CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 4
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50107	Soybean	cytosol	96.73	96.73
KRH50109	Soybean	cytosol	92.81	92.81
KRH20402	Soybean	cytosol	91.5	90.91
KRH50102	Soybean	cytosol	90.85	90.85
KRH42103	Soybean	cytosol	90.85	90.85
KRH42102	Soybean	cytosol	90.85	90.85
KRH20400	Soybean	cytosol	90.85	90.26
KRH20397	Soybean	cytosol	90.85	90.26
KRH42105	Soybean	cytosol	89.54	89.54
KRH53964	Soybean	cytosol	85.62	87.33
KRH50104	Soybean	endoplasmic reticulum	90.85	86.34
PGSC0003DMT400078008	Potato	cytosol	84.97	84.42
KRH20405	Soybean	cytosol	83.66	84.21
KRH63973	Soybean	cytosol	77.12	83.69
KRH20403	Soybean	cytosol	87.58	83.23
Solyc06g076570.1.1	Tomato	cytosol, extracellular, nucleus	83.66	83.12
PGSC0003DMT400078006	Potato	cytosol	83.01	82.47
PGSC0003DMT400038705	Potato	cytosol	71.24	81.95
Solyc06g076540.1.1	Tomato	cytosol, nucleus	82.35	81.82
PGSC0003DMT400078007	Potato	cytosol	81.7	81.17
PGSC0003DMT400078202	Potato	cytosol	81.05	80.52
Solyc06g076560.1.1	Tomato	cytosol, nucleus	81.05	80.52
Solyc06g076520.1.1	Tomato	cytosol, nucleus, plastid	80.39	79.87
PGSC0003DMT400078201	Potato	cytosol	79.74	79.22
AT2G29500.1	Thale cress	cytosol	76.47	76.47
CDY53371	Canola	cytosol	77.78	76.28
CDY45448	Canola	cytosol	77.78	76.28
KRH57663	Soybean	cytosol	67.32	75.74
Bra018383.1-P	Field mustard	cytosol	77.12	75.64
KRH15019	Soybean	cytosol, endoplasmic reticulum	76.47	74.52
KRH73111	Soybean	cytosol, endoplasmic reticulum, nucleus	74.51	74.51
CDX97881	Canola	cytosol	74.51	74.51
CDY51363	Canola	cytosol	73.86	74.34
KRH15020	Soybean	cytosol	77.12	74.21
AT1G59860.1	Thale cress	cytosol	74.51	73.55
AT1G07400.1	Thale cress	cytosol	73.86	71.97
KRH75757	Soybean	cytosol	66.01	70.14
CDY53372	Canola	cytosol, plastid	70.59	69.68
Bra018384.1-P	Field mustard	cytosol	71.24	68.55
Bra031725.1-P	Field mustard	cytosol	71.24	68.55
CDY45447	Canola	cytosol	71.24	68.55
KRH50108	Soybean	cytosol, plastid	44.44	49.28
KRH70223	Soybean	cytosol, nucleus	46.41	46.41
KRH72979	Soybean	cytosol, mitochondrion, peroxisome	43.14	45.83
KRH17351	Soybean	mitochondrion	42.48	45.14
KRH24720	Soybean	cytosol	38.56	42.75
KRH29724	Soybean	cytosol, plastid	40.52	41.89
KRH49235	Soybean	cytosol	41.83	41.03
KRH00090	Soybean	cytosol	45.75	40.94
KRG92477	Soybean	endoplasmic reticulum	48.37	38.54
KRH34328	Soybean	endoplasmic reticulum	48.37	37.95
KRH62434	Soybean	cytosol	37.91	36.94
KRH13798	Soybean	cytosol	40.52	36.9
KRG93360	Soybean	endoplasmic reticulum	47.06	36.55
KRH18614	Soybean	endoplasmic reticulum	46.41	35.86
KRH09251	Soybean	endoplasmic reticulum	45.1	35.03
KRG90262	Soybean	endoplasmic reticulum	41.18	32.31

Protein Annotations

EMBL:ACUP02004659	EMBL:BT091695	EnsemblPlants:KRH50105	EnsemblPlantsGene:GLYMA_07G200300	EntrezGene:100526893	Gene3D:2.60.40.790
InterPro:A-crystallin/Hsp20_dom	InterPro:HSP20	InterPro:HSP20-like_chaperone	InterPro:IPR002068	InterPro:IPR008978	PANTHER:PTHR11527
PANTHER:PTHR11527:SF190	PFAM:PF00011	PFscan:PS01031	ProteinID:KRH50105	ProteinID:KRH50105.1	SEG:seg
SUPFAM:SSF49764	UniParc:UPI0001B15127	UniProt:C6T2N6	MapMan:19.1.8.1	:	:

Description

hypothetical protein

Coordinates

chr7:-:36883500..36884465

Molecular Weight (calculated)

17514.7 Da

IEP (calculated)

5.788

GRAVY (calculated)

-0.686

Length

153 amino acids

Sequence
(BLAST)

001: MSLIPSIFGG RRSNVFDPFS LDVWDPFKDF HFPTSLSAEN SASVNTRVDW KETPEAHVFK ADIPGLKKEE VKVEIEDDRV LQISGERNLE KEDKNDTWHR
101: LERSSGKFMR RFRLPENAKV EQVKASMENG VLTVTVPKEE VKKPDVKAIE ISG

Best Arabidopsis Sequence Match ( AT1G07400.1 )
(BLAST)

001: MSLIPSFFGN NRRSNSIFDP FSLDVWDPFK ELQFPSSLSG ETSAITNARV DWKETAEAHV FKADLPGMKK EEVKVEIEDD SVLKISGERH VEKEEKQDTW
101: HRVERSSGQF SRKFKLPENV KMDQVKASME NGVLTVTVPK VEEAKKKAQV KSIDISG

Arabidopsis Description

HSP17.817.8 kDa class I heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.