Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400071173 | Potato | nucleus | 94.7 | 95.6 |
| Solyc09g018960.2.1 | Tomato | nucleus | 64.38 | 67.32 |
| VIT_00s0188g00210.t01 | Wine grape | plastid | 10.49 | 62.35 |
| GSMUA_Achr2P02260_001 | Banana | nucleus | 16.93 | 58.84 |
| VIT_07s0031g02350.t01 | Wine grape | nucleus, plastid | 55.35 | 55.64 |
| KRH53945 | Soybean | nucleus, plastid | 52.96 | 55.31 |
| KRH40961 | Soybean | endoplasmic reticulum | 53.48 | 55.14 |
| KRH63993 | Soybean | nucleus, plastid | 51.4 | 54.28 |
| CDY31429 | Canola | plastid | 45.9 | 54.17 |
| CDX76445 | Canola | nucleus | 46.21 | 53.36 |
| AT4G12770.1 | Thale cress | nucleus | 49.33 | 53.31 |
| Bra020913.1-P | Field mustard | nucleus | 45.9 | 52.87 |
| KRH59609 | Soybean | nucleus | 53.27 | 52.19 |
| HORVU5Hr1G024350.1 | Barley | plasma membrane | 39.98 | 52.17 |
| AT4G12780.1 | Thale cress | nucleus | 48.49 | 51.66 |
| GSMUA_Achr11P... | Banana | nucleus | 49.43 | 51.29 |
| TraesCS5A01G092500.2 | Wheat | nucleus | 46.31 | 50.0 |
| TraesCS5D01G104700.2 | Wheat | nucleus | 46.11 | 49.94 |
| Os12t0548200-02 | Rice | plasma membrane | 47.66 | 49.62 |
| EES17168 | Sorghum | mitochondrion, nucleus | 46.21 | 49.61 |
| GSMUA_Achr3P24020_001 | Banana | nucleus | 41.02 | 49.5 |
| TraesCS5B01G098600.2 | Wheat | nucleus | 45.38 | 48.99 |
| Zm00001d041647_P004 | Maize | nucleus | 44.65 | 48.64 |
| GSMUA_Achr1P26650_001 | Banana | nucleus | 43.72 | 47.95 |
| Zm00001d023838_P014 | Maize | mitochondrion, nucleus | 43.93 | 46.84 |
| Os11t0661200-01 | Rice | nucleus | 41.23 | 44.71 |
| EES08933 | Sorghum | nucleus, plastid | 41.02 | 43.45 |
| Zm00001d007692_P003 | Maize | plasma membrane | 39.77 | 43.18 |
| Solyc06g060090.2.1 | Tomato | nucleus | 21.08 | 41.68 |
| TraesCS4D01G145200.4 | Wheat | nucleus | 38.11 | 41.66 |
| HORVU4Hr1G033280.4 | Barley | nucleus | 38.21 | 39.53 |
| TraesCS4A01G169200.1 | Wheat | nucleus | 38.01 | 38.77 |
| TraesCS4B01G126200.1 | Wheat | nucleus | 37.18 | 38.33 |
| Solyc02g085030.2.1 | Tomato | nucleus | 26.48 | 18.15 |
| Solyc04g080040.2.1 | Tomato | nucleus | 12.56 | 16.71 |
| Solyc04g080600.2.1 | Tomato | nucleus | 25.03 | 15.95 |
Protein Annotations
| EnsemblPlants:Solyc06g082840.2.1 | EnsemblPlantsGene:Solyc06g082840.2 | Gene3D:1.10.287.110 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006898 |
| GO:GO:0008150 | GO:GO:0031982 | InterPro:IPR036869 | InterPro:J_dom_sf | ncoils:Coil | PANTHER:PTHR23172 |
| PANTHER:PTHR23172:SF54 | SEG:seg | SUPFAM:SSF46565 | UniParc:UPI00027659DC | UniProt:K4CAD9 | MapMan:22.1.6.4 |
Description
No Description!
Coordinates
chr6:-:48498999..48505603
Molecular Weight (calculated)
105739.0 Da
IEP (calculated)
7.442
GRAVY (calculated)
-1.014
Length
963 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDLDMLTRD YGFRPGGKSA PMRSDGGDRR SSSVRSSSSS PLYDDPDGLL YKDVFGGPPK YTKSSNNNSK SSSMNDINYD SIFNTGNDSN SYNNSKTSSV
101: PVYDKPVYDE DIFDGLPGLK SKSESESAST LRFDDNVFAT MTSPPQPKMK DEHFGDLLWN LKSNEKVTGP KSSTSSSAKE FDDLLAGFGS STSTSNMRSF
201: TESSHYSKPT GNSNQSTIAL DDPFAGLGPT SMSPLSNSGE FMDPLEQIGQ LGKSGNAHSE ASSVSGGVLD DLDPLNGFSK SVPPLYSART NRGTGGSPQR
301: VGSGRSDTQA SSSRENIGKS SSRSSDSRSQ KKVPADGFQD SPLFDIPSAD PQRSFGPAGS PPSYPSGNIH ETHFGSDTSP RSEDQMLPSD DVWLSVSEIP
401: LFTQPTRAPP PSRPPPPIPR RNFKSESSSF ASNARKKGDR HSSSPSYNQY SQSPKVVRPA AKSPPTSQLD ELDEFAMGKS PHSVDGSAEV SGEDMNANSV
501: AAASAAAMKE AMDRAQAKFR HAKEVRERES AKAAKSKEAV NLDRDEQAMH ETQEKELKEN KERLERERQQ REKEEEERAQ WKLERERERA RELERDRGRQ
601: AVERATREAR ERAAAEARER AAAAARLKTE RAAVEKAGAE ARERAERAAV QRAQAEARER AAAEAKERAE KVAAEAREKE AREKASAAKA EAEVRRRAER
701: AAVERAAAEA RERAAADARE RAAAAARMNQ QKNDDDLESF FNMGSRANST PKTRTSSVNE TSFASQFQNK AGAGGPKPTF SSTTTSSNRT KASSTTSFAD
801: DLSSIFGAAT SSGDFQEVEG ETEERRRARL ERHQRTQERA AKALAEKNQR DLQVQMEQQE RHRISESLDI EIKRWAAGKE GNLRALLSTM QYVLWPECGW
901: QPVSLTDLIT GASVKKVYRK ATLCIHPDKV QQKGATLQQK YVAEKVFDML KEAWNKFNSE ELF
101: PVYDKPVYDE DIFDGLPGLK SKSESESAST LRFDDNVFAT MTSPPQPKMK DEHFGDLLWN LKSNEKVTGP KSSTSSSAKE FDDLLAGFGS STSTSNMRSF
201: TESSHYSKPT GNSNQSTIAL DDPFAGLGPT SMSPLSNSGE FMDPLEQIGQ LGKSGNAHSE ASSVSGGVLD DLDPLNGFSK SVPPLYSART NRGTGGSPQR
301: VGSGRSDTQA SSSRENIGKS SSRSSDSRSQ KKVPADGFQD SPLFDIPSAD PQRSFGPAGS PPSYPSGNIH ETHFGSDTSP RSEDQMLPSD DVWLSVSEIP
401: LFTQPTRAPP PSRPPPPIPR RNFKSESSSF ASNARKKGDR HSSSPSYNQY SQSPKVVRPA AKSPPTSQLD ELDEFAMGKS PHSVDGSAEV SGEDMNANSV
501: AAASAAAMKE AMDRAQAKFR HAKEVRERES AKAAKSKEAV NLDRDEQAMH ETQEKELKEN KERLERERQQ REKEEEERAQ WKLERERERA RELERDRGRQ
601: AVERATREAR ERAAAEARER AAAAARLKTE RAAVEKAGAE ARERAERAAV QRAQAEARER AAAEAKERAE KVAAEAREKE AREKASAAKA EAEVRRRAER
701: AAVERAAAEA RERAAADARE RAAAAARMNQ QKNDDDLESF FNMGSRANST PKTRTSSVNE TSFASQFQNK AGAGGPKPTF SSTTTSSNRT KASSTTSFAD
801: DLSSIFGAAT SSGDFQEVEG ETEERRRARL ERHQRTQERA AKALAEKNQR DLQVQMEQQE RHRISESLDI EIKRWAAGKE GNLRALLSTM QYVLWPECGW
901: QPVSLTDLIT GASVKKVYRK ATLCIHPDKV QQKGATLQQK YVAEKVFDML KEAWNKFNSE ELF
001: MDDFTGLLAR DFGLKPQGKS APMASQSNSS AADFNTFASS YSFATAAGKK SDSLPVFDDP GRDGDDLLFK DVFSGPPPPK YGSSSGDSRS PSAPAFDYDA
101: MFKEPKSKSA SSMPVYDKPV YDDEDVFESI PELKIPSTSS QSARFENVFS SISSSPTKHR KQNSSPFDDL MGNNLGKKGA DSDREEKGSS IFDDLIPGFG
201: RTSSPPSKRT TSETTNQSEK APYRTAETSS NVEEDPFVVL EESESTPREP SRTDPLDDIG KFNSRKTDHS SVHGGVFVDI DPLDNLGKPG PDMNSKGKSH
301: LRPPGNISGS QSPPVESPGS YHSKKVSFED FLEPHNMSTP PPTNSNGSFE SSDDVWLTVS EIPLFTQPTS APPPTRPPPP RPTRPIKKKV NEPSIPTSAY
401: HSHVPSSGRA SVNSPTASQM DELDDFSIGR NQTAANGYPD PSSGEDSDVF STAAASAAAM KDAMDKAEAK FRHAKERREK ENLKASRSRE GDHTENYDSR
501: ERELREKQVR LDRERAEREA EMEKAQEREK EEREREQKRI ERERERLVAR QAVERATREA RERAATEAHA KVQRAAVGKA TDARERAERA AVQRAHAEAR
601: ERAAAGARDK AAKAAAEARE KAEKAAAEAK ERANAEAREK ETRVRAERAA VERAAAEARG RAAAQAKAKQ QQENTNDLDS FFSSISRPNS APRQRTNPLD
701: PFQDSWNKGG SFESSRESLR VPPGQPENLR KTSSVTNIVD DLSSIFGASA SQSGGFQDVD GETEERRRAR LERHQRTQER AAKALAEKNE RDLQVQREQV
801: EKDRIGVTLD VEIKRWGAGK EGNLRALLST LQYVLWPECG WQPVSLTDLI TAASVKKVYR KATLCIHPDK VQQKGANLQQ KYIAEKVFDM LKEAWNKFNS
901: EELF
101: MFKEPKSKSA SSMPVYDKPV YDDEDVFESI PELKIPSTSS QSARFENVFS SISSSPTKHR KQNSSPFDDL MGNNLGKKGA DSDREEKGSS IFDDLIPGFG
201: RTSSPPSKRT TSETTNQSEK APYRTAETSS NVEEDPFVVL EESESTPREP SRTDPLDDIG KFNSRKTDHS SVHGGVFVDI DPLDNLGKPG PDMNSKGKSH
301: LRPPGNISGS QSPPVESPGS YHSKKVSFED FLEPHNMSTP PPTNSNGSFE SSDDVWLTVS EIPLFTQPTS APPPTRPPPP RPTRPIKKKV NEPSIPTSAY
401: HSHVPSSGRA SVNSPTASQM DELDDFSIGR NQTAANGYPD PSSGEDSDVF STAAASAAAM KDAMDKAEAK FRHAKERREK ENLKASRSRE GDHTENYDSR
501: ERELREKQVR LDRERAEREA EMEKAQEREK EEREREQKRI ERERERLVAR QAVERATREA RERAATEAHA KVQRAAVGKA TDARERAERA AVQRAHAEAR
601: ERAAAGARDK AAKAAAEARE KAEKAAAEAK ERANAEAREK ETRVRAERAA VERAAAEARG RAAAQAKAKQ QQENTNDLDS FFSSISRPNS APRQRTNPLD
701: PFQDSWNKGG SFESSRESLR VPPGQPENLR KTSSVTNIVD DLSSIFGASA SQSGGFQDVD GETEERRRAR LERHQRTQER AAKALAEKNE RDLQVQREQV
801: EKDRIGVTLD VEIKRWGAGK EGNLRALLST LQYVLWPECG WQPVSLTDLI TAASVKKVYR KATLCIHPDK VQQKGANLQQ KYIAEKVFDM LKEAWNKFNS
901: EELF
Arabidopsis Description
AUXI1Auxilin-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU08]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.