Factsheet for VIT_06s0061g01560.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
vacuole 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0074g00730.t01	Wine grape	cytosol	60.89	79.19
PGSC0003DMT400068252	Potato	nucleus	80.22	76.32
Solyc11g067080.1.1	Tomato	nucleus	78.0	75.97
KRH26592	Soybean	nucleus	76.0	75.5
GSMUA_Achr6P17280_001	Banana	cytosol, plastid	47.56	72.79
GSMUA_Achr10P...	Banana	cytosol, plastid	50.22	70.41
KRH25188	Soybean	nucleus, plastid	67.56	69.72
Bra019427.1-P	Field mustard	cytosol, plastid	67.56	68.93
KRH22717	Soybean	nucleus	76.0	68.81
KRH30493	Soybean	cytosol, plastid	67.33	68.71
CDY08710	Canola	cytosol, plastid	67.11	68.48
AT3G44610.1	Thale cress	cytosol, plastid	68.44	68.29
Os12t0149700-01	Rice	cytosol	48.0	63.91
Os11t0150700-00	Rice	cytosol, plastid	60.89	59.83
TraesCS5D01G137200.1	Wheat	plastid	60.89	58.67
TraesCS5B01G128400.1	Wheat	plastid	60.22	58.03
TraesCS5A01G129700.1	Wheat	plastid	60.67	57.35
HORVU5Hr1G041960.1	Barley	plastid	61.33	52.37
Zm00001d052523_P001	Maize	nucleus, plastid	59.11	51.95
EES07987	Sorghum	nucleus, plastid	59.33	51.35
VIT_19s0085g01140.t01	Wine grape	cytosol	47.33	48.3
VIT_11s0016g04910.t01	Wine grape	nucleus, plastid	46.44	44.47
VIT_10s0003g04320.t01	Wine grape	cytosol, plastid	44.44	44.35
VIT_14s0066g02140.t01	Wine grape	cytosol	47.33	39.59
VIT_19s0015g00770.t01	Wine grape	extracellular	51.56	37.97
VIT_10s0116g00440.t01	Wine grape	plastid	50.89	36.94
VIT_19s0027g00020.t01	Wine grape	nucleus, plastid	38.89	36.92
VIT_14s0066g00460.t01	Wine grape	cytosol, plastid	49.33	32.74
VIT_15s0021g01540.t01	Wine grape	cytosol	49.33	31.18
VIT_08s0007g03600.t01	Wine grape	cytosol	48.0	25.0
VIT_06s0061g01540.t01	Wine grape	cytosol	48.22	24.69

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100263703	wikigene:100263703	Gene3D:3.30.200.20	MapMan:50.2.7	EMBL:AM458996
ProteinID:CAN83229	ProteinID:CAN83229.1	ProteinID:CCB44170	ProteinID:CCB44170.1	UniProt:F6GW35	EMBL:FN594957
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100263703
wikigene:LOC100263703	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351	PANTHER:PTHR24351:SF104
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000198390B	ArrayExpress:VIT_06s0061g01560
EnsemblPlantsGene:VIT_06s0061g01560	EnsemblPlants:VIT_06s0061g01560.t01	unigene:Vvi.25121	RefSeq:XP_002266280	RefSeq:XP_002266280.2	RefSeq:XP_002266280.3
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6:+:19464024..19467004

Molecular Weight (calculated)

49428.8 Da

IEP (calculated)

6.153

GRAVY (calculated)

-0.255

Length

450 amino acids

Sequence
(BLAST)

001: MEPWLEDSTD DSKSMSFNST TTATDINRST SSGSETTWTT AASGGFPPAT SKPHASSGDP CWDGIRRARS ESPAGALSFS DLRFVQRLGS GDIGSVYLVE
101: LKAAEGCSFA AKIMDKKELA GRNKEGRART EREILEMLDH PFLPALYATI DSPKCSCLLT EFCPGGDLHV LRQRQPAKRF HESAVRFYAS EVVVALEYVH
201: MMGIVYRDLK PENVLVRSDG HIMLTDFDLS LKCDHSTSVA QIISDQNPPL ALPPSDYPAD PPPFTSSSCI LPNCIVPAVS CFHPKRKRKK KPGHHGGPEF
301: VAEPVDVRSM SFVGTHEYLA PEIVSGEGHG SAVDWWTLGI FIFELLYGVT PFRGVDNELT LANIVARALE FPKEPLVPAT TKDLISQLLV KDPARRMGST
401: MGASAIKHHP FFQGVNWALL RCTPPPFIPP PFNRDVVSDE SCPETPMDYY

Best Arabidopsis Sequence Match ( AT3G44610.1 )
(BLAST)

001: MEPWIDELTD DLQSVSFTSA GTTVNRSTSS GSRSSSSAAA LTPAPSAHGS FSSSKLPPSL RSSLSLSDLR FRLRLGSGDI GSVFLAEFKS LTAVTETTAV
101: KLPLLAAKVM DKKELASRSK EGRAKTEREI LESLDHPFLP TLYAAIDSPK WLCLLTEFCP GGDLHVLRQK QTHKRFHESA VRFYVSEVIV AIEYLHMLGI
201: VYRDLKPENV LVRSDGHIML TDFDLSLKCD ESTSTPQIVL NRNNLPNGSS DQNENQGMDH RQTTSSSCMI PNCIVPAVSC FHPRIRRRKK KTDHRNNGPE
301: LVAEPVDVRS MSFVGTHEYL APEIVSGEGH GSAVDWWTLG IFMFELFYGT TPFKGMDHEL TLANIVARAL EFPKEPTIPS AAKDLISQLL AKDPSRRLGS
401: SLGATAVKRH PFFQGVNWAL LMCTRPPFLP PPFRKELLSD DICPETHVDY Y

Arabidopsis Description

At3g44610 [Source:UniProtKB/TrEMBL;Acc:Q0V7S5]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.