CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, golgi

Predictor Summary:

extracellular 5
golgi 5
plasma membrane 4
endoplasmic reticulum 4
vacuole 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	plastid, secretory
BaCelLo:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400030755	Potato	nucleus	67.86	29.38
CDX88363	Canola	cytosol	60.71	21.34
Bra015674.1-P	Field mustard	cytosol	64.29	17.76
CDX87523	Canola	cytosol	64.29	17.65
KRH53284	Soybean	nucleus	89.29	14.53
KRH64620	Soybean	nucleus	89.29	14.51
CDY04660	Canola	cytosol	75.0	13.15
CDY01318	Canola	cytosol	77.38	12.65
Bra012290.1-P	Field mustard	cytosol	76.19	12.43
AT1G21660.1	Thale cress	nucleus	76.19	12.24
CDY00396	Canola	nucleus	76.19	12.21
Solyc06g060090.2.1	Tomato	nucleus	70.24	12.12
CDY08188	Canola	nucleus	65.48	11.29
Bra017937.1-P	Field mustard	nucleus	65.48	11.29
VIT_18s0001g01980.t01	Wine grape	cytosol	66.67	10.85
KRH12827	Soybean	nucleus	50.0	9.01
KRH37791	Soybean	nucleus	50.0	8.97
KRH58698	Soybean	nucleus	45.24	8.17
KRH44795	Soybean	nucleus	44.05	8.17
KRH42596	Soybean	nucleus	45.24	7.98
KRH61195	Soybean	nucleus	57.14	7.58
KRH63993	Soybean	nucleus, plastid	72.62	6.69
KRH40961	Soybean	endoplasmic reticulum	73.81	6.64
KRH53945	Soybean	nucleus, plastid	72.62	6.62
KRH51877	Soybean	nucleus	55.95	6.53
Os01t0355500-02	Rice	nucleus	72.62	6.43
KRH59609	Soybean	nucleus	73.81	6.31
OQU86832	Sorghum	nucleus	70.24	6.15
KRH69887	Soybean	nucleus	60.71	3.54
KRH28713	Soybean	nucleus	57.14	3.46
KRH75084	Soybean	nucleus	54.76	3.44
KRH76753	Soybean	nucleus	57.14	3.42
KRH70946	Soybean	nucleus	53.57	3.39
Zm00001d040795_P002	Maize	cytosol	15.48	1.41
KRH08235	Soybean	nucleus	3.57	0.37

Protein Annotations

EMBL:ACUP02012255	EnsemblPlants:KRG89681	EnsemblPlantsGene:GLYMA_20G040300	Gene3D:1.10.287.110	InterPro:IPR036869	InterPro:J_dom_sf
PANTHER:PTHR23172	ProteinID:KRG89681	ProteinID:KRG89681.1	SignalP:SignalP-noTM	SUPFAM:SSF46565	UniParc:UPI0006EE1381
UniProt:A0A0R0EH11	MapMan:22.1.6.4	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:+:6933047..6944518

Molecular Weight (calculated)

9768.9 Da

IEP (calculated)

8.197

GRAVY (calculated)

-0.124

Length

84 amino acids

Sequence
(BLAST)

1: MMDFSRVFYF LLVVLWPECG WQPVSLTDMI TSSAVKKVYR KANLCIHPDK VQQKGATLEQ KYTAEKVFDI LKEAYTKFNA EELS

Best Arabidopsis Sequence Match ( AT4G12780.1 )
(BLAST)

001: MDDFTGLLAR DFGLKPQGKS APMASQSNSS AADFNTFASS YSFATAAGKK SDSLPVFDDP GRDGDDLLFK DVFSGPPPPK YGSSSGDSRS PSAPAFDYDA
101: MFKEPKSKSA SSMPVYDKPV YDDEDVFESI PELKIPSTSS QSARFENVFS SISSSPTKHR KQNSSPFDDL MGNNLGKKGA DSDREEKGSS IFDDLIPGFG
201: RTSSPPSKRT TSETTNQSEK APYRTAETSS NVEEDPFVVL EESESTPREP SRTDPLDDIG KFNSRKTDHS SVHGGVFVDI DPLDNLGKPG PDMNSKGKSH
301: LRPPGNISGS QSPPVESPGS YHSKKVSFED FLEPHNMSTP PPTNSNGSFE SSDDVWLTVS EIPLFTQPTS APPPTRPPPP RPTRPIKKKV NEPSIPTSAY
401: HSHVPSSGRA SVNSPTASQM DELDDFSIGR NQTAANGYPD PSSGEDSDVF STAAASAAAM KDAMDKAEAK FRHAKERREK ENLKASRSRE GDHTENYDSR
501: ERELREKQVR LDRERAEREA EMEKAQEREK EEREREQKRI ERERERLVAR QAVERATREA RERAATEAHA KVQRAAVGKA TDARERAERA AVQRAHAEAR
601: ERAAAGARDK AAKAAAEARE KAEKAAAEAK ERANAEAREK ETRVRAERAA VERAAAEARG RAAAQAKAKQ QQENTNDLDS FFSSISRPNS APRQRTNPLD
701: PFQDSWNKGG SFESSRESLR VPPGQPENLR KTSSVTNIVD DLSSIFGASA SQSGGFQDVD GETEERRRAR LERHQRTQER AAKALAEKNE RDLQVQREQV
801: EKDRIGVTLD VEIKRWGAGK EGNLRALLST LQYVLWPECG WQPVSLTDLI TAASVKKVYR KATLCIHPDK VQQKGANLQQ KYIAEKVFDM LKEAWNKFNS
901: EELF

Arabidopsis Description

AUXI1Auxilin-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU08]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.