Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G032570.1 | Barley | cytosol, plastid | 84.0 | 84.0 |
| HORVU7Hr1G029640.1 | Barley | cytosol, plastid | 86.0 | 82.17 |
| HORVU6Hr1G034200.1 | Barley | cytosol, plastid | 86.0 | 81.13 |
| HORVU4Hr1G081250.1 | Barley | cytosol | 32.67 | 80.33 |
| HORVU7Hr1G101640.1 | Barley | cytosol, plastid | 76.67 | 75.66 |
| HORVU4Hr1G085560.1 | Barley | cytosol, plastid | 86.0 | 72.88 |
| HORVU5Hr1G018360.1 | Barley | cytosol, plastid | 73.33 | 72.85 |
| HORVU6Hr1G076690.1 | Barley | cytosol | 71.33 | 71.33 |
| HORVU0Hr1G031990.1 | Barley | cytosol, plastid | 74.0 | 70.25 |
| HORVU1Hr1G023720.1 | Barley | cytosol, plastid | 74.67 | 70.0 |
| HORVU5Hr1G117570.1 | Barley | cytosol | 53.33 | 61.54 |
| HORVU5Hr1G077930.1 | Barley | cytosol | 58.67 | 59.06 |
| HORVU3Hr1G007420.1 | Barley | cytosol | 72.0 | 58.06 |
| TraesCS3D01G041500.1 | Wheat | cytosol | 71.33 | 57.84 |
| TraesCS3A01G038300.1 | Wheat | cytosol | 71.33 | 57.53 |
| TraesCS3B01G045500.1 | Wheat | cytosol | 70.0 | 56.15 |
| Os01t0135700-01 | Rice | plasma membrane | 58.67 | 48.62 |
| HORVU5Hr1G073590.1 | Barley | cytosol, plastid | 54.67 | 45.05 |
| TraesCS3D01G041400.1 | Wheat | cytosol, plastid | 70.0 | 44.12 |
| Zm00001d039944_P001 | Maize | cytosol, plastid | 52.67 | 40.51 |
| EES00360 | Sorghum | cytosol | 54.67 | 39.81 |
| Zm00001d008573_P001 | Maize | plastid | 54.0 | 39.51 |
| Solyc06g068960.1.1 | Tomato | endoplasmic reticulum, unclear | 34.67 | 33.77 |
| PGSC0003DMT400014742 | Potato | cytosol | 36.67 | 33.54 |
| PGSC0003DMT400074098 | Potato | cytosol | 34.0 | 33.12 |
| Solyc03g118810.1.1 | Tomato | cytosol | 35.33 | 32.32 |
| KRH24162 | Soybean | cytosol | 28.0 | 30.0 |
| Bra015979.1-P | Field mustard | cytosol | 30.0 | 28.3 |
| CDX96488 | Canola | cytosol | 30.0 | 28.3 |
| CDX72996 | Canola | cytosol | 30.0 | 28.3 |
| AT1G73630.1 | Thale cress | cytosol | 30.67 | 28.22 |
| Bra025924.1-P | Field mustard | cytosol | 31.33 | 28.14 |
| CDY70127 | Canola | cytosol | 31.33 | 28.14 |
| KRH41828 | Soybean | cytosol | 33.33 | 27.78 |
| HORVU1Hr1G057410.1 | Barley | mitochondrion | 34.67 | 27.51 |
| KRH48613 | Soybean | cytosol | 32.67 | 27.37 |
| AT1G18210.1 | Thale cress | cytosol | 30.67 | 27.06 |
| CDY19196 | Canola | cytosol | 31.33 | 26.55 |
| KRH15405 | Soybean | cytosol | 25.33 | 26.39 |
| KRH02767 | Soybean | cytosol | 26.67 | 26.32 |
| HORVU3Hr1G107090.2 | Barley | cytosol, plastid | 32.67 | 25.65 |
| CDX83860 | Canola | cytosol | 29.33 | 24.86 |
| CDX96729 | Canola | cytosol | 28.67 | 24.71 |
| Bra016564.1-P | Field mustard | cytosol | 28.0 | 24.14 |
| HORVU5Hr1G085800.2 | Barley | cytosol | 27.33 | 23.43 |
| KRH60530 | Soybean | plastid | 33.33 | 23.15 |
| HORVU1Hr1G029850.1 | Barley | cytosol | 34.67 | 22.81 |
| KRH16247 | Soybean | cytosol | 19.33 | 22.14 |
| HORVU5Hr1G068490.1 | Barley | cytosol | 12.0 | 20.93 |
| HORVU7Hr1G008910.2 | Barley | cytosol | 26.67 | 18.69 |
| HORVU4Hr1G050990.1 | Barley | plastid | 23.33 | 18.13 |
| HORVU5Hr1G043460.1 | Barley | plastid | 22.0 | 18.03 |
| HORVU7Hr1G072770.1 | Barley | plastid | 22.67 | 17.17 |
| HORVU7Hr1G027770.3 | Barley | endoplasmic reticulum | 22.67 | 14.85 |
| HORVU3Hr1G106950.3 | Barley | cytosol | 15.33 | 8.52 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G074240.1 | EnsemblPlantsGene:HORVU1Hr1G074240 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR10891 | PANTHER:PTHR10891:SF676 |
| PFAM:PF13202 | PFAM:PF13499 | PFscan:PS50222 | ScanProsite:PS00018 | SEG:seg | SMART:SM00054 |
| SUPFAM:SSF47473 | UniParc:UPI000B469317 | UniProt:A0A287G8K2 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr1H:+:507478263..507478804
Molecular Weight (calculated)
16367.1 Da
IEP (calculated)
9.143
GRAVY (calculated)
-0.761
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: SSTTTHRSSS PPPPRRPPMK KVFSRFDTNG DGRISPSELA AASRAIAPPA TELAGGRKVA SMMDELDTDR DGYVDLGKFA AFHGRGHGER ELDAELRDAF
101: YIYDINDDGR ISDAELSKVL SRIGEGCSAR PRTQRRPWPP IASRVAADGR
101: YIYDINDDGR ISDAELSKVL SRIGEGCSAR PRTQRRPWPP IASRVAADGR
001: MASANPETAK PTPATVDMAN PEELKKVFDQ FDSNGDGKIS VLELGGVFKA MGTSYTETEL NRVLEEVDTD RDGYINLDEF STLCRSSSSA AEIRDAFDLY
101: DQDKNGLISA SELHQVLNRL GMSCSVEDCT RMIGPVDADG DGNVNFEEFQ KMMTSSSLLN SNGSAAPPST
101: DQDKNGLISA SELHQVLNRL GMSCSVEDCT RMIGPVDADG DGNVNFEEFQ KMMTSSSLLN SNGSAAPPST
Arabidopsis Description
CML27Probable calcium-binding protein CML27 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE22]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.