Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400030755 | Potato | nucleus | 79.81 | 42.78 |
| VIT_00s0188g00210.t01 | Wine grape | plastid | 28.85 | 18.52 |
| HORVU5Hr1G024350.1 | Barley | plasma membrane | 94.23 | 13.28 |
| CDY31429 | Canola | plastid | 91.35 | 11.64 |
| CDX76445 | Canola | nucleus | 91.35 | 11.39 |
| Bra020913.1-P | Field mustard | nucleus | 91.35 | 11.36 |
| GSMUA_Achr3P24020_001 | Banana | nucleus | 86.54 | 11.28 |
| GSMUA_Achr2P02260_001 | Banana | nucleus | 29.81 | 11.19 |
| TraesCS5D01G104700.2 | Wheat | nucleus | 94.23 | 11.02 |
| TraesCS5A01G092500.2 | Wheat | nucleus | 94.23 | 10.99 |
| Solyc09g018960.2.1 | Tomato | nucleus | 97.12 | 10.97 |
| TraesCS5B01G098600.2 | Wheat | nucleus | 93.27 | 10.87 |
| Zm00001d041647_P004 | Maize | nucleus | 92.31 | 10.86 |
| EES17168 | Sorghum | mitochondrion, nucleus | 93.27 | 10.81 |
| AT4G12770.1 | Thale cress | nucleus | 92.31 | 10.77 |
| AT4G12780.1 | Thale cress | nucleus | 92.31 | 10.62 |
| Os12t0548200-02 | Rice | plasma membrane | 94.23 | 10.59 |
| TraesCS4D01G145200.4 | Wheat | nucleus | 89.42 | 10.56 |
| GSMUA_Achr1P26650_001 | Banana | nucleus | 88.46 | 10.48 |
| Os11t0661200-01 | Rice | nucleus | 89.42 | 10.47 |
| Zm00001d007692_P003 | Maize | plasma membrane | 87.5 | 10.26 |
| KRH40961 | Soybean | endoplasmic reticulum | 91.35 | 10.17 |
| PGSC0003DMT400071173 | Potato | nucleus | 93.27 | 10.17 |
| VIT_07s0031g02350.t01 | Wine grape | nucleus, plastid | 93.27 | 10.13 |
| EES08933 | Sorghum | nucleus, plastid | 88.46 | 10.12 |
| KRH63993 | Soybean | nucleus, plastid | 88.46 | 10.09 |
| KRH53945 | Soybean | nucleus, plastid | 89.42 | 10.09 |
| HORVU4Hr1G033280.4 | Barley | nucleus | 89.42 | 9.99 |
| GSMUA_Achr11P... | Banana | nucleus | 88.46 | 9.91 |
| TraesCS4A01G169200.1 | Wheat | nucleus | 89.42 | 9.85 |
| Zm00001d023838_P014 | Maize | mitochondrion, nucleus | 84.62 | 9.75 |
| KRH59609 | Soybean | nucleus | 91.35 | 9.66 |
| TraesCS4B01G126200.1 | Wheat | nucleus | 80.77 | 8.99 |
| PGSC0003DMT400071608 | Potato | nucleus | 57.69 | 8.6 |
| PGSC0003DMT400009048 | Potato | nucleus | 71.15 | 5.13 |
| PGSC0003DMT400009477 | Potato | nucleus | 70.19 | 4.59 |
| PGSC0003DMT400071606 | Potato | nucleus | 5.77 | 1.07 |
| PGSC0003DMT400052311 | Potato | nucleus | 2.88 | 0.36 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400052312 | EnsemblPlantsGene:PGSC0003DMG402020301 | Gene3D:1.10.287.110 | InterPro:IPR036869 | InterPro:J_dom_sf | PANTHER:PTHR23172 |
| PANTHER:PTHR23172:SF54 | PGSC:PGSC0003DMG402020301 | SUPFAM:SSF46565 | UniParc:UPI000294953F | UniProt:M1BT64 | MapMan:22.1.6.4 |
Description
Auxilin [Source:PGSC_GENE;Acc:PGSC0003DMG402020301]
Coordinates
chr9:+:36012960..36015249
Molecular Weight (calculated)
12012.6 Da
IEP (calculated)
9.169
GRAVY (calculated)
-0.266
Length
104 amino acids
Sequence
(BLAST)
(BLAST)
001: MVQRISETLD FEIKRWAAGK EGNLRALLST LQYVLWPECG WQPVSLTDLI VGASVKKVYR KATLCIHPDK VQQKGANLQQ KYIAEKVFDL LKEAWNKFNS
101: EELF
101: EELF
001: MDDFTGLLAR DFGLKPQGKS APMASQSNSS AADFNTFASS YSFATAAGKK SDSLPVFDDP GRDGDDLLFK DVFSGPPPPK YGSSSGDSRS PSAPAFDYDA
101: MFKEPKSKSA SSMPVYDKPV YDDEDVFESI PELKIPSTSS QSARFENVFS SISSSPTKHR KQNSSPFDDL MGNNLGKKGA DSDREEKGSS IFDDLIPGFG
201: RTSSPPSKRT TSETTNQSEK APYRTAETSS NVEEDPFVVL EESESTPREP SRTDPLDDIG KPGPDMNSKG KSHLRPPGNI SGSQSPPVES PGSYHSKKVS
301: FEDFLEPHNM STPPPTNSNG SFESSDDVWL TVSEIPLFTQ PTSAPPPTRP PPPRPTRPIK KKVNEPSIPT SAYHSHVPSS GRASVNSPTA SQMDELDDFS
401: IGRNQTAANG YPDPSSGEDS DVFSTAAASA AAMKDAMDKA EAKFRHAKER REKENLKASR SREGDHTENY DSRERELREK QVRLDRERAE REAEMEKAQE
501: REKEEREREQ KRIERERERL VARQAVERAT REARERAATE AHAKVQRAAV GKATDARERA ERAAVQRAHA EARERAAAGA RDKAAKAAAE AREKAEKAAA
601: EAKERANAEA REKETRVRAE RAAVERAAAE ARGRAAAQAK AKQQQENTND LDSFFSSISR PNSAPRQRTN PLDPFQDSWN KGGSFESSRE SLRVPPGQPE
701: NLRKTSSVTN IVDDLSSIFG ASASQSGGFQ DVDGETEERR RARLERHQRT QERAAKALAE KNERDLQVQR EQVEKDNKKL RHLSILSHCF FPFRIGVTLD
801: VEIKRWGAGK EGNLRALLST LQYVLWPECG WQPVSLTDLI TAASVKKVYR KATLCIHPDK VQQKGANLQQ KYIAEKVFDM LKEAWNKFNS EELF
101: MFKEPKSKSA SSMPVYDKPV YDDEDVFESI PELKIPSTSS QSARFENVFS SISSSPTKHR KQNSSPFDDL MGNNLGKKGA DSDREEKGSS IFDDLIPGFG
201: RTSSPPSKRT TSETTNQSEK APYRTAETSS NVEEDPFVVL EESESTPREP SRTDPLDDIG KPGPDMNSKG KSHLRPPGNI SGSQSPPVES PGSYHSKKVS
301: FEDFLEPHNM STPPPTNSNG SFESSDDVWL TVSEIPLFTQ PTSAPPPTRP PPPRPTRPIK KKVNEPSIPT SAYHSHVPSS GRASVNSPTA SQMDELDDFS
401: IGRNQTAANG YPDPSSGEDS DVFSTAAASA AAMKDAMDKA EAKFRHAKER REKENLKASR SREGDHTENY DSRERELREK QVRLDRERAE REAEMEKAQE
501: REKEEREREQ KRIERERERL VARQAVERAT REARERAATE AHAKVQRAAV GKATDARERA ERAAVQRAHA EARERAAAGA RDKAAKAAAE AREKAEKAAA
601: EAKERANAEA REKETRVRAE RAAVERAAAE ARGRAAAQAK AKQQQENTND LDSFFSSISR PNSAPRQRTN PLDPFQDSWN KGGSFESSRE SLRVPPGQPE
701: NLRKTSSVTN IVDDLSSIFG ASASQSGGFQ DVDGETEERR RARLERHQRT QERAAKALAE KNERDLQVQR EQVEKDNKKL RHLSILSHCF FPFRIGVTLD
801: VEIKRWGAGK EGNLRALLST LQYVLWPECG WQPVSLTDLI TAASVKKVYR KATLCIHPDK VQQKGANLQQ KYIAEKVFDM LKEAWNKFNS EELF
Arabidopsis Description
AUXI1Auxilin-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU08]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.