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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 4
  • vacuole 1
  • mitochondrion 1
  • cytosol 2
  • nucleus 2
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plastid, vacuole
BaCelLo:plastid
EpiLoc:vacuole
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:nucleus
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:nucleus
YLoc:cytosol
nucleus: 15276429
msms PMID: 15276429 doi
MM Khan, S Komatsu
Department of Molecular Genetics, National Institute of Agrobiological Sciences, Kannondai 2-1-2, Tsukuba 305-8602, Japan.
PPI

Inferred distinct locusB in Crop

locusBlocations
Os01t0872800-01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G47750.1 Os01t0872800-01 AT5G04510.1 16973627
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7A01G216200.1 Wheat cytosol, plastid 82.34 83.91
TraesCS7B01G123400.1 Wheat cytosol 82.0 83.56
TraesCS7D01G218000.1 Wheat cytosol, plastid 81.83 83.39
HORVU7Hr1G043790.1 Barley plastid 80.81 82.07
Os02t0725000-01 Rice cytosol 77.42 77.55
KXG19822 Sorghum cytosol, plastid 75.72 76.63
Bra024918.1-P Field mustard cytosol 64.18 68.23
CDY17708 Canola cytosol 64.18 68.23
VIT_19s0015g00770.t01 Wine grape extracellular 69.78 67.27
CDX77795 Canola cytosol 65.2 67.25
Os09t0478500-01 Rice cytosol 66.38 67.07
Os09t0258500-01 Rice cytosol, plasma membrane 64.52 67.02
Os08t0491200-01 Rice cytosol 67.57 67.0
AT5G47750.1 Thale cress cytosol, plastid 66.21 66.55
GSMUA_Achr4P06290_001 Banana cytosol 52.29 66.38
KRH36626 Soybean cytosol 68.08 65.95
VIT_10s0116g00440.t01 Wine grape plastid 69.1 65.65
KRH11623 Soybean cytosol 65.53 65.31
Solyc07g065710.2.1 Tomato plastid 66.89 65.23
PGSC0003DMT400022397 Potato plastid 67.74 65.09
PGSC0003DMT400057021 Potato plastid 66.72 65.07
Solyc10g005770.2.1 Tomato plastid 67.06 64.44
GSMUA_Achr4P13100_001 Banana cytosol 50.25 63.52
Os10t0562500-01 Rice cytosol 44.14 61.03
Os12t0480200-01 Rice cytosol 43.12 59.07
Os01t0233800-01 Rice plasma membrane 46.01 50.94
Os12t0149700-01 Rice cytosol 28.35 49.41
Os04t0546300-01 Rice cytosol 57.73 48.92
Os02t0654300-01 Rice cytosol 55.86 47.68
Os05t0237400-01 Rice plasma membrane 45.5 46.69
Os11t0150700-00 Rice cytosol, plastid 35.82 46.07
Os01t0174700-01 Rice cytosol 38.37 45.84
Os03t0642300-00 Rice plastid 33.79 43.17
Os12t0614600-01 Rice cytosol 34.13 41.53
Os03t0253200-01 Rice nucleus 28.69 33.27
Os04t0410200-00 Rice cytosol 18.34 21.47
Os08t0491000-01 Rice cytosol 14.6 21.23
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.6.5Gene3D:3.30.200.20EntrezGene:4340792EMBL:AK100261ProteinID:BAD54643.1
ProteinID:BAD69398.1ProteinID:BAF19335.1ProteinID:BAS97308.1EMBL:CM000143GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0005886GO:GO:0006464
GO:GO:0006468GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538GO:GO:0035556
InterPro:IPR000719InterPro:Kinase-like_dom_sfEnsemblPlantsGene:Os06g0291600EnsemblPlants:Os06t0291600-01PFAM:PF00069ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR24351PANTHER:PTHR24351:SF170InterPro:Prot_kinase_domUniProt:Q0DCT8SMART:SM00220
SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI00004470A6RefSeq:XP_015644461.1RefSeq:XP_015644462.1SEG:seg
Description
G11ASimilar to Protein kinase G11A (EC 2.7.1.-) (Fragment). (Os06t0291600-01)
Coordinates
chr6:-:10690711..10694167
Molecular Weight (calculated)
64811.2 Da
IEP (calculated)
8.167
GRAVY (calculated)
-0.412
Length
589 amino acids
Sequence
(BLAST)
001: MASKAMPRAP PAAPNLQSLK LCSQNDSSLE TTSPSKRSAL VPGRSAESSK PNPEVVQKEQ KSTQHQNESI DLTGSNDPAE VKAEGNLVPK RLADEEKGVV
101: EDGIANGSLK SSSALGKEHG IASASGSARL VGRSETGERG FSSSRCRPST SSDVSDESAC SSISSVTKPH KANDSRWEAI QMIRTRDGIL GLSHFKLLKK
201: LGCGDIGSVY LSELSGTKSY FAMKVMDKAS LASRKKLLRA QTEKEILQCL DHPFLPTLYT HFETDKFSCL VMEFCPGGDL HTLRQRQRGK YFPEQAVKFY
301: VAEILLAMEY LHMLGIIYRD LKPENVLVRE DGHIMLSDFD LSLRCAVSPT LIRSSNPDAE ALRKNNQAYC VQPACVEPSC MIQPSCATPT TCFGPRFFSK
401: SKKDRKPKPE VVNQVSPWPE LIAEPSDARS MSFVGTHEYL APEIIKGEGH GSAVDWWTFG IFLYELLFGK TPFKGSGNRA TLFNVIGQPL RFPEYPVVSF
501: SARDLIRGLL VKEPQQRLGC KRGATEIKQH PFFEGVNWAL IRCASPPEVP RPVEIERPPK QPVSTSEPAA APSDAAQKSS DSYLEFDFF
Best Arabidopsis Sequence Match ( AT5G47750.1 )
(BLAST)
001: MASTRKPSGH GAEVEAQKRS SSNSSTKSAK AETFEPMQLQ RSVTNPRAVG IPESKRLPES FRKRSSDPAV CKPDFSSLST VLEHVDSLTI DEKKTSGFGS
101: VKTSSASAKL SDGTSSLGKT SGSAKLSGRL DFMESGKSSI CRGSTSSDVS DESSCSSFSS TVNKPHKAND LRWEAIQAVR VRDGLLGLSH FRLLKRLGCG
201: DIGSVYLSEL SGTKCYFAMK VMDKTSLASR KKLLRAQTER EILQSLDHPF LPTLYTHFET EKFSCLVMEF CPGGDLHTLR QRQPGKHFSE QAVKFYIAES
301: LLALEYLHML GIVYRDLKPE NVLVREDGHI MLSDFDLSLR CLVSPTLVKS AAIESDPLRK NVYCVQPACI EPSCIQPSCT VPTTCFSPRL FSSKSKKDRK
401: PKNDTANQVR PLPELVAEPT DARSMSFVGT HEYLAPEIIK GEGHGSAVDW WTFGIFLYEL LFGRTPFKGS GNRQTLFNVV GQPLRFPETP VVSFAARDLI
501: RGLLMKEPQQ RLGFKRGATE VKQHPFFEGV NWALIRCATP PEIPKPVELE KGAVSVAEAP SSQKTAAGLV LNAQKGSDNY LEFDFF
Arabidopsis Description
D6PKL2Serine/threonine-protein kinase D6PKL2 [Source:UniProtKB/Swiss-Prot;Acc:Q39183]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.