CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 3
vacuole 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042107_P001	Maize	mitochondrion	90.48	88.14
Os01t0949500-01	Rice	plasma membrane	85.19	87.03
HORVU3Hr1G107090.2	Barley	cytosol, plastid	77.78	76.96
TraesCS3B01G538300.1	Wheat	cytosol, plastid	75.66	75.26
TraesCS3B01G536200.1	Wheat	cytosol, plastid	75.13	74.74
TraesCS3D01G483200.1	Wheat	cytosol, plastid	75.13	74.35
TraesCS3D01G484900.1	Wheat	cytosol, mitochondrion	72.49	73.66
TraesCS3A01G488400.1	Wheat	cytosol, plastid	73.55	72.77
EES19444	Sorghum	plastid	66.14	62.81
KRH75577	Soybean	cytosol	40.21	50.0
PGSC0003DMT400025178	Potato	cytosol	43.92	47.7
Solyc01g005370.2.1	Tomato	cytosol	43.39	47.67
KRH60410	Soybean	cytosol, plastid	45.5	45.74
Solyc04g008000.2.1	Tomato	cytosol, plastid	44.44	43.98
KRH49632	Soybean	cytosol, mitochondrion, plastid	41.8	43.41
PGSC0003DMT400075801	Potato	plastid	44.44	43.3
Bra032785.1-P	Field mustard	cytosol	29.1	42.97
EES19251	Sorghum	cytosol	40.21	42.46
CDY40786	Canola	cytosol	40.74	41.85
CDY03874	Canola	cytosol	40.74	41.85
Bra012497.1-P	Field mustard	cytosol	40.21	41.3
AT1G24620.1	Thale cress	cytosol	40.21	40.86
KRH37459	Soybean	cytosol	21.69	40.2
Bra010974.1-P	Field mustard	cytosol	38.62	39.04
CDY36129	Canola	cytosol	38.62	39.04
CDX84967	Canola	cytosol	38.62	38.62
CDY27574	Canola	cytosol	38.62	38.22
EES00360	Sorghum	cytosol	40.21	36.89
OQU78964	Sorghum	cytosol	31.22	35.76
EER96860	Sorghum	cytosol, mitochondrion	31.22	32.07
EER92319	Sorghum	cytosol	31.75	31.91
KXG39446	Sorghum	plastid	31.75	31.41
EER97743	Sorghum	plastid	31.75	30.15
EES11048	Sorghum	plastid	37.57	29.83
EER87935	Sorghum	endoplasmic reticulum, vacuole	37.57	28.98
EES02048	Sorghum	plastid	29.1	28.8
CDY24421	Canola	endoplasmic reticulum, golgi	38.62	26.94
KXG27695	Sorghum	plastid	28.04	26.9
EES16521	Sorghum	plastid	29.1	25.7

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	EntrezGene:8062320	UniProt:C5XHV0	EnsemblPlants:EES04217	ProteinID:EES04217
ProteinID:EES04217.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:IPR002048	PFAM:PF13499	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR10891
PANTHER:PTHR10891:SF581	SMART:SM00054	EnsemblPlantsGene:SORBI_3003G425500	SUPFAM:SSF47473	UniParc:UPI0001A85731	RefSeq:XP_002459097.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:72980917..72983900

Molecular Weight (calculated)

19967.5 Da

IEP (calculated)

4.621

GRAVY (calculated)

-0.256

Length

189 amino acids

Sequence
(BLAST)

001: MGKIRMPVPS LFRRRSKSPP PQQQPAAEGK GTGSPPRAAT AEEEMARVFR KFDANGDGRI SRSELAALFE SLGHAASDDE VARMMAEADA DGDGFISLDE
101: FAALNATVAG DAAAVEEDLR HAFRVFDADG NGTISAAELA RVLRGLGESA SVAQCRRMIE GVDQNGDGLI SFEEFKVMMA GGGCFAKIA

Best Arabidopsis Sequence Match ( AT1G24620.1 )
(BLAST)

001: MFNKNQGSNG GSSSNVGIGA DSPYLQKARS GKTEIRELEA VFKKFDVNGD GKISSKELGA IMTSLGHEVP EEELEKAITE IDRKGDGYIN FEEFVELNTK
101: GMDQNDVLEN LKDAFSVYDI DGNGSISAEE LHEVLRSLGD ECSIAECRKM IGGVDKDGDG TIDFEEFKIM MTMGSRRDNV MGGGPR

Arabidopsis Description

CML25Probable calcium-binding protein CML25 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYK2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.