Factsheet for Zm00001d042107_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04217	Sorghum	cytosol, mitochondrion, plastid	88.14	90.48
Os01t0949500-01	Rice	plasma membrane	77.84	81.62
HORVU3Hr1G107090.2	Barley	cytosol, plastid	76.8	78.01
TraesCS3B01G538300.1	Wheat	cytosol, plastid	74.23	75.79
TraesCS3D01G483200.1	Wheat	cytosol, plastid	74.23	75.39
TraesCS3B01G536200.1	Wheat	cytosol, plastid	73.71	75.26
TraesCS3D01G484900.1	Wheat	cytosol, mitochondrion	71.65	74.73
TraesCS3A01G488400.1	Wheat	cytosol, plastid	72.16	73.3
Zm00001d009985_P001	Maize	cytosol, mitochondrion, plastid	65.46	67.2
Zm00001d038061_P001	Maize	mitochondrion	66.49	63.24
KRH75577	Soybean	cytosol	38.14	48.68
PGSC0003DMT400025178	Potato	cytosol	42.27	47.13
Solyc01g005370.2.1	Tomato	cytosol	41.75	47.09
KRH60410	Soybean	cytosol, plastid	44.33	45.74
Solyc04g008000.2.1	Tomato	cytosol, plastid	42.78	43.46
KRH49632	Soybean	cytosol, mitochondrion, plastid	40.72	43.41
PGSC0003DMT400075801	Potato	plastid	42.78	42.78
Bra032785.1-P	Field mustard	cytosol	27.84	42.19
CDY40786	Canola	cytosol	39.18	41.3
CDY03874	Canola	cytosol	39.18	41.3
Zm00001d023992_P001	Maize	cytosol	33.51	40.88
Bra012497.1-P	Field mustard	cytosol	38.66	40.76
KRH37459	Soybean	cytosol	21.13	40.2
AT1G24620.1	Thale cress	cytosol	38.14	39.78
Zm00001d008573_P001	Maize	plastid	40.21	38.05
Bra010974.1-P	Field mustard	cytosol	36.6	37.97
CDY36129	Canola	cytosol	36.6	37.97
CDX84967	Canola	cytosol	36.6	37.57
CDY27574	Canola	cytosol	36.6	37.17
Zm00001d039944_P001	Maize	cytosol, plastid	35.57	35.38
Zm00001d003197_P001	Maize	plastid	38.14	33.33
Zm00001d047535_P001	Maize	plastid	31.44	32.62
Zm00001d029028_P001	Maize	plastid	30.93	31.91
Zm00001d022430_P001	Maize	cytosol, plastid	32.47	31.5
Zm00001d020722_P001	Maize	cytosol, mitochondrion	28.87	30.43
Zm00001d007181_P001	Maize	plastid	31.44	30.05
Zm00001d042108_P001	Maize	cytosol, plastid	28.87	29.17
Zm00001d004972_P001	Maize	plastid	26.8	27.81
Zm00001d037477_P001	Maize	endoplasmic reticulum, vacuole	34.54	27.57
CDY24421	Canola	endoplasmic reticulum, golgi	36.6	26.2

Protein Annotations

EnsemblPlants:Zm00001d042107_P001	EnsemblPlants:Zm00001d042107_T001	EnsemblPlantsGene:Zm00001d042107	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR10891
PANTHER:PTHR10891:SF581	PFAM:PF13499	PFscan:PS50222	ProteinID:ONM34555.1	ScanProsite:PS00018	SEG:seg
SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI0008451C52	UniProt:A0A1D6N1F7	MapMan:35.1	:

Description

Polcalcin Jun o 2

Coordinates

chr3:+:150853652..150855137

Molecular Weight (calculated)

20445.0 Da

IEP (calculated)

4.545

GRAVY (calculated)

-0.287

Length

194 amino acids

Sequence
(BLAST)

001: MGKIRMPVPS LFRRRSSKPP PPQPQQQAPA AGDGDGSGSP ERATAEEEMA RVFRKFDANG DGRISRSELA ALFESLGHGA SDDEVARMMA EADADGDGFI
101: SLPEFAALNA TVAGDAAAVE EDLRHAFRVF DADGSGAISA AELARVLRSL GEPASVAQCR RMIEGVDQNG DGLISFDEFK VMMARGGACF AKIA

Best Arabidopsis Sequence Match ( AT1G24620.1 )
(BLAST)

001: MFNKNQGSNG GSSSNVGIGA DSPYLQKARS GKTEIRELEA VFKKFDVNGD GKISSKELGA IMTSLGHEVP EEELEKAITE IDRKGDGYIN FEEFVELNTK
101: GMDQNDVLEN LKDAFSVYDI DGNGSISAEE LHEVLRSLGD ECSIAECRKM IGGVDKDGDG TIDFEEFKIM MTMGSRRDNV MGGGPR

Arabidopsis Description

CML25Probable calcium-binding protein CML25 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYK2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.