Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 3
- plasma membrane 1
- vacuole 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS1D01G125800.1 | Wheat | cytosol | 74.6 | 81.98 |
TraesCS1B01G148000.1 | Wheat | cytosol | 74.6 | 81.98 |
TraesCS1A01G134000.1 | Wheat | cytosol | 74.6 | 81.98 |
EES19251 | Sorghum | cytosol | 73.55 | 77.65 |
HORVU1Hr1G029850.1 | Barley | cytosol | 73.55 | 60.96 |
GSMUA_Achr8P17950_001 | Banana | cytosol, plastid | 51.32 | 54.8 |
Solyc06g068960.1.1 | Tomato | endoplasmic reticulum, unclear | 42.33 | 51.95 |
PGSC0003DMT400074098 | Potato | cytosol | 41.8 | 51.3 |
Solyc03g118810.1.1 | Tomato | cytosol | 43.92 | 50.61 |
KRH48613 | Soybean | cytosol | 47.62 | 50.28 |
PGSC0003DMT400014742 | Potato | cytosol | 43.39 | 50.0 |
KRH24162 | Soybean | cytosol | 34.92 | 47.14 |
Bra025924.1-P | Field mustard | cytosol | 40.21 | 45.51 |
CDY70127 | Canola | cytosol | 40.21 | 45.51 |
GSMUA_Achr11P... | Banana | cytosol, plastid | 41.27 | 45.35 |
CDX96488 | Canola | cytosol | 38.1 | 45.28 |
CDX72996 | Canola | cytosol | 38.1 | 45.28 |
Bra015979.1-P | Field mustard | cytosol | 38.1 | 45.28 |
KRH02767 | Soybean | cytosol | 35.98 | 44.74 |
AT1G18210.1 | Thale cress | cytosol | 40.21 | 44.71 |
KRH16247 | Soybean | cytosol | 30.69 | 44.27 |
KRH41828 | Soybean | cytosol | 41.8 | 43.89 |
KRH15405 | Soybean | cytosol | 33.33 | 43.75 |
Os01t0135700-01 | Rice | plasma membrane | 41.8 | 43.65 |
AT1G73630.1 | Thale cress | cytosol | 37.57 | 43.56 |
CDY19196 | Canola | cytosol | 40.21 | 42.94 |
Bra016564.1-P | Field mustard | cytosol | 38.62 | 41.95 |
CDX83860 | Canola | cytosol | 38.62 | 41.24 |
CDX96729 | Canola | cytosol | 37.57 | 40.8 |
Os01t0949500-01 | Rice | plasma membrane | 39.15 | 40.0 |
Os05t0380900-01 | Rice | cytosol, mitochondrion | 40.21 | 37.81 |
GSMUA_Achr6P09820_001 | Banana | cytosol | 51.85 | 37.55 |
KRH60530 | Soybean | plastid | 41.8 | 36.57 |
Os12t0228800-01 | Rice | cytosol | 32.28 | 36.31 |
Os04t0492800-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 34.39 | 33.16 |
Os11t0141400-01 | Rice | cytosol | 29.63 | 29.79 |
Os03t0331700-02 | Rice | plasma membrane | 29.1 | 28.95 |
Os08t0144100-01 | Rice | plasma membrane | 29.1 | 28.06 |
Os07t0681400-01 | Rice | cytosol | 29.1 | 27.92 |
Os09t0458700-01 | Rice | cytosol, mitochondrion | 26.98 | 27.57 |
Os05t0312600-01 | Rice | cytosol, plastid | 27.51 | 26.4 |
Os06t0172200-02 | Rice | plasma membrane | 32.28 | 25.85 |
Os12t0138050-00 | Rice | plastid | 31.75 | 25.21 |
Os01t0949300-01 | Rice | plasma membrane | 25.4 | 23.53 |
Protein Annotations
Gene3D:1.10.238.10 | MapMan:35.1 | EntrezGene:9266860 | UniProt:B9FJ38 | ProteinID:BAS92875.1 | ProteinID:EEE62792.1 |
InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
GO:GO:0046872 | InterPro:IPR002048 | EnsemblPlantsGene:Os05g0223000 | EnsemblPlants:Os05t0223000-01 | PFAM:PF13499 | ScanProsite:PS00018 |
PFscan:PS50222 | PANTHER:PTHR10891 | PANTHER:PTHR10891:SF698 | SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI0000F18F0B |
RefSeq:XP_015637715.1 | SEG:seg | : | : | : | : |
Description
CALMODULIN-LIKE PROTEIN 18Similar to TCH2 (TOUCH 2); calcium ion binding. (Os05t0223000-01)
Coordinates
chr5:-:7533744..7534582
Molecular Weight (calculated)
19559.9 Da
IEP (calculated)
4.827
GRAVY (calculated)
-0.546
Length
189 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGRGGGGG VASPTPAKVE GGGGGGGGGP GMPMAELEQV FRRYDANGDG KISAEELASV LRALGAPLGP GEVRRMMDEM DSDRDGFVDL SEFAAFHCGP
101: TPAHGGKGGD AKDQEAASEA ELREAFRMYD ADSNGKISAR ELHRVLRQLG DKCSVADCSR MIRSVDADGD GCVNFDEFKK MMGGGGGRR
101: TPAHGGKGGD AKDQEAASEA ELREAFRMYD ADSNGKISAR ELHRVLRQLG DKCSVADCSR MIRSVDADGD GCVNFDEFKK MMGGGGGRR
001: MSSKNGVVRS CLGSMDDIKK VFQRFDKNGD GKISVDELKE VIRALSPTAS PEETVTMMKQ FDLDGNGFID LDEFVALFQI GIGGGGNNRN DVSDLKEAFE
101: LYDLDGNGRI SAKELHSVMK NLGEKCSVQD CKKMISKVDI DGDGCVNFDE FKKMMSNGGG A
101: LYDLDGNGRI SAKELHSVMK NLGEKCSVQD CKKMISKVDI DGDGCVNFDE FKKMMSNGGG A
Arabidopsis Description
CML24TCH2 [Source:UniProtKB/TrEMBL;Acc:A0A178UBB8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.