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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 3
  • nucleus 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, secretory
BaCelLo:secretory
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_13s0019g03030.t01 Wine grape cytosol 58.11 79.63
VIT_13s0019g02900.t01 Wine grape cytosol 56.76 77.78
VIT_13s0019g02920.t01 Wine grape cytosol 69.59 75.74
VIT_13s0019g03000.t01 Wine grape cytosol 81.76 75.62
VIT_13s0019g02930.t01 Wine grape cytosol 81.76 75.62
VIT_13s0019g03090.t01 Wine grape cytosol 79.73 73.75
VIT_13s0019g03160.t01 Wine grape cytosol 76.35 70.62
VIT_13s0019g03010.t01 Wine grape cytosol, mitochondrion 68.24 70.14
VIT_06s0004g05770.t01 Wine grape cytosol 66.89 68.75
VIT_13s0019g02850.t01 Wine grape cytosol 68.92 67.55
VIT_13s0019g02780.t01 Wine grape cytosol 68.92 67.55
VIT_13s0019g02760.t01 Wine grape cytosol 63.51 67.14
VIT_13s0019g02820.t01 Wine grape cytosol 68.24 66.89
VIT_13s0019g02770.t01 Wine grape cytosol 68.24 66.89
VIT_13s0019g02840.t01 Wine grape cytosol 67.57 66.23
VIT_13s0019g02740.t01 Wine grape cytosol 66.22 64.9
VIT_13s0019g03170.t01 Wine grape cytosol 66.22 61.64
VIT_13s0019g03050.t01 Wine grape cytosol 64.19 57.58
VIT_19s0085g01050.t01 Wine grape cytosol 45.27 45.89
VIT_18s0001g01570.t01 Wine grape mitochondrion 47.97 43.56
VIT_13s0019g00860.t01 Wine grape cytosol 40.54 42.25
VIT_18s0001g01610.t01 Wine grape cytosol 45.27 42.14
VIT_18s0089g01270.t01 Wine grape endoplasmic reticulum 43.24 34.41
VIT_12s0035g01910.t01 Wine grape cytosol 43.92 26.0
Protein Annotations
EntrezGene:100259051wikigene:100259051MapMan:19.1.8.1Gene3D:2.60.40.790InterPro:A-crystallin/Hsp20_domProteinID:CCB44830
ProteinID:CCB44830.1UniProt:F6GXV0EMBL:FN594967InterPro:HSP20InterPro:HSP20-like_chaperoneInterPro:IPR002068
InterPro:IPR008978EntrezGene:LOC100259051wikigene:LOC100259051PFAM:PF00011PFscan:PS01031PANTHER:PTHR11527
PANTHER:PTHR11527:SF183SUPFAM:SSF49764UniParc:UPI00015CCBA4ArrayExpress:VIT_08s0058g00210EnsemblPlantsGene:VIT_08s0058g00210EnsemblPlants:VIT_08s0058g00210.t01
RefSeq:XP_002270205RefSeq:XP_002270205.1SEG:seg:::
Description
No Description!
Coordinates
chr8:+:8901763..8902216
Molecular Weight (calculated)
16879.1 Da
IEP (calculated)
5.869
GRAVY (calculated)
-0.629
Length
148 amino acids
Sequence
(BLAST)
001: MSLFIPSCMF DPFSLDIWDP FKGFPFSTTL ADPERSAFSS TSCDWKETPD AHIFKADLPG LKKEEVTVEV EEGRVLQISG ERSKEQEDKN GKWHQIERSR
101: GKFLRRFRLP ENAKMDEVKA SMENGVLTVT VPKEEVKKPK VKAIEISG
Best Arabidopsis Sequence Match ( AT1G07400.1 )
(BLAST)
001: MSLIPSFFGN NRRSNSIFDP FSLDVWDPFK ELQFPSSLSG ETSAITNARV DWKETAEAHV FKADLPGMKK EEVKVEIEDD SVLKISGERH VEKEEKQDTW
101: HRVERSSGQF SRKFKLPENV KMDQVKASME NGVLTVTVPK VEEAKKKAQV KSIDISG
Arabidopsis Description
HSP17.817.8 kDa class I heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.