Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- nucleus 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G041000.2 | Wheat | nucleus, plastid | 95.8 | 97.01 |
| TraesCS4B01G261900.1 | Wheat | nucleus, plastid | 96.11 | 96.87 |
| HORVU4Hr1G070720.5 | Barley | mitochondrion | 93.93 | 88.95 |
| Os03t0198300-02 | Rice | nucleus | 65.63 | 69.52 |
| EER95331 | Sorghum | nucleus, plastid | 60.34 | 65.87 |
| Zm00001d048175_P002 | Maize | nucleus | 59.72 | 64.43 |
| GSMUA_Achr7P25970_001 | Banana | nucleus | 38.72 | 36.03 |
| KRH61195 | Soybean | nucleus | 26.91 | 27.33 |
| CDX73142 | Canola | nucleus | 23.95 | 26.01 |
| CDY45410 | Canola | nucleus | 23.79 | 25.76 |
| Bra015866.1-P | Field mustard | nucleus | 24.73 | 24.92 |
| VIT_18s0001g12100.t01 | Wine grape | nucleus | 29.55 | 24.8 |
| PGSC0003DMT400071608 | Potato | nucleus | 26.28 | 24.21 |
| KRH51877 | Soybean | nucleus | 26.91 | 24.03 |
| AT1G75100.1 | Thale cress | nucleus | 23.79 | 23.5 |
| Solyc04g080040.2.1 | Tomato | nucleus | 25.97 | 23.07 |
| PGSC0003DMT400071606 | Potato | nucleus | 14.77 | 16.87 |
| CDY59467 | Canola | mitochondrion | 22.08 | 14.36 |
| TraesCS5D01G104700.2 | Wheat | nucleus | 17.42 | 12.6 |
| TraesCS4D01G145200.4 | Wheat | nucleus | 16.33 | 11.92 |
| TraesCS3D01G224500.1 | Wheat | nucleus | 17.73 | 7.5 |
| TraesCS1D01G427300.1 | Wheat | nucleus | 17.11 | 7.12 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G261900.1 | EnsemblPlantsGene:TraesCS4D01G261900 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:IPR001623 | InterPro:IPR036869 |
| InterPro:J_dom_sf | PANTHER:PTHR23172 | PANTHER:PTHR23172:SF55 | SEG:seg | SUPFAM:SSF46565 | TIGR:cd06257 |
| MapMan:20.5.7 | MapMan:22.1.6.4 | : | : | : | : |
Description
No Description!
Coordinates
chr4D:-:432931785..432937476
Molecular Weight (calculated)
70471.1 Da
IEP (calculated)
6.700
GRAVY (calculated)
-0.889
Length
643 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGAPRRSDV DFADVFGGPP RRSSGSDRGR RSSLDSPSGS GSGPASRERS GAEERPVFGD RTSSGFASRE RRSGGESGPG ERPVFGDRTS SERRQLGQEF
101: YKDIFPGAEP PASPRPGGAS GDRDVFGAPT SPGGSTSRLL SRSSFSMKFT RGVDSSVPTS PSRHISNRND DDTSYGYSVP ASPNSSTNSS LAQGVSQQDS
201: KRNPFSWHRY PFLSRFRSSG DKKDSSQHVN SMDSECEGTP ISSASFISSD KFHFSFYKWA GKGALLMLPA SVQEKDGNII GVRSFPQVVV QGIDLIDEEE
301: SMSTATPASK SQTDYEDYKS GKDGLFERKH SINSTTREES SVFDDYLQGD KSKEAGTKKS INNAKNNVSA GSPRTQSSRP PSDEKSRGSR VLKDFIKIFS
401: PEVSPKRKAA VEAQDQSSGK NGSKGGVEDK FSISDLETGE DIKTDKTNNQ NAFSPAAAQI RDVQGRMEKP VLTVDDEILT RTGKLSGTED VKPPSADKSF
501: HVETEEKVRD TTSREESHME NLEECVVEHL DEDQILQDDN EKEQIKISQS KIREWSKGKE GNIRSLLSTL QYVLWPESGW KPVPLVNIIE GAAVKKAYQK
601: ALLCLHPDKL QQRGAAMHQK YIAEKVFEIL QEAWKEFNSV TFG
101: YKDIFPGAEP PASPRPGGAS GDRDVFGAPT SPGGSTSRLL SRSSFSMKFT RGVDSSVPTS PSRHISNRND DDTSYGYSVP ASPNSSTNSS LAQGVSQQDS
201: KRNPFSWHRY PFLSRFRSSG DKKDSSQHVN SMDSECEGTP ISSASFISSD KFHFSFYKWA GKGALLMLPA SVQEKDGNII GVRSFPQVVV QGIDLIDEEE
301: SMSTATPASK SQTDYEDYKS GKDGLFERKH SINSTTREES SVFDDYLQGD KSKEAGTKKS INNAKNNVSA GSPRTQSSRP PSDEKSRGSR VLKDFIKIFS
401: PEVSPKRKAA VEAQDQSSGK NGSKGGVEDK FSISDLETGE DIKTDKTNNQ NAFSPAAAQI RDVQGRMEKP VLTVDDEILT RTGKLSGTED VKPPSADKSF
501: HVETEEKVRD TTSREESHME NLEECVVEHL DEDQILQDDN EKEQIKISQS KIREWSKGKE GNIRSLLSTL QYVLWPESGW KPVPLVNIIE GAAVKKAYQK
601: ALLCLHPDKL QQRGAAMHQK YIAEKVFEIL QEAWKEFNSV TFG
001: MQTLPSSETV LLGSNSAPPV LRSPGGDDVD IDFGDVFGGP PKRRSKVTSN EVTRHSFSES ALRRRDVIVD VGDLLPQDEK PVFGEDTSSV RRRFTTDDFF
101: DDIFRVNESS SLPGSRILSP AHKPESSSGT SSPSQFSLPA KATEIPTFNL AATRSLNKNK ETVSSSPLSR TSSKADVVST AKSYSDDCDD PPQVFVTGKG
201: RQFHFSIYKW PNKGVPVVIW GSSRLSSMSK AEETTPVPLS DYRKTSVVEK LGKNEEGDGK SGLSGLKDVK KTSLKRPGVQ TKEEKTETDL KSEQAFFGVS
301: KAREANVKPL DSVESEQAFS GVSKAHEATT VKPLHSIFHE EDERQDEKIV SEREVRKGKS KAKNTRSFTE DSRTKKKSQG TKSSLDSSPI PDKSSFASSS
401: AAPEVGKDGV KGKVSDFVKI FSKGASVGAG GESLGQSSRW RAKETPKTDI IHDGSNAKET VNIPDQQKKS TPDIPAMNRD QKPSQSTQKK DSDRESMNYK
501: APGDTVQEER QEPSTTHTTS EDIDEPFHVN FDVEDITQDE NKMEEANKDA EEIKNIDAKI RKWSSGKSGN IRSLLSTLQY ILWSGSGWKP VPLMDMIEGN
601: AVRKSYQRAL LILHPDKLQQ KGASANQKYM AEKVFELLQE AWDHFNTLGP V
101: DDIFRVNESS SLPGSRILSP AHKPESSSGT SSPSQFSLPA KATEIPTFNL AATRSLNKNK ETVSSSPLSR TSSKADVVST AKSYSDDCDD PPQVFVTGKG
201: RQFHFSIYKW PNKGVPVVIW GSSRLSSMSK AEETTPVPLS DYRKTSVVEK LGKNEEGDGK SGLSGLKDVK KTSLKRPGVQ TKEEKTETDL KSEQAFFGVS
301: KAREANVKPL DSVESEQAFS GVSKAHEATT VKPLHSIFHE EDERQDEKIV SEREVRKGKS KAKNTRSFTE DSRTKKKSQG TKSSLDSSPI PDKSSFASSS
401: AAPEVGKDGV KGKVSDFVKI FSKGASVGAG GESLGQSSRW RAKETPKTDI IHDGSNAKET VNIPDQQKKS TPDIPAMNRD QKPSQSTQKK DSDRESMNYK
501: APGDTVQEER QEPSTTHTTS EDIDEPFHVN FDVEDITQDE NKMEEANKDA EEIKNIDAKI RKWSSGKSGN IRSLLSTLQY ILWSGSGWKP VPLMDMIEGN
601: AVRKSYQRAL LILHPDKLQQ KGASANQKYM AEKVFELLQE AWDHFNTLGP V
Arabidopsis Description
JAC1JAC1 [Source:UniProtKB/TrEMBL;Acc:A0A178WHU1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.