Factsheet for TraesCS3A01G035500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G048700.1	Wheat	cytosol	74.04	93.9
TraesCS3A01G035400.1	Wheat	cytosol	72.12	90.91
HORVU3Hr1G006930.1	Barley	cytosol	69.71	87.88
Os01t0135900-02	Rice	plasma membrane	52.4	65.66
EES02533	Sorghum	cytosol	50.48	63.64
Zm00001d039941_P001	Maize	cytosol	49.52	62.05
HORVU3Hr1G006940.2	Barley	cytosol	60.1	51.44
TraesCS4A01G092200.1	Wheat	cytosol	33.17	45.7
TraesCS3A01G033900.1	Wheat	cytosol	32.21	44.37
TraesCS3A01G034500.1	Wheat	cytosol	32.21	44.37
TraesCS3A01G034000.1	Wheat	cytosol	32.21	44.37
TraesCS4A01G092900.1	Wheat	cytosol	33.65	44.3
TraesCS4A01G092600.1	Wheat	cytosol	32.69	43.87
TraesCS4A01G092100.1	Wheat	cytosol	33.17	43.67
TraesCS4A01G092700.1	Wheat	cytosol	32.21	43.23
TraesCS4A01G092800.1	Wheat	cytosol	32.21	42.41
GSMUA_Achr6P33860_001	Banana	cytosol	32.69	41.21
GSMUA_Achr9P03540_001	Banana	cytosol	31.25	40.62
VIT_13s0019g03170.t01	Wine grape	cytosol	30.29	39.62
GSMUA_Achr7P14910_001	Banana	cytosol	27.4	33.93
TraesCS7A01G183800.1	Wheat	cytosol	25.0	33.55
GSMUA_Achr8P00290_001	Banana	cytosol	21.63	31.03
TraesCS7A01G202200.1	Wheat	mitochondrion, peroxisome	18.75	28.26
KRH49235	Soybean	cytosol	20.67	27.56
KRH00090	Soybean	cytosol	22.12	26.9
PGSC0003DMT400049226	Potato	cytosol	24.52	26.15
Solyc09g011710.2.1	Tomato	cytosol	25.48	25.48
PGSC0003DMT400030603	Potato	cytosol	23.08	24.87
TraesCS6A01G087600.1	Wheat	cytosol	22.12	24.86
KRH62434	Soybean	cytosol	18.27	24.2
TraesCS2A01G312900.1	Wheat	endoplasmic reticulum, golgi	23.56	22.37
TraesCS4A01G226700.1	Wheat	plastid	25.48	21.37
PGSC0003DMT400049225	Potato	mitochondrion	23.56	20.94
Solyc10g086680.1.1	Tomato	mitochondrion	23.08	20.51

Protein Annotations

EnsemblPlants:TraesCS3A01G035500.1	EnsemblPlantsGene:TraesCS3A01G035500	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	InterPro:HSP20	InterPro:HSP20-like_chaperone
InterPro:IPR002068	InterPro:IPR008978	PANTHER:PTHR11527	PANTHER:PTHR11527:SF141	PFAM:PF00011	PFscan:PS01031
SEG:seg	SUPFAM:SSF49764	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr3A:-:19608837..19609463

Molecular Weight (calculated)

22702.0 Da

IEP (calculated)

5.333

GRAVY (calculated)

-0.008

Length

208 amino acids

Sequence
(BLAST)

001: MLSSSINIRG LAISQLQAST QRYLFSKLAF RTHIGTHISK LNERMSLVRF FDTLALDSWN PFGSIFCTTA SSGTDAWLAS DTTAFADTYI ESRETAEAYV
101: FSARLPAGVT KEEVKVEVEE DGKVLVIAGE RCLRREAKSE MRHHVERSSA TFFGRFYLPD DAALGQVRAS MDDGGAQLTV TVPRVGAAVP VSMPEPAVAI
201: EVVEACPC

Best Arabidopsis Sequence Match ( AT1G07400.1 )
(BLAST)

001: MSLIPSFFGN NRRSNSIFDP FSLDVWDPFK ELQFPSSLSG ETSAITNARV DWKETAEAHV FKADLPGMKK EEVKVEIEDD SVLKISGERH VEKEEKQDTW
101: HRVERSSGQF SRKFKLPENV KMDQVKASME NGVLTVTVPK VEEAKKKAQV KSIDISG

Arabidopsis Description

HSP17.817.8 kDa class I heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.