Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0188g00150.t01 | Wine grape | cytosol | 5.26 | 91.3 |
| PGSC0003DMT400052312 | Potato | cytosol | 11.28 | 86.54 |
| VIT_10s0116g01370.t01 | Wine grape | extracellular | 8.02 | 76.19 |
| VIT_00s0188g00210.t01 | Wine grape | plastid | 12.91 | 63.58 |
| GSMUA_Achr2P02260_001 | Banana | nucleus | 18.3 | 52.71 |
| GSMUA_Achr11P... | Banana | nucleus | 60.03 | 51.62 |
| GSMUA_Achr1P26650_001 | Banana | nucleus | 52.01 | 47.27 |
| CDY31429 | Canola | plastid | 45.49 | 44.49 |
| AT4G12770.1 | Thale cress | nucleus | 49.37 | 44.22 |
| KRH53945 | Soybean | nucleus, plastid | 50.63 | 43.82 |
| Bra020913.1-P | Field mustard | nucleus | 45.86 | 43.78 |
| CDX76445 | Canola | nucleus | 45.74 | 43.77 |
| KRH63993 | Soybean | nucleus, plastid | 50.0 | 43.75 |
| HORVU5Hr1G024350.1 | Barley | plasma membrane | 40.23 | 43.5 |
| Os12t0548200-02 | Rice | plasma membrane | 50.25 | 43.35 |
| VIT_07s0031g02350.t01 | Wine grape | nucleus, plastid | 52.01 | 43.32 |
| AT4G12780.1 | Thale cress | nucleus | 49.0 | 43.25 |
| EES17168 | Sorghum | mitochondrion, nucleus | 48.5 | 43.14 |
| Zm00001d041647_P004 | Maize | nucleus | 47.74 | 43.1 |
| TraesCS5D01G104700.2 | Wheat | nucleus | 47.87 | 42.97 |
| TraesCS5A01G092500.2 | Wheat | nucleus | 47.99 | 42.94 |
| TraesCS5B01G098600.2 | Wheat | nucleus | 47.62 | 42.6 |
| Solyc09g018960.2.1 | Tomato | nucleus | 49.0 | 42.45 |
| KRH40961 | Soybean | endoplasmic reticulum | 49.0 | 41.86 |
| Zm00001d023838_P014 | Maize | mitochondrion, nucleus | 46.49 | 41.09 |
| Solyc06g082840.2.1 | Tomato | nucleus | 49.5 | 41.02 |
| PGSC0003DMT400071173 | Potato | nucleus | 49.0 | 40.99 |
| GSMUA_Achr3P15350_001 | Banana | nucleus | 18.05 | 40.91 |
| KRH59609 | Soybean | nucleus | 49.0 | 39.78 |
| Os11t0661200-01 | Rice | nucleus | 43.36 | 38.96 |
| EES08933 | Sorghum | nucleus, plastid | 42.73 | 37.51 |
| PGSC0003DMT400052311 | Potato | nucleus | 39.47 | 37.32 |
| TraesCS4D01G145200.4 | Wheat | nucleus | 40.85 | 37.0 |
| Zm00001d007692_P003 | Maize | plasma membrane | 40.48 | 36.41 |
| HORVU4Hr1G033280.4 | Barley | nucleus | 41.23 | 35.34 |
| TraesCS4A01G169200.1 | Wheat | nucleus | 40.98 | 34.64 |
| TraesCS4B01G126200.1 | Wheat | nucleus | 39.72 | 33.94 |
| GSMUA_Achr7P25560_001 | Banana | nucleus | 26.94 | 16.32 |
| GSMUA_Achr7P25970_001 | Banana | nucleus | 13.28 | 15.34 |
| GSMUA_Achr1P13920_001 | Banana | nucleus | 25.81 | 14.45 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P24020_001 | EnsemblPlants:GSMUA_Achr3T24020_001 | EnsemblPlantsGene:GSMUA_Achr3G24020_001 | Gene3D:1.10.287.110 | InterPro:IPR036869 | InterPro:J_dom_sf |
| ncoils:Coil | PANTHER:PTHR23172 | PANTHER:PTHR23172:SF54 | SEG:seg | SUPFAM:SSF46565 | UniParc:UPI0002947F6F |
| UniProt:M0SHB8 | MapMan:22.1.6.4 | : | : | : | : |
Description
Putative Auxilin-related protein 2 [Source:GMGC_GENE;Acc:GSMUA_Achr3G24020_001]
Coordinates
chr3:+:24694851..24701279
Molecular Weight (calculated)
87778.6 Da
IEP (calculated)
6.845
GRAVY (calculated)
-0.882
Length
798 amino acids
Sequence
(BLAST)
(BLAST)
001: MDELPGILAR DFGFRPQGKS APMAASKAAS AGGVNLDAGM NRSSEASSRS PPGHDDIFGG PPSYSNKSSD RRSVEGLSHY KSKSSSSLPV YDKPVHDDDA
101: IFDGVPGLKS TSAKYDDIFS SVLPASKHDS TPPYDDLLEN LGKPMPAPKN ANEERSGEKE HDLSGFDELI PGFGGSSPPK KRYNFEVNQQ KPSVSSAKPA
201: SIVTEDPFVV LETESTSTSS SGFILDPLEN ISMPLNSENM KVGASSVSGG SSVEIDSFGG LSKSMPASMA DINESQKNKG YTHDAHNMSP GHHFSGGQAQ
301: QASADAHESI LPKMHPPKSS DSQKFAADDV WLTVDEIPLF TQPSGASPPS RPPPPFDTKK ATSADNGKRE KESLSQPTQS YTYTKDKARK PVVSPIDELE
401: DFAMGKPQTH SQDHADIFTR ENNIEANSDA AASAAAMKEA VDRAEVKFRH ARGLRERERN PKSTKSRVPV WHERVQKAKI CEHDVEDKEN QERIYKEQQQ
501: KEWRRIEKER KKEQARQAAE RATREVQERS AAEGRLKAEK AAAGIHERAA AEARERAAAE ARDKAAGEKQ QKPENDLESF FSMGTQASSS PKQRATVESM
601: FDVQSQSKGG YDGTRTSSSF SSTIRKASST TNIVDDLSSI FGAPQSSGEF QEAGESEERR KARLERHQRT LERAAKALAE KNERDMQIQR EQAERQRIAE
701: ALDFDIKRWA SGKEGNLRAL LSTLQYVVWP ECSWQPVSLT DLITAAAVKK VYRKATLCLH PDKVQQKGAN LQQKYIAEKV FDLLKEAWNK FSSAELFL
101: IFDGVPGLKS TSAKYDDIFS SVLPASKHDS TPPYDDLLEN LGKPMPAPKN ANEERSGEKE HDLSGFDELI PGFGGSSPPK KRYNFEVNQQ KPSVSSAKPA
201: SIVTEDPFVV LETESTSTSS SGFILDPLEN ISMPLNSENM KVGASSVSGG SSVEIDSFGG LSKSMPASMA DINESQKNKG YTHDAHNMSP GHHFSGGQAQ
301: QASADAHESI LPKMHPPKSS DSQKFAADDV WLTVDEIPLF TQPSGASPPS RPPPPFDTKK ATSADNGKRE KESLSQPTQS YTYTKDKARK PVVSPIDELE
401: DFAMGKPQTH SQDHADIFTR ENNIEANSDA AASAAAMKEA VDRAEVKFRH ARGLRERERN PKSTKSRVPV WHERVQKAKI CEHDVEDKEN QERIYKEQQQ
501: KEWRRIEKER KKEQARQAAE RATREVQERS AAEGRLKAEK AAAGIHERAA AEARERAAAE ARDKAAGEKQ QKPENDLESF FSMGTQASSS PKQRATVESM
601: FDVQSQSKGG YDGTRTSSSF SSTIRKASST TNIVDDLSSI FGAPQSSGEF QEAGESEERR KARLERHQRT LERAAKALAE KNERDMQIQR EQAERQRIAE
701: ALDFDIKRWA SGKEGNLRAL LSTLQYVVWP ECSWQPVSLT DLITAAAVKK VYRKATLCLH PDKVQQKGAN LQQKYIAEKV FDLLKEAWNK FSSAELFL
001: MDDFTGLLAR DFGLKPQGKS APMASQSNSS AADFNTFASS YSFASAAGKK SDSLPVFDDL GRDGDDLLFR DVFSGPPPKY GSSGDSRSPS APAFDYDVMF
101: KEPKSKSASS MPVYDKPVYD DEDVFESIPE LKIPSTSSQS ARFENVFSSI SSSPTKHRKQ NSSPFDDLMG NNLGKKESDR EEKGSSIFDD LIPGFGRTSS
201: PPAKRTTSET TSQSQKPPYR TAETSSNVKE DPFVVLEEST STLREPSTGG FTDPLEEIGK FNSRKTDHSS VHGGVFVDTD PLDSLGKSGP DMNSRGKSHL
301: RPPGNISGSQ SPVESSGLYH SKNVSFDDVV EPQNTSTPPP TNSDGSFESS DDVWLTVSEI PLFTQPTSAP PPTRPPPPRP TRPIKKKVNE PSIPTSAYHS
401: HVPSSGRASV NSPTASQMDE LDDFSIGRNQ TAANGYPDPS SGEDSDVFST AAASAAAMKD AMDKAEAKFR HAKERREKES LKASRSREGD HTENYDSRER
501: ELREKQVRLD RERAEREAEM EKTQAREREE REREQKRIER ERERLLARQA VERATREARE RAATEAHAKV QRAAVGKVTD ARERAERAAV QRAHAEARER
601: AAAGAREKAE KAAAEARERA NAEVREKEAK VRAERAAVER AAAEARGRAA AQAKAKQQQE NNNDLDSFFN SVSRPSSVPR QRTNPPDPFQ DSWNKGGSFE
701: SSRPSSRVPS GPTENLRKAS SATNIVDDLS SIFGAPASQS GGFQDVDGET EERRRARLER HQRTQERAAK ALAEKNERDL QVQREQAEKD RIGGTLDVEI
801: RRWGAGKEGN LRALLSTLQY VLWPECGWQP VSLTDLITGA SVKKVYRKAT LCIHPDKVQQ KGANLQQKYI AEKVFDMLKE AWNKFNSEEL F
101: KEPKSKSASS MPVYDKPVYD DEDVFESIPE LKIPSTSSQS ARFENVFSSI SSSPTKHRKQ NSSPFDDLMG NNLGKKESDR EEKGSSIFDD LIPGFGRTSS
201: PPAKRTTSET TSQSQKPPYR TAETSSNVKE DPFVVLEEST STLREPSTGG FTDPLEEIGK FNSRKTDHSS VHGGVFVDTD PLDSLGKSGP DMNSRGKSHL
301: RPPGNISGSQ SPVESSGLYH SKNVSFDDVV EPQNTSTPPP TNSDGSFESS DDVWLTVSEI PLFTQPTSAP PPTRPPPPRP TRPIKKKVNE PSIPTSAYHS
401: HVPSSGRASV NSPTASQMDE LDDFSIGRNQ TAANGYPDPS SGEDSDVFST AAASAAAMKD AMDKAEAKFR HAKERREKES LKASRSREGD HTENYDSRER
501: ELREKQVRLD RERAEREAEM EKTQAREREE REREQKRIER ERERLLARQA VERATREARE RAATEAHAKV QRAAVGKVTD ARERAERAAV QRAHAEARER
601: AAAGAREKAE KAAAEARERA NAEVREKEAK VRAERAAVER AAAEARGRAA AQAKAKQQQE NNNDLDSFFN SVSRPSSVPR QRTNPPDPFQ DSWNKGGSFE
701: SSRPSSRVPS GPTENLRKAS SATNIVDDLS SIFGAPASQS GGFQDVDGET EERRRARLER HQRTQERAAK ALAEKNERDL QVQREQAEKD RIGGTLDVEI
801: RRWGAGKEGN LRALLSTLQY VLWPECGWQP VSLTDLITGA SVKKVYRKAT LCIHPDKVQQ KGANLQQKYI AEKVFDMLKE AWNKFNSEEL F
Arabidopsis Description
Auxilin-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WQ57]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.