CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plasma membrane 1
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015979.1-P	Field mustard	cytosol	100.0	100.0
CDX96488	Canola	cytosol	100.0	100.0
AT1G73630.1	Thale cress	cytosol	84.91	82.82
CDY70127	Canola	cytosol	71.07	67.66
CDY19196	Canola	cytosol	71.7	64.41
CDX83860	Canola	cytosol	71.07	63.84
CDX96729	Canola	cytosol	69.81	63.79
KRH41828	Soybean	cytosol	57.23	50.56
KRH24162	Soybean	cytosol	44.03	50.0
PGSC0003DMT400074098	Potato	cytosol	46.54	48.05
PGSC0003DMT400014742	Potato	cytosol	49.06	47.56
Solyc06g068960.1.1	Tomato	endoplasmic reticulum, unclear	45.91	47.4
KRH48613	Soybean	cytosol	52.2	46.37
Solyc03g118810.1.1	Tomato	cytosol	47.8	46.34
KRH02767	Soybean	cytosol	42.14	44.08
CDY55679	Canola	cytosol	42.14	43.79
KRH15405	Soybean	cytosol	39.62	43.75
CDX96150	Canola	cytosol	41.51	43.14
KRH16247	Soybean	cytosol	35.22	42.75
TraesCS1A01G134000.1	Wheat	cytosol	45.91	42.44
CDX99691	Canola	cytosol	42.14	42.41
CDY27652	Canola	cytosol	42.14	42.14
TraesCS1B01G148000.1	Wheat	cytosol	45.28	41.86
TraesCS1D01G125800.1	Wheat	cytosol	45.28	41.86
EES19251	Sorghum	cytosol	45.28	40.22
KRH60530	Soybean	plastid	53.46	39.35
CDY60818	Canola	cytosol	36.48	38.93
CDY39714	Canola	cytosol	36.48	38.16
CDY33702	Canola	cytosol	36.48	38.16
Os05t0223000-01	Rice	plasma membrane	45.28	38.1
GSMUA_Achr8P17950_001	Banana	cytosol, plastid	42.14	37.85
CDY21953	Canola	cytosol	35.85	37.5
CDY22119	Canola	cytosol	35.22	36.84
TraesCS3D01G041500.1	Wheat	cytosol	42.14	36.22
HORVU4Hr1G081250.1	Barley	cytosol	13.84	36.07
HORVU3Hr1G007420.1	Barley	cytosol	42.14	36.02
TraesCS3A01G038300.1	Wheat	cytosol	42.14	36.02
CDY07993	Canola	cytosol	34.59	35.95
CDX74043	Canola	cytosol	34.59	35.95
TraesCS3B01G045500.1	Wheat	cytosol	42.14	35.83
GSMUA_Achr11P...	Banana	cytosol, plastid	38.36	35.47
Os01t0135700-01	Rice	plasma membrane	40.25	35.36
CDY63788	Canola	cytosol	33.33	35.1
CDX86544	Canola	cytosol	33.33	35.1
CDX90890	Canola	cytosol	33.33	34.42
CDY03874	Canola	cytosol	39.62	34.24
CDY40786	Canola	cytosol	39.62	34.24
CDY36129	Canola	cytosol	39.62	33.69
CDX84967	Canola	cytosol	38.99	32.8
CDY27574	Canola	cytosol	38.99	32.46
EES00360	Sorghum	cytosol	41.51	32.04
HORVU1Hr1G029850.1	Barley	cytosol	44.65	31.14
CDY17950	Canola	cytosol	31.45	30.12
HORVU1Hr1G074240.1	Barley	cytosol, plastid	28.3	30.0
HORVU6Hr1G076690.1	Barley	cytosol	28.3	30.0
Zm00001d039944_P001	Maize	cytosol, plastid	36.48	29.74
CDY37233	Canola	plastid	35.22	29.63
HORVU7Hr1G101640.1	Barley	cytosol, plastid	28.3	29.61
Zm00001d008573_P001	Maize	plastid	37.74	29.27
CDY66855	Canola	plastid	34.59	29.1
HORVU6Hr1G034200.1	Barley	cytosol, plastid	28.93	28.93
GSMUA_Achr6P09820_001	Banana	cytosol	47.17	28.74
HORVU5Hr1G018360.1	Barley	cytosol, plastid	27.04	28.48
HORVU7Hr1G029640.1	Barley	cytosol, plastid	27.67	28.03
TraesCS3D01G041400.1	Wheat	cytosol, plastid	41.51	27.73
HORVU1Hr1G023720.1	Barley	cytosol, plastid	27.67	27.5
HORVU0Hr1G031990.1	Barley	cytosol, plastid	27.04	27.22
HORVU4Hr1G085560.1	Barley	cytosol, plastid	30.19	27.12
HORVU4Hr1G032570.1	Barley	cytosol, plastid	25.16	26.67
CDX76451	Canola	cytosol, plastid	30.82	26.63
CDY31433	Canola	cytosol, plastid	30.82	26.63
CDY49013	Canola	cytosol	30.19	26.37
CDX67796	Canola	vacuole	33.33	26.11
CDY72611	Canola	extracellular, vacuole	32.7	26.0
CDX94789	Canola	cytosol	29.56	25.82
CDY06002	Canola	extracellular, vacuole	32.08	25.76
HORVU5Hr1G077930.1	Barley	cytosol	23.9	25.5
CDX98375	Canola	endoplasmic reticulum	32.7	25.49
CDY14927	Canola	cytosol	28.93	25.27
CDY30399	Canola	extracellular	33.33	25.24
CDX83488	Canola	extracellular	33.96	25.23
CDY23356	Canola	vacuole	33.33	25.12
CDX94006	Canola	cytosol	28.93	24.73
HORVU5Hr1G117570.1	Barley	cytosol	20.13	24.62
CDX82773	Canola	cytosol	29.56	24.61
CDY23852	Canola	cytosol, mitochondrion, plastid	32.7	24.41
CDY00910	Canola	cytosol, plastid	33.33	24.31
CDX79002	Canola	cytosol	28.3	23.94
CDX96968	Canola	cytosol	28.93	23.83
CDY60169	Canola	cytosol, plastid	30.82	23.56
CDX79938	Canola	cytosol, mitochondrion, plastid	31.45	23.47
CDY24421	Canola	endoplasmic reticulum, golgi	39.62	23.25
CDY06925	Canola	cytosol, mitochondrion, plastid	30.82	22.58
CDY14768	Canola	cytosol, mitochondrion, plastid	29.56	21.66
CDY44217	Canola	endoplasmic reticulum, golgi	32.7	18.44
HORVU5Hr1G073590.1	Barley	cytosol, plastid	20.75	18.13
CDX98672	Canola	cytosol	28.3	17.72

Protein Annotations

EnsemblPlants:CDX72996	EnsemblPlantsGene:GSBRNA2T00103434001	Gene3D:1.10.238.10	GO:A0A078C7C0	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR10891
PANTHER:PTHR10891:SF698	PFAM:PF13499	PFscan:PS50222	ProteinID:CDX72996	ProteinID:CDX72996.1	ScanProsite:PS00018
SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI0002541D3F	MapMan:35.1	:	:

Description

BnaC06g34440D

Coordinates

chrLK031797:+:1579675..1580528

Molecular Weight (calculated)

17602.5 Da

IEP (calculated)

4.163

GRAVY (calculated)

-0.542

Length

159 amino acids

Sequence
(BLAST)

001: MASENPETTN KPSSTDMDLK KVFNQFDANG DGKISVSELG NVFKSMGTSY TEAELNQVLD DIDIDRDGFI NMEEFAAICR SSSSATEVRE AFDLYDQNKN
101: GLISSSEIHK VLNRLGMTCS VEDCVRMIGR VDTDGDGNVN FEEFKKMMSS PELLNKQSA

Best Arabidopsis Sequence Match ( AT1G73630.1 )
(BLAST)

001: MANTNLESTN KSTTPSTDME LKKVFDKFDA NGDGKISVSE LGNVFKSMGT SYTEEELNRV LDEIDIDCDG FINQEEFATI CRSSSSAVEI REAFDLYDQN
101: KNGLISSSEI HKVLNRLGMT CSVEDCVRMI GHVDTDGDGN VNFEEFQKMM SSPELVKGTV ANS

Arabidopsis Description

CML26Probable calcium-binding protein CML26 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9U8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.