Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 5
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_13s0019g02770.t01 | Wine grape | cytosol | 99.34 | 99.34 |
| VIT_13s0019g02820.t01 | Wine grape | cytosol | 98.01 | 98.01 |
| VIT_13s0019g02760.t01 | Wine grape | cytosol | 90.07 | 97.14 |
| VIT_13s0019g02780.t01 | Wine grape | cytosol | 96.03 | 96.03 |
| VIT_13s0019g02850.t01 | Wine grape | cytosol | 95.36 | 95.36 |
| VIT_13s0019g02740.t01 | Wine grape | cytosol | 92.72 | 92.72 |
| VIT_13s0019g03030.t01 | Wine grape | cytosol | 52.32 | 73.15 |
| VIT_13s0019g02900.t01 | Wine grape | cytosol | 51.66 | 72.22 |
| VIT_06s0004g05770.t01 | Wine grape | cytosol | 68.21 | 71.53 |
| VIT_13s0019g02930.t01 | Wine grape | cytosol | 74.83 | 70.62 |
| VIT_13s0019g03000.t01 | Wine grape | cytosol | 74.83 | 70.62 |
| VIT_13s0019g02920.t01 | Wine grape | cytosol | 63.58 | 70.59 |
| VIT_13s0019g03090.t01 | Wine grape | cytosol | 72.19 | 68.12 |
| VIT_08s0058g00210.t01 | Wine grape | cytosol | 66.23 | 67.57 |
| VIT_13s0019g03160.t01 | Wine grape | cytosol | 70.86 | 66.88 |
| VIT_13s0019g03010.t01 | Wine grape | cytosol, mitochondrion | 61.59 | 64.58 |
| VIT_13s0019g03170.t01 | Wine grape | cytosol | 65.56 | 62.26 |
| VIT_13s0019g03050.t01 | Wine grape | cytosol | 62.25 | 56.97 |
| VIT_18s0001g01570.t01 | Wine grape | mitochondrion | 49.67 | 46.01 |
| VIT_19s0085g01050.t01 | Wine grape | cytosol | 43.05 | 44.52 |
| VIT_18s0001g01610.t01 | Wine grape | cytosol | 46.36 | 44.03 |
| VIT_13s0019g00860.t01 | Wine grape | cytosol | 37.75 | 40.14 |
| VIT_18s0089g01270.t01 | Wine grape | endoplasmic reticulum | 41.06 | 33.33 |
| VIT_12s0035g01910.t01 | Wine grape | cytosol | 40.4 | 24.4 |
Protein Annotations
| EntrezGene:100259921 | wikigene:100259921 | MapMan:19.1.8.1 | Gene3D:2.60.40.790 | InterPro:A-crystallin/Hsp20_dom | ProteinID:CCB56275 |
| ProteinID:CCB56275.1 | UniProt:F6HNQ6 | EMBL:FN595998 | InterPro:HSP20 | InterPro:HSP20-like_chaperone | InterPro:IPR002068 |
| InterPro:IPR008978 | EntrezGene:LOC100259921 | wikigene:LOC100259921 | PFAM:PF00011 | PFscan:PS01031 | PANTHER:PTHR11527 |
| PANTHER:PTHR11527:SF241 | SUPFAM:SSF49764 | UniParc:UPI00019847FA | ArrayExpress:VIT_13s0019g02840 | EnsemblPlantsGene:VIT_13s0019g02840 | EnsemblPlants:VIT_13s0019g02840.t01 |
| RefSeq:XP_002281260.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr13:-:4043383..4044010
Molecular Weight (calculated)
17091.3 Da
IEP (calculated)
5.384
GRAVY (calculated)
-0.551
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLIPSFFGG RRNNMFDLWD PFQDFPFIGG ALSVPGETAS FANTRIDWKE TPEAHVFKAD LPGVKKEEVK VEVEEGRILQ ISGDRSVEKE EKNDKWHRVE
101: RSSGQFMRRF RLPENVKVEE VKAAMENGVL TVTVPKAEVN KPDVKAIDIS G
101: RSSGQFMRRF RLPENVKVEE VKAAMENGVL TVTVPKAEVN KPDVKAIDIS G
001: MSLIPSFFGN NRRSNSIFDP FSLDVWDPFK ELQFPSSLSG ETSAITNARV DWKETAEAHV FKADLPGMKK EEVKVEIEDD SVLKISGERH VEKEEKQDTW
101: HRVERSSGQF SRKFKLPENV KMDQVKASME NGVLTVTVPK VEEAKKKAQV KSIDISG
101: HRVERSSGQF SRKFKLPENV KMDQVKASME NGVLTVTVPK VEEAKKKAQV KSIDISG
Arabidopsis Description
HSP17.817.8 kDa class I heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.