Skip to main content
crop-pal logo
Wine grape
Search for another protein from :
Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 5
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:cytosol, plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_13s0019g02840.t01 Wine grape cytosol 99.34 99.34
VIT_13s0019g02820.t01 Wine grape cytosol 98.68 98.68
VIT_13s0019g02760.t01 Wine grape cytosol 90.73 97.86
VIT_13s0019g02780.t01 Wine grape cytosol 96.03 96.03
VIT_13s0019g02850.t01 Wine grape cytosol 95.36 95.36
VIT_13s0019g02740.t01 Wine grape cytosol 93.38 93.38
VIT_13s0019g03030.t01 Wine grape cytosol 52.98 74.07
VIT_13s0019g02900.t01 Wine grape cytosol 52.32 73.15
VIT_06s0004g05770.t01 Wine grape cytosol 68.87 72.22
VIT_13s0019g02920.t01 Wine grape cytosol 64.24 71.32
VIT_13s0019g02930.t01 Wine grape cytosol 75.5 71.25
VIT_13s0019g03000.t01 Wine grape cytosol 75.5 71.25
VIT_13s0019g03090.t01 Wine grape cytosol 72.85 68.75
VIT_08s0058g00210.t01 Wine grape cytosol 66.89 68.24
VIT_13s0019g03160.t01 Wine grape cytosol 71.52 67.5
VIT_13s0019g03010.t01 Wine grape cytosol, mitochondrion 62.25 65.28
VIT_13s0019g03170.t01 Wine grape cytosol 66.23 62.89
VIT_13s0019g03050.t01 Wine grape cytosol 62.91 57.58
VIT_18s0001g01570.t01 Wine grape mitochondrion 49.67 46.01
VIT_19s0085g01050.t01 Wine grape cytosol 43.05 44.52
VIT_18s0001g01610.t01 Wine grape cytosol 46.36 44.03
VIT_13s0019g00860.t01 Wine grape cytosol 38.41 40.85
VIT_18s0089g01270.t01 Wine grape endoplasmic reticulum 41.06 33.33
VIT_12s0035g01910.t01 Wine grape cytosol 40.4 24.4
Protein Annotations
EntrezGene:100244376wikigene:100244376MapMan:19.1.8.1Gene3D:2.60.40.790InterPro:A-crystallin/Hsp20_domProteinID:CCB56280
ProteinID:CCB56280.1UniProt:F6HNR1EMBL:FN595998InterPro:HSP20InterPro:HSP20-like_chaperoneInterPro:IPR002068
InterPro:IPR008978EntrezGene:LOC100244376wikigene:LOC100244376PFAM:PF00011PFscan:PS01031PANTHER:PTHR11527
PANTHER:PTHR11527:SF241SUPFAM:SSF49764TIGR:TC53184TIGR:TC68296UniParc:UPI00015C932FArrayExpress:VIT_13s0019g02770
EnsemblPlantsGene:VIT_13s0019g02770EnsemblPlants:VIT_13s0019g02770.t01unigene:Vvi.24419RefSeq:XP_002281260RefSeq:XP_002281260.1RefSeq:XP_002281394
RefSeq:XP_002281394.1SEG:seg::::
Description
No Description!
Coordinates
chr13:-:4006363..4007091
Molecular Weight (calculated)
17105.4 Da
IEP (calculated)
5.872
GRAVY (calculated)
-0.554
Length
151 amino acids
Sequence
(BLAST)
001: MSLIPSFFGG RRNNMFDLWD PFQDFPFIGG ALSVPGETAS FANTRIDWKE TPEAHVFKAD LPGVKKEEVK VEVEEGRILQ ISGDRSVEKE EKNDKWHRVE
101: RSSGQFMRRF RLPENVKVEE VKAAMENGVL TVTVPKAEVK KPDVKAIDIS G
Best Arabidopsis Sequence Match ( AT1G07400.1 )
(BLAST)
001: MSLIPSFFGN NRRSNSIFDP FSLDVWDPFK ELQFPSSLSG ETSAITNARV DWKETAEAHV FKADLPGMKK EEVKVEIEDD SVLKISGERH VEKEEKQDTW
101: HRVERSSGQF SRKFKLPENV KMDQVKASME NGVLTVTVPK VEEAKKKAQV KSIDISG
Arabidopsis Description
HSP17.817.8 kDa class I heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.