Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 2
- plastid 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0135700-01 | Rice | plasma membrane | 65.13 | 70.17 |
| EES00360 | Sorghum | cytosol | 73.33 | 69.42 |
| Zm00001d008573_P001 | Maize | plastid | 70.77 | 67.32 |
| HORVU4Hr1G081250.1 | Barley | cytosol | 20.0 | 63.93 |
| TraesCS3B01G045500.1 | Wheat | cytosol | 58.46 | 60.96 |
| TraesCS3A01G038300.1 | Wheat | cytosol | 57.95 | 60.75 |
| TraesCS3D01G041500.1 | Wheat | cytosol | 56.92 | 60.0 |
| HORVU3Hr1G007420.1 | Barley | cytosol | 53.85 | 56.45 |
| HORVU6Hr1G076690.1 | Barley | cytosol | 42.56 | 55.33 |
| HORVU5Hr1G018360.1 | Barley | cytosol, plastid | 42.05 | 54.3 |
| HORVU7Hr1G101640.1 | Barley | cytosol, plastid | 42.05 | 53.95 |
| HORVU1Hr1G074240.1 | Barley | cytosol, plastid | 40.51 | 52.67 |
| HORVU7Hr1G029640.1 | Barley | cytosol, plastid | 42.05 | 52.23 |
| HORVU1Hr1G023720.1 | Barley | cytosol, plastid | 42.56 | 51.88 |
| HORVU6Hr1G034200.1 | Barley | cytosol, plastid | 41.54 | 50.94 |
| HORVU0Hr1G031990.1 | Barley | cytosol, plastid | 40.51 | 50.0 |
| HORVU4Hr1G032570.1 | Barley | cytosol, plastid | 38.46 | 50.0 |
| HORVU5Hr1G077930.1 | Barley | cytosol | 37.44 | 48.99 |
| HORVU5Hr1G117570.1 | Barley | cytosol | 32.31 | 48.46 |
| TraesCS3D01G041400.1 | Wheat | cytosol, plastid | 58.46 | 47.9 |
| HORVU4Hr1G085560.1 | Barley | cytosol, plastid | 41.54 | 45.76 |
| Solyc06g068960.1.1 | Tomato | endoplasmic reticulum, unclear | 33.33 | 42.21 |
| PGSC0003DMT400014742 | Potato | cytosol | 35.38 | 42.07 |
| PGSC0003DMT400074098 | Potato | cytosol | 32.82 | 41.56 |
| Solyc03g118810.1.1 | Tomato | cytosol | 34.36 | 40.85 |
| KRH24162 | Soybean | cytosol | 27.69 | 38.57 |
| KRH48613 | Soybean | cytosol | 34.36 | 37.43 |
| HORVU5Hr1G073590.1 | Barley | cytosol, plastid | 34.87 | 37.36 |
| CDX96488 | Canola | cytosol | 29.74 | 36.48 |
| CDX72996 | Canola | cytosol | 29.74 | 36.48 |
| Bra015979.1-P | Field mustard | cytosol | 29.74 | 36.48 |
| CDY70127 | Canola | cytosol | 30.77 | 35.93 |
| Bra025924.1-P | Field mustard | cytosol | 30.77 | 35.93 |
| Zm00001d042107_P001 | Maize | mitochondrion | 35.38 | 35.57 |
| KRH41828 | Soybean | cytosol | 32.82 | 35.56 |
| KRH15405 | Soybean | cytosol | 26.15 | 35.42 |
| CDX83860 | Canola | cytosol | 31.28 | 34.46 |
| AT1G73630.1 | Thale cress | cytosol | 28.72 | 34.36 |
| KRH02767 | Soybean | cytosol | 26.67 | 34.21 |
| AT1G18210.1 | Thale cress | cytosol | 29.74 | 34.12 |
| Bra016564.1-P | Field mustard | cytosol | 30.26 | 33.91 |
| CDY19196 | Canola | cytosol | 30.77 | 33.9 |
| CDX96729 | Canola | cytosol | 29.23 | 32.76 |
| Zm00001d009985_P001 | Maize | cytosol, mitochondrion, plastid | 31.28 | 32.28 |
| Zm00001d023992_P001 | Maize | cytosol | 26.15 | 32.08 |
| KRH16247 | Soybean | cytosol | 20.0 | 29.77 |
| Zm00001d038061_P001 | Maize | mitochondrion | 30.77 | 29.41 |
| KRH60530 | Soybean | plastid | 32.31 | 29.17 |
| Zm00001d003197_P001 | Maize | plastid | 30.77 | 27.03 |
| Zm00001d022430_P001 | Maize | cytosol, plastid | 26.67 | 26.0 |
| Zm00001d007181_P001 | Maize | plastid | 26.67 | 25.62 |
| Zm00001d020722_P001 | Maize | cytosol, mitochondrion | 23.59 | 25.0 |
| Zm00001d029028_P001 | Maize | plastid | 23.59 | 24.47 |
| Zm00001d047535_P001 | Maize | plastid | 22.56 | 23.53 |
| Zm00001d042108_P001 | Maize | cytosol, plastid | 23.08 | 23.44 |
| Zm00001d004972_P001 | Maize | plastid | 22.05 | 22.99 |
| Zm00001d037477_P001 | Maize | endoplasmic reticulum, vacuole | 28.21 | 22.63 |
Protein Annotations
| Gene3D:1.10.238.10 | EntrezGene:103649813 | MapMan:35.1 | UniProt:A0A1D6MLW6 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS |
| InterPro:EF_hand_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | InterPro:IPR002048 | ProteinID:ONM30204.1 |
| PFAM:PF13499 | ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR10891 | PANTHER:PTHR10891:SF676 | SMART:SM00054 |
| SUPFAM:SSF47473 | UniParc:UPI00022120AF | EnsemblPlantsGene:Zm00001d039944 | EnsemblPlants:Zm00001d039944_P001 | EnsemblPlants:Zm00001d039944_T001 | SEG:seg |
Description
Probable calcium-binding protein CML27
Coordinates
chr3:+:20126203..20126790
Molecular Weight (calculated)
20494.5 Da
IEP (calculated)
4.228
GRAVY (calculated)
-0.546
Length
195 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTSMSNSAA SEKQSQQAGH RQRPPAASAA DAEMQRVFCR IDADGDGRIS ASELAAVTRA ISPPASSSHG RREVAAMMDE LDTDRDGFVD LGEFRAFHAR
101: GGGGVDDDAE LRAAFDVYDV DGDGRVTAAE LGKVLARIGE GGCSAEECER MVAGVDADGC VGFEDFKKMM CPQPQAEAGA AGRDKAEAEA EDKEE
101: GGGGVDDDAE LRAAFDVYDV DGDGRVTAAE LGKVLARIGE GGCSAEECER MVAGVDADGC VGFEDFKKMM CPQPQAEAGA AGRDKAEAEA EDKEE
001: MSSKNGVVRS CLGSMDDIKK VFQRFDKNGD GKISVDELKE VIRALSPTAS PEETVTMMKQ FDLDGNGFID LDEFVALFQI GIGGGGNNRN DVSDLKEAFE
101: LYDLDGNGRI SAKELHSVMK NLGEKCSVQD CKKMISKVDI DGDGCVNFDE FKKMMSNGGG A
101: LYDLDGNGRI SAKELHSVMK NLGEKCSVQD CKKMISKVDI DGDGCVNFDE FKKMMSNGGG A
Arabidopsis Description
CML24TCH2 [Source:UniProtKB/TrEMBL;Acc:A0A178UBB8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.