Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014876.1-P | Field mustard | nucleus | 81.98 | 85.94 |
| CDX77599 | Canola | nucleus | 81.98 | 85.75 |
| CDX90242 | Canola | nucleus | 78.02 | 84.93 |
| Bra010780.1-P | Field mustard | nucleus | 77.58 | 84.45 |
| CDX98192 | Canola | nucleus | 79.56 | 83.99 |
| CDY70725 | Canola | nucleus | 78.24 | 82.79 |
| CDY26275 | Canola | cytosol | 78.68 | 82.68 |
| Bra032375.1-P | Field mustard | cytosol | 78.46 | 82.45 |
| CDY54130 | Canola | cytosol | 48.35 | 78.85 |
| CDY21468 | Canola | cytosol | 58.68 | 78.07 |
| KRH37791 | Soybean | nucleus | 43.74 | 42.52 |
| KRH12827 | Soybean | nucleus | 42.86 | 41.85 |
| VIT_10s0003g04050.t01 | Wine grape | nucleus | 43.52 | 40.74 |
| KRH58698 | Soybean | nucleus | 40.22 | 39.35 |
| KRH44795 | Soybean | nucleus | 38.46 | 38.63 |
| KRH42596 | Soybean | nucleus | 39.34 | 37.6 |
| AT1G75100.1 | Thale cress | nucleus | 18.68 | 13.06 |
| AT1G21660.1 | Thale cress | nucleus | 14.95 | 13.0 |
| AT4G12770.1 | Thale cress | nucleus | 21.54 | 11.0 |
| AT4G12780.1 | Thale cress | nucleus | 20.88 | 10.51 |
| AT4G36520.1 | Thale cress | nucleus, plastid | 19.56 | 6.26 |
| AT1G75310.2 | Thale cress | nucleus | 19.56 | 6.13 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:22.1.6.4 | EntrezGene:839908 | UniProt:A0A178W9A2 | ProteinID:AAG50567.1 | ProteinID:AEE31202.1 |
| ArrayExpress:AT1G30280 | EnsemblPlantsGene:AT1G30280 | RefSeq:AT1G30280 | TAIR:AT1G30280 | RefSeq:AT1G30280-TAIR-G | EnsemblPlants:AT1G30280.1 |
| TAIR:AT1G30280.1 | EMBL:AY070092 | EMBL:AY117364 | Unigene:At.28397 | InterPro:DnaJ_domain | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0006898 | GO:GO:0008150 | GO:GO:0031982 | InterPro:IPR001623 | InterPro:IPR036869 |
| InterPro:J_dom_sf | RefSeq:NP_174319.1 | ProteinID:OAP14351.1 | PO:PO:0000293 | PANTHER:PTHR23172 | PANTHER:PTHR23172:SF39 |
| UniProt:Q9C752 | SUPFAM:SSF46565 | UniParc:UPI00000482FA | SEG:seg | : | : |
Description
Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C752]
Coordinates
chr1:-:10662621..10664668
Molecular Weight (calculated)
50709.2 Da
IEP (calculated)
4.948
GRAVY (calculated)
-0.915
Length
455 amino acids
Sequence
(BLAST)
(BLAST)
001: MDESWRMKMG LSVDPFFSIA RKSMDARIDA EDFADVFGGP PRSVLTRKFS GDFSRSDCFY DEIFQPPGTF SSGGSLASSK SHGRNLPAFR IPSGGEGFYD
101: GVFGGRGGSA KEGSKKQSSM TKPRSNSSSM LSSEEASPHY PPPAAASGDD SGFSSFTSRL RPLNVPSRSH KRESKKQSFS AVPKAKDSFS GQNNTPEKAD
201: FYYKKTHFGG SRRASPETIS LDPNSFRRMD DYGPSSPASS PVSSFICEEE DDNTHAKQRT NRDCKVEEVV VEDEEDEEEE EMSSYVIEIN SDRFDRYREE
301: GGGGGGNSDS NDMDEAIAWA KERSQRPEAK QTEEDVIDSR RSEEEPKSEE EMEMEMKDEE IRIWLTGKET NIRLLLSTLH HVLWSNSNWD SIPLANLRDG
401: SQVKKAYQRA RLCLHPDKLQ QRGGTSPIQK SVASRVFAIL QEAWAVYVTN EGLSS
101: GVFGGRGGSA KEGSKKQSSM TKPRSNSSSM LSSEEASPHY PPPAAASGDD SGFSSFTSRL RPLNVPSRSH KRESKKQSFS AVPKAKDSFS GQNNTPEKAD
201: FYYKKTHFGG SRRASPETIS LDPNSFRRMD DYGPSSPASS PVSSFICEEE DDNTHAKQRT NRDCKVEEVV VEDEEDEEEE EMSSYVIEIN SDRFDRYREE
301: GGGGGGNSDS NDMDEAIAWA KERSQRPEAK QTEEDVIDSR RSEEEPKSEE EMEMEMKDEE IRIWLTGKET NIRLLLSTLH HVLWSNSNWD SIPLANLRDG
401: SQVKKAYQRA RLCLHPDKLQ QRGGTSPIQK SVASRVFAIL QEAWAVYVTN EGLSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.