Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 7
- plasma membrane 6
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d037477_P001 | Maize | endoplasmic reticulum, vacuole | 85.71 | 86.42 |
| TraesCS7D01G132700.1 | Wheat | endoplasmic reticulum | 67.35 | 71.43 |
| TraesCS7B01G034000.1 | Wheat | endoplasmic reticulum | 68.16 | 71.37 |
| Os06t0172200-02 | Rice | plasma membrane | 67.35 | 69.92 |
| HORVU7Hr1G027770.3 | Barley | endoplasmic reticulum | 60.82 | 65.07 |
| GSMUA_Achr6P35120_001 | Banana | endoplasmic reticulum | 43.27 | 48.85 |
| TraesCS7A01G133200.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 67.35 | 48.82 |
| OQU78964 | Sorghum | cytosol | 30.61 | 45.45 |
| PGSC0003DMT400086334 | Potato | cytosol | 28.98 | 40.11 |
| KRH20147 | Soybean | extracellular | 35.51 | 37.99 |
| EES04217 | Sorghum | cytosol, mitochondrion, plastid | 28.98 | 37.57 |
| KRH03663 | Soybean | endoplasmic reticulum, extracellular | 33.88 | 36.24 |
| Solyc07g007950.1.1 | Tomato | endoplasmic reticulum, extracellular, golgi | 32.65 | 36.04 |
| EES19251 | Sorghum | cytosol | 26.12 | 35.75 |
| EES11048 | Sorghum | plastid | 34.69 | 35.71 |
| PGSC0003DMT400079359 | Potato | extracellular, golgi | 32.65 | 34.19 |
| EER92319 | Sorghum | cytosol | 26.12 | 34.04 |
| EES19444 | Sorghum | plastid | 27.35 | 33.67 |
| EER96860 | Sorghum | cytosol, mitochondrion | 24.9 | 33.15 |
| VIT_11s0016g05740.t01 | Wine grape | extracellular, golgi | 34.29 | 32.81 |
| EER97743 | Sorghum | plastid | 25.31 | 31.16 |
| EES00360 | Sorghum | cytosol | 26.12 | 31.07 |
| KXG39446 | Sorghum | plastid | 24.08 | 30.89 |
| KXG27695 | Sorghum | plastid | 23.67 | 29.44 |
| EES16521 | Sorghum | plastid | 24.9 | 28.5 |
| EES02048 | Sorghum | plastid | 21.63 | 27.75 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | EntrezGene:8072578 | UniProt:C5Z5A3 | EnsemblPlants:EER87935 | ProteinID:EER87935 |
| ProteinID:EER87935.1 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | InterPro:IPR002048 | PFAM:PF13499 | ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR10891 |
| PANTHER:PTHR10891:SF703 | SMART:SM00054 | EnsemblPlantsGene:SORBI_3010G057000 | SUPFAM:SSF47473 | SignalP:SignalP-noTM | UniParc:UPI0001A89107 |
| RefSeq:XP_002436568.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:+:4450365..4451102
Molecular Weight (calculated)
26856.3 Da
IEP (calculated)
4.281
GRAVY (calculated)
-0.536
Length
245 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPLLLLFLL GSICALFSLT TSSRASGKKS DGKEPRCRDG CVPEETTQQQ QEEEEGKKKQ ARADPEKDLG IVFSTFDHDG DGFITAVELE ESLRRLGIAV
101: SADEAAAMVA RVDANSDGLI DIHEFRELYD SIPKKRKHQH PAADFSGAAR EVPVEGDDEE AEGEEEDEER DLREAFDVFD GNKDGLISAE ELGTVLGSLG
201: LRRQGNGRTA VADCRDMIRL VDSDGDGMVS FEEFKRMMTV VNVKA
101: SADEAAAMVA RVDANSDGLI DIHEFRELYD SIPKKRKHQH PAADFSGAAR EVPVEGDDEE AEGEEEDEER DLREAFDVFD GNKDGLISAE ELGTVLGSLG
201: LRRQGNGRTA VADCRDMIRL VDSDGDGMVS FEEFKRMMTV VNVKA
001: MDQAELARIF QMFDRNGDGK ITKQELNDSL ENLGIYIPDK DLVQMIEKID LNGDGYVDIE EFGGLYQTIM EERDEEEDMR EAFNVFDQNR DGFITVEELR
101: SVLASLGLKQ GRTLEDCKRM ISKVDVDGDG MVNFKEFKQM MKGGGFAALG SNL
101: SVLASLGLKQ GRTLEDCKRM ISKVDVDGDG MVNFKEFKQM MKGGGFAALG SNL
Arabidopsis Description
CML3CML3 [Source:UniProtKB/TrEMBL;Acc:A0A178V7U1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.