Factsheet for Bra016564.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96729	Canola	cytosol	96.55	96.55
AT1G18210.1	Thale cress	cytosol	84.48	86.47
Bra025924.1-P	Field mustard	cytosol	82.18	85.63
Bra015979.1-P	Field mustard	cytosol	63.22	69.18
KRH41828	Soybean	cytosol	55.17	53.33
PGSC0003DMT400074098	Potato	cytosol	46.55	52.6
Solyc06g068960.1.1	Tomato	endoplasmic reticulum, unclear	46.55	52.6
PGSC0003DMT400014742	Potato	cytosol	47.7	50.61
KRH24162	Soybean	cytosol	40.23	50.0
KRH48613	Soybean	cytosol	51.15	49.72
Solyc03g118810.1.1	Tomato	cytosol	45.98	48.78
KRH02767	Soybean	cytosol	41.95	48.03
KRH15405	Soybean	cytosol	39.08	47.22
Bra004165.1-P	Field mustard	cytosol	39.08	44.44
TraesCS1A01G134000.1	Wheat	cytosol	43.68	44.19
TraesCS1B01G148000.1	Wheat	cytosol	43.1	43.6
TraesCS1D01G125800.1	Wheat	cytosol	43.1	43.6
KRH60530	Soybean	plastid	51.72	41.67
EES19251	Sorghum	cytosol	42.53	41.34
KRH16247	Soybean	cytosol	31.03	41.22
Bra032785.1-P	Field mustard	cytosol	29.89	40.62
Bra025439.1-P	Field mustard	cytosol	36.78	40.0
Bra040379.1-P	Field mustard	cytosol	33.91	39.6
GSMUA_Achr8P17950_001	Banana	cytosol, plastid	40.23	39.55
GSMUA_Achr11P...	Banana	cytosol, plastid	39.08	39.53
Os05t0223000-01	Rice	plasma membrane	41.95	38.62
Bra012497.1-P	Field mustard	cytosol	39.66	37.5
Bra010974.1-P	Field mustard	cytosol	40.23	37.43
Bra016936.1-P	Field mustard	cytosol	22.41	37.14
Bra034907.1-P	Field mustard	cytosol	32.18	36.84
Bra032677.1-P	Field mustard	cytosol	32.18	36.84
Bra001254.1-P	Field mustard	cytosol	32.18	36.6
Os01t0135700-01	Rice	plasma membrane	37.36	35.91
TraesCS3B01G045500.1	Wheat	cytosol	37.93	35.29
Bra035972.1-P	Field mustard	cytosol	22.41	35.14
TraesCS3D01G041500.1	Wheat	cytosol	36.78	34.59
HORVU4Hr1G081250.1	Barley	cytosol	12.07	34.43
Bra000836.1-P	Field mustard	cytosol	30.46	34.42
HORVU3Hr1G007420.1	Barley	cytosol	36.78	34.41
TraesCS3A01G038300.1	Wheat	cytosol	36.78	34.41
Bra037722.1-P	Field mustard	cytosol	33.33	34.32
Bra034870.1-P	Field mustard	cytosol	33.33	34.32
Bra019554.1-P	Field mustard	cytosol	33.33	34.32
Bra039845.1-P	Field mustard	plastid	35.06	32.28
EES00360	Sorghum	cytosol	37.93	32.04
HORVU1Hr1G029850.1	Barley	cytosol	41.95	32.02
Zm00001d008573_P001	Maize	plastid	36.21	30.73
GSMUA_Achr6P09820_001	Banana	cytosol	45.4	30.27
Zm00001d039944_P001	Maize	cytosol, plastid	33.91	30.26
Bra003376.1-P	Field mustard	vacuole	34.48	29.56
Bra007450.1-P	Field mustard	endoplasmic reticulum, vacuole	33.33	29.29
HORVU6Hr1G076690.1	Barley	cytosol	24.14	28.0
HORVU1Hr1G074240.1	Barley	cytosol, plastid	24.14	28.0
HORVU7Hr1G101640.1	Barley	cytosol, plastid	24.14	27.63
Bra033745.1-P	Field mustard	cytosol	28.74	27.47
TraesCS3D01G041400.1	Wheat	cytosol, plastid	37.36	27.31
Bra039511.1-P	Field mustard	cytosol	28.16	26.92
HORVU7Hr1G029640.1	Barley	cytosol, plastid	24.14	26.75
HORVU5Hr1G018360.1	Barley	cytosol, plastid	22.99	26.49
HORVU6Hr1G034200.1	Barley	cytosol, plastid	24.14	26.42
HORVU1Hr1G023720.1	Barley	cytosol, plastid	24.14	26.25
Bra020916.1-P	Field mustard	cytosol, plastid	27.59	26.09
HORVU4Hr1G032570.1	Barley	cytosol, plastid	22.41	26.0
HORVU0Hr1G031990.1	Barley	cytosol, plastid	23.56	25.95
Bra013470.1-P	Field mustard	cytosol	27.59	25.53
HORVU4Hr1G085560.1	Barley	cytosol, plastid	25.86	25.42
Bra029821.1-P	Field mustard	plastid	29.89	25.0
Bra004620.1-P	Field mustard	cytosol, mitochondrion, plastid	30.46	24.88
HORVU5Hr1G117570.1	Barley	cytosol	17.24	23.08
HORVU5Hr1G077930.1	Barley	cytosol	18.97	22.15
Bra038801.1-P	Field mustard	cytosol	28.16	18.77
HORVU5Hr1G073590.1	Barley	cytosol, plastid	17.24	16.48

Protein Annotations

EnsemblPlants:Bra016564.1	EnsemblPlants:Bra016564.1-P	EnsemblPlantsGene:Bra016564	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR10891
PANTHER:PTHR10891:SF698	PFAM:PF13499	PFscan:PS50222	ScanProsite:PS00018	SEG:seg	SMART:SM00054
SUPFAM:SSF47473	UniParc:UPI00025470FD	UniProt:M4DJ86	MapMan:35.1	:	:

Description

AT1G18210 (E=5e-077) | calcium-binding protein, putative

Coordinates

chrA08:+:19081043..19081567

Molecular Weight (calculated)

18617.2 Da

IEP (calculated)

4.009

GRAVY (calculated)

-0.511

Length

174 amino acids

Sequence
(BLAST)

001: MASTNHETAK ATPSSVDMAN PEELKKVFDQ FDSNGDGKIS VAELGGVLKA MGTSYSETEL NRVLEDVDAD RDGYINVDEF STLCRSSSTA AEIRDAFDLY
101: DQDKNGLISA SELHQVLNRL GMSCSAEECT RMIGPVDADG DGNVNFEEFQ KMMTSSSLTN SNNGSTAAAN SSST

Best Arabidopsis Sequence Match ( AT1G18210.2 )
(BLAST)

001: MASANPETAK PTPATVDMAN PEELKKVFDQ FDSNGDGKIS VLELGGVFKA MGTSYTETEL NRVLEEVDTD RDGYINLDEF STLCRSSSSA AEIRDAFDLY
101: DQDKNGLISA SELHQVLNRL GMSCSVEDCT RMIGPVDADG DGNVNFEEFQ KMMTSSSLLN SNGSAAPPST

Arabidopsis Description

CML27Probable calcium-binding protein CML27 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE22]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.