Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
23508561
plasma membrane: 27341663 |
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400052312 | Potato | cytosol | 10.26 | 87.5 |
| EES08933 | Sorghum | nucleus, plastid | 88.73 | 86.58 |
| VIT_00s0188g00150.t01 | Wine grape | cytosol | 4.4 | 84.78 |
| VIT_10s0116g01370.t01 | Wine grape | extracellular | 6.88 | 72.62 |
| Os11t0661200-01 | Rice | nucleus | 69.33 | 69.26 |
| TraesCS4D01G145200.4 | Wheat | nucleus | 67.08 | 67.54 |
| TraesCS4A01G169200.1 | Wheat | nucleus | 66.74 | 62.71 |
| TraesCS4B01G126200.1 | Wheat | nucleus | 65.73 | 62.42 |
| HORVU4Hr1G033280.4 | Barley | nucleus | 65.5 | 62.41 |
| Zm00001d041647_P004 | Maize | nucleus | 53.66 | 53.85 |
| Zm00001d023838_P014 | Maize | mitochondrion, nucleus | 53.1 | 52.16 |
| VIT_00s0188g00210.t01 | Wine grape | plastid | 8.79 | 48.15 |
| GSMUA_Achr11P... | Banana | nucleus | 47.46 | 45.37 |
| KRH63993 | Soybean | nucleus, plastid | 44.53 | 43.31 |
| KRH53945 | Soybean | nucleus, plastid | 44.87 | 43.17 |
| CDY31429 | Canola | plastid | 39.68 | 43.14 |
| CDX76445 | Canola | nucleus | 40.02 | 42.57 |
| Bra020913.1-P | Field mustard | nucleus | 39.91 | 42.34 |
| KRH40961 | Soybean | endoplasmic reticulum | 44.42 | 42.18 |
| Solyc09g018960.2.1 | Tomato | nucleus | 42.5 | 40.93 |
| VIT_07s0031g02350.t01 | Wine grape | nucleus, plastid | 43.97 | 40.71 |
| GSMUA_Achr3P24020_001 | Banana | nucleus | 36.41 | 40.48 |
| AT4G12770.1 | Thale cress | nucleus | 40.47 | 40.29 |
| PGSC0003DMT400071173 | Potato | nucleus | 43.29 | 40.25 |
| Solyc06g082840.2.1 | Tomato | nucleus | 43.18 | 39.77 |
| KRH59609 | Soybean | nucleus | 43.74 | 39.47 |
| AT4G12780.1 | Thale cress | nucleus | 40.14 | 39.38 |
| PGSC0003DMT400052311 | Potato | nucleus | 33.6 | 35.31 |
| Zm00001d040795_P002 | Maize | cytosol | 33.03 | 31.88 |
| Zm00001d048175_P002 | Maize | nucleus | 10.94 | 16.28 |
| Zm00001d039120_P002 | Maize | nucleus | 24.69 | 14.41 |
| Zm00001d044121_P002 | Maize | nucleus | 21.42 | 12.01 |
Protein Annotations
| EnsemblPlants:Zm00001d007692_P003 | EnsemblPlants:Zm00001d007692_T003 | EnsemblPlantsGene:Zm00001d007692 | Gene3D:1.10.287.110 | InterPro:IPR036869 | InterPro:J_dom_sf |
| ncoils:Coil | PANTHER:PTHR23172 | PANTHER:PTHR23172:SF50 | ProteinID:ONM27342.1 | SEG:seg | SUPFAM:SSF46565 |
| UniParc:UPI000843CAE4 | UniProt:A0A1D6F7Z5 | MapMan:22.1.6.4 | : | : | : |
Description
Auxilin-related protein 1
Coordinates
chr2:+:237526488..237532447
Molecular Weight (calculated)
96391.5 Da
IEP (calculated)
5.413
GRAVY (calculated)
-0.886
Length
887 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGIEGLLAR DFGVRPQGKA APMAGASRST GSSAGADAWA SYGRSTPAPS AAPSYDDLFG ASLFDSFKGP TTTTTTNPAA PSPAPAYDDD IFDAVPGLRP
101: SSSASTTASS APRYDDGVFG SSAAPAYDDV FATSARSAPP PPAYDDDILG GFGSALPQAQ AEERRRPVAV DDDDLLGAFG RSPSEGKRKP APAQADRVGS
201: TGFDDLIPGF AGSSPPRSRK SNDDNKMKPP VPTSKQRASM ADGPFVVLET ASAYTSPGRS TDPVEDLDKT ASFDGKAANS TADDDSLFEQ SSAFDQAPKS
301: DPLFTSEFNG HAKDTKPPSA VRDSSPLHHS MDRNPARQSS MEDFDNVMPK SQSARYSDVR GNDTEDQSPR STESEDDIWL TVSEIPLFTA PTIAPPPSRS
401: PPLLKRKPLR ANAKENGHAR QSTPNQNHYT DLPKQPEVSS IDDLEGFSMG KPQMPAYGNT VFDEDYERSS SDTEEKDRQE RLEKEREMKL REEMEREQRR
501: LEKERELEQQ RERERERQAV ERATKEARER ASAEARAKAE REARQRSQRA AVQRAQQEAR ERAAVEAKER AARVAAEARE RAAAEAKERA AAEAKEKAAA
601: EAKERERAAA RERAAAERAA AERAQQEARK RAERAAVERA ATEARERQAA AAAAAATAAA AAAAREKQST ADDLESFFGV GSRANSAPKQ RAPTPTVDSM
701: FGFGAQGRGT TNGSQRAAST SAPVRKVASA TSFGDDLSDL FGAPASSDVF QEVEGESEER RRARLERHQR TRERAPTCLF GHSEIQRIGD TLDFEIKRWS
801: AGKEGNLRAL LSTLQYILWP ECGWQAVSLT DLITGAAVKK QYRKATLCIH PDKVQQKGAT LQQKYIAEKV FDILKEAWNK FNSEELF
101: SSSASTTASS APRYDDGVFG SSAAPAYDDV FATSARSAPP PPAYDDDILG GFGSALPQAQ AEERRRPVAV DDDDLLGAFG RSPSEGKRKP APAQADRVGS
201: TGFDDLIPGF AGSSPPRSRK SNDDNKMKPP VPTSKQRASM ADGPFVVLET ASAYTSPGRS TDPVEDLDKT ASFDGKAANS TADDDSLFEQ SSAFDQAPKS
301: DPLFTSEFNG HAKDTKPPSA VRDSSPLHHS MDRNPARQSS MEDFDNVMPK SQSARYSDVR GNDTEDQSPR STESEDDIWL TVSEIPLFTA PTIAPPPSRS
401: PPLLKRKPLR ANAKENGHAR QSTPNQNHYT DLPKQPEVSS IDDLEGFSMG KPQMPAYGNT VFDEDYERSS SDTEEKDRQE RLEKEREMKL REEMEREQRR
501: LEKERELEQQ RERERERQAV ERATKEARER ASAEARAKAE REARQRSQRA AVQRAQQEAR ERAAVEAKER AARVAAEARE RAAAEAKERA AAEAKEKAAA
601: EAKERERAAA RERAAAERAA AERAQQEARK RAERAAVERA ATEARERQAA AAAAAATAAA AAAAREKQST ADDLESFFGV GSRANSAPKQ RAPTPTVDSM
701: FGFGAQGRGT TNGSQRAAST SAPVRKVASA TSFGDDLSDL FGAPASSDVF QEVEGESEER RRARLERHQR TRERAPTCLF GHSEIQRIGD TLDFEIKRWS
801: AGKEGNLRAL LSTLQYILWP ECGWQAVSLT DLITGAAVKK QYRKATLCIH PDKVQQKGAT LQQKYIAEKV FDILKEAWNK FNSEELF
001: MDDFTGLLAR DFGLKPQGKS APMASQSNSS AADFNTFASS YSFASAAGKK SDSLPVFDDL GRDGDDLLFR DVFSGPPPKY GSSGDSRSPS APAFDYDVMF
101: KEPKSKSASS MPVYDKPVYD DEDVFESIPE LKIPSTSSQS ARFENVFSSI SSSPTKHRKQ NSSPFDDLMG NNLGKKESDR EEKGSSIFDD LIPGFGRTSS
201: PPAKRTTSET TSQSQKPPYR TAETSSNVKE DPFVVLEEST STLREPSTGG FTDPLEEIGK FNSRKTDHSS VHGGVFVDTD PLDSLGKSGP DMNSRGKSHL
301: RPPGNISGSQ SPVESSGLYH SKNVSFDDVV EPQNTSTPPP TNSDGSFESS DDVWLTVSEI PLFTQPTSAP PPTRPPPPRP TRPIKKKVNE PSIPTSAYHS
401: HVPSSGRASV NSPTASQMDE LDDFSIGRNQ TAANGYPDPS SGEDSDVFST AAASAAAMKD AMDKAEAKFR HAKERREKES LKASRSREGD HTENYDSRER
501: ELREKQVRLD RERAEREAEM EKTQAREREE REREQKRIER ERERLLARQA VERATREARE RAATEAHAKV QRAAVGKVTD ARERAERAAV QRAHAEARER
601: AAAGAREKAE KAAAEARERA NAEVREKEAK VRAERAAVER AAAEARGRAA AQAKAKQQQE NNNDLDSFFN SVSRPSSVPR QRTNPPDPFQ DSWNKGGSFE
701: SSRPSSRVPS GPTENLRKAS SATNIVDDLS SIFGAPASQS GGFQDVDGET EERRRARLER HQRTQERAAK ALAEKNERDL QVQREQAEKD RIGGTLDVEI
801: RRWGAGKEGN LRALLSTLQY VLWPECGWQP VSLTDLITGA SVKKVYRKAT LCIHPDKVQQ KGANLQQKYI AEKVFDMLKE AWNKFNSEEL F
101: KEPKSKSASS MPVYDKPVYD DEDVFESIPE LKIPSTSSQS ARFENVFSSI SSSPTKHRKQ NSSPFDDLMG NNLGKKESDR EEKGSSIFDD LIPGFGRTSS
201: PPAKRTTSET TSQSQKPPYR TAETSSNVKE DPFVVLEEST STLREPSTGG FTDPLEEIGK FNSRKTDHSS VHGGVFVDTD PLDSLGKSGP DMNSRGKSHL
301: RPPGNISGSQ SPVESSGLYH SKNVSFDDVV EPQNTSTPPP TNSDGSFESS DDVWLTVSEI PLFTQPTSAP PPTRPPPPRP TRPIKKKVNE PSIPTSAYHS
401: HVPSSGRASV NSPTASQMDE LDDFSIGRNQ TAANGYPDPS SGEDSDVFST AAASAAAMKD AMDKAEAKFR HAKERREKES LKASRSREGD HTENYDSRER
501: ELREKQVRLD RERAEREAEM EKTQAREREE REREQKRIER ERERLLARQA VERATREARE RAATEAHAKV QRAAVGKVTD ARERAERAAV QRAHAEARER
601: AAAGAREKAE KAAAEARERA NAEVREKEAK VRAERAAVER AAAEARGRAA AQAKAKQQQE NNNDLDSFFN SVSRPSSVPR QRTNPPDPFQ DSWNKGGSFE
701: SSRPSSRVPS GPTENLRKAS SATNIVDDLS SIFGAPASQS GGFQDVDGET EERRRARLER HQRTQERAAK ALAEKNERDL QVQREQAEKD RIGGTLDVEI
801: RRWGAGKEGN LRALLSTLQY VLWPECGWQP VSLTDLITGA SVKKVYRKAT LCIHPDKVQQ KGANLQQKYI AEKVFDMLKE AWNKFNSEEL F
Arabidopsis Description
Auxilin-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WQ57]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.