSVS
301: GSAYPSPGRF TDPLEDLDKS ANAEGMSVDS AAAADSLFKD SSAFDQAPKS DPLFTSEMNG DTKDSHLQSK ARESSSVQSS VKRNPASRSS LEDFGNGMAK
401: PQSARYSDIH VDDSSERYSG NGMDNQSPIS TESEDDIWLT VSEIPLFTQP TSAPPPSRSP PLLKQKPLGA KANVEDDEYV SQSSQKHNQY KDTPEQADDS
501: SVDESEGVAM GKHQMPAYYD KNAFDDDEEF DSNSSAREER ESQERLEHAR EMRLREEQRR VEKERVLEQQ REKQAVERAT KEARERAAAE ARAKAERDAR
601: QRSHRAAVQR AHQEARERAA AEAKDRVARA AAEERERAAA EERERAAAEA RDRERPAARG RAAAERAAAE RVQQEARKRA ERVAVERAAA EARQRQAAAA
701: AAAAKEKQST PNDVESFFRM DARDTSAAKQ RAPTPTVDSM FDSQPQGRGT VNGSQRTAST SASTRKTNPP SATNIFGNGL SDLFEFESTR SSSDAFQDVE
801: GESEERRRAR LERHQRTRER AAKALAEKNE RDMQVQREQA ERDRIGGSLD FEIKRWAAGK EGNLRALLST LQYILWPECG WQAVSLTDLI TGAAVKKQYR
901: KATLCIHPDK VQQKGATLQQ KYIAEKVFDM LKEAWNKFNS EELF
101: IPAPSYDGLF GAPVPAASAS GPPLDSIFDS FKGPSSSSAA ATGTKPLFDD DFFEPVRGTR VSNSTYDSDG VSGAGAAAAP AYDVFTSSNR SAPPSYDDFL
201: GGFGGKPQAE EIKRSVVVED DDDLLGGFGM KPAREKKSVV EEDQQGNGFD DLIPGFASSS PPKSRNTNDD NKKKPAVPAS KSTASFVDDP FVVLERVSVS
301: GSAYPSPGRF TDPLEDLDKS ANAEGMSVDS AAAADSLFKD SSAFDQAPKS DPLFTSEMNG DTKDSHLQSK ARESSSVQSS VKRNPASRSS LEDFGNGMAK
401: PQSARYSDIH VDDSSERYSG NGMDNQSPIS TESEDDIWLT VSEIPLFTQP TSAPPPSRSP PLLKQKPLGA KANVEDDEYV SQSSQKHNQY KDTPEQADDS
501: SVDESEGVAM GKHQMPAYYD KNAFDDDEEF DSNSSAREER ESQERLEHAR EMRLREEQRR VEKERVLEQQ REKQAVERAT KEARERAAAE ARAKAERDAR
601: QRSHRAAVQR AHQEARERAA AEAKDRVARA AAEERERAAA EERERAAAEA RDRERPAARG RAAAERAAAE RVQQEARKRA ERVAVERAAA EARQRQAAAA
701: AAAAKEKQST PNDVESFFRM DARDTSAAKQ RAPTPTVDSM FDSQPQGRGT VNGSQRTAST SASTRKTNPP SATNIFGNGL SDLFEFESTR SSSDAFQDVE
801: GESEERRRAR LERHQRTRER AAKALAEKNE RDMQVQREQA ERDRIGGSLD FEIKRWAAGK EGNLRALLST LQYILWPECG WQAVSLTDLI TGAAVKKQYR
901: KATLCIHPDK VQQKGATLQQ KYIAEKVFDM LKEAWNKFNS EELF
001: MDDFTGLLAR DFGLKPQGKS APMASQSNSS AADFNTFASS YSFASAAGKK SDSLPVFDDL GRDGDDLLFR DVFSGPPPKY GSSGDSRSPS APAFDYDVMF
101: KEPKSKSASS MPVYDKPVYD DEDVFESIPE LKIPSTSSQS ARFENVFSSI SSSPTKHRKQ NSSPFDDLMG NNLGKKESDR EEKGSSIFDD LIPGFGRTSS
201: PPAKRTTSET TSQSQKPPYR TAETSSNVKE DPFVVLEEST STLREPSTGG FTDPLEEIGK FNSRKTDHSS VHGGVFVDTD PLDSLGKSGP DMNSRGKSHL
301: RPPGNISGSQ SPVESSGLYH SKNVSFDDVV EPQNTSTPPP TNSDGSFESS DDVWLTVSEI PLFTQPTSAP PPTRPPPPRP TRPIKKKVNE PSIPTSAYHS
401: HVPSSGRASV NSPTASQMDE LDDFSIGRNQ TAANGYPDPS SGEDSDVFST AAASAAAMKD AMDKAEAKFR HAKERREKES LKASRSREGD HTENYDSRER
501: ELREKQVRLD RERAEREAEM EKTQAREREE REREQKRIER ERERLLARQA VERATREARE RAATEAHAKV QRAAVGKVTD ARERAERAAV QRAHAEARER
601: AAAGAREKAE KAAAEARERA NAEVREKEAK VRAERAAVER AAAEARGRAA AQAKAKQQQE NNNDLDSFFN SVSRPSSVPR QRTNPPDPFQ DSWNKGGSFE
701: SSRPSSRVPS GPTENLRKAS SATNIVDDLS SIFGAPASQS GGFQDVDGET EERRRARLER HQRTQERAAK ALAEKNERDL QVQREQAEKD RIGGTLDVEI
801: RRWGAGKEGN LRALLSTLQY VLWPECGWQP VSLTDLITGA SVKKVYRKAT LCIHPDKVQQ KGANLQQKYI AEKVFDMLKE AWNKFNSEEL F
101: KEPKSKSASS MPVYDKPVYD DEDVFESIPE LKIPSTSSQS ARFENVFSSI SSSPTKHRKQ NSSPFDDLMG NNLGKKESDR EEKGSSIFDD LIPGFGRTSS
201: PPAKRTTSET TSQSQKPPYR TAETSSNVKE DPFVVLEEST STLREPSTGG FTDPLEEIGK FNSRKTDHSS VHGGVFVDTD PLDSLGKSGP DMNSRGKSHL
301: RPPGNISGSQ SPVESSGLYH SKNVSFDDVV EPQNTSTPPP TNSDGSFESS DDVWLTVSEI PLFTQPTSAP PPTRPPPPRP TRPIKKKVNE PSIPTSAYHS
401: HVPSSGRASV NSPTASQMDE LDDFSIGRNQ TAANGYPDPS SGEDSDVFST AAASAAAMKD AMDKAEAKFR HAKERREKES LKASRSREGD HTENYDSRER
501: ELREKQVRLD RERAEREAEM EKTQAREREE REREQKRIER ERERLLARQA VERATREARE RAATEAHAKV QRAAVGKVTD ARERAERAAV QRAHAEARER
601: AAAGAREKAE KAAAEARERA NAEVREKEAK VRAERAAVER AAAEARGRAA AQAKAKQQQE NNNDLDSFFN SVSRPSSVPR QRTNPPDPFQ DSWNKGGSFE
701: SSRPSSRVPS GPTENLRKAS SATNIVDDLS SIFGAPASQS GGFQDVDGET EERRRARLER HQRTQERAAK ALAEKNERDL QVQREQAEKD RIGGTLDVEI
801: RRWGAGKEGN LRALLSTLQY VLWPECGWQP VSLTDLITGA SVKKVYRKAT LCIHPDKVQQ KGANLQQKYI AEKVFDMLKE AWNKFNSEEL F
Arabidopsis Description
Auxilin-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WQ57]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.