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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, cytosol

Predictor Summary:
  • plastid 1
  • mitochondrion 4
  • cytosol 2
  • plasma membrane 1
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d020722_P001 Maize cytosol, mitochondrion 86.41 86.41
HORVU5Hr1G068490.1 Barley cytosol 36.41 77.91
TraesCS5D01G246000.1 Wheat mitochondrion 77.17 77.6
TraesCS5B01G237500.1 Wheat mitochondrion 77.17 77.6
TraesCS5A01G238900.1 Wheat mitochondrion 76.63 77.05
Os09t0458700-01 Rice cytosol, mitochondrion 72.83 72.43
VIT_03s0063g00530.t01 Wine grape cytosol 44.57 45.05
KRH50269 Soybean mitochondrion 45.11 44.86
Solyc01g108190.2.1 Tomato plastid 42.93 42.7
KRH71148 Soybean cytosol 42.93 42.7
GSMUA_Achr9P27060_001 Banana plastid 45.65 42.64
Bra039845.1-P Field mustard plastid 42.39 41.27
CDY37233 Canola plastid 42.39 41.27
CDY66855 Canola plastid 42.39 41.27
PGSC0003DMT400066610 Potato plastid 41.3 41.08
AT2G15680.1 Thale cress plastid 41.3 40.64
KRH28478 Soybean cytosol, plastid 41.3 40.64
PGSC0003DMT400089961 Potato cytosol 37.5 39.88
KRH76994 Soybean cytosol, plastid 39.67 39.04
Solyc02g065000.1.1 Tomato cytosol 36.41 38.73
KRH57807 Soybean plastid 39.13 38.1
KRH04628 Soybean plastid 38.04 36.84
OQU78964 Sorghum cytosol 31.52 35.15
EES19251 Sorghum cytosol 30.98 31.84
EES04217 Sorghum cytosol, mitochondrion, plastid 32.07 31.22
EES19444 Sorghum plastid 29.89 27.64
EES00360 Sorghum cytosol 29.89 26.7
KXG39446 Sorghum plastid 26.63 25.65
KXG27695 Sorghum plastid 27.17 25.38
EER97743 Sorghum plastid 27.17 25.13
EER92319 Sorghum cytosol 25.54 25.0
EER87935 Sorghum endoplasmic reticulum, vacuole 33.15 24.9
EES02048 Sorghum plastid 25.54 24.61
EES16521 Sorghum plastid 28.26 24.3
EES11048 Sorghum plastid 30.98 23.95
Protein Annotations
Gene3D:1.10.238.10MapMan:35.1EntrezGene:8063706UniProt:C5X2C1EnsemblPlants:EER96860ProteinID:EER96860
ProteinID:EER96860.1InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domGO:GO:0003674GO:GO:0005488
GO:GO:0005509GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005739
InterPro:IPR002048PFAM:PF13499PFAM:PF13833ScanProsite:PS00018PFscan:PS50222PANTHER:PTHR10891
PANTHER:PTHR10891:SF620SMART:SM00054EnsemblPlantsGene:SORBI_3002G226300SUPFAM:SSF47473UniParc:UPI0001A83616RefSeq:XP_002460339.1
Description
hypothetical protein
Coordinates
chr2:+:61816211..61816903
Molecular Weight (calculated)
21096.5 Da
IEP (calculated)
8.628
GRAVY (calculated)
-0.588
Length
184 amino acids
Sequence
(BLAST)
001: MSHLSILSFK YNLAKLRSKA GRPIGRPLSA RDRQYSDLST YKPDDEEMKK VFSMIAGQSH GKISKKDLQL LLERFGKADA AAEARRMMCV ADHNKDGYMD
101: LEEFMEVHRN GVQLGDIRRA FFVFDRNGDG RISAEEVMTV LCNLGQSCSL DDCRKMVREV DRNGDGFVDM DEFMVMMTRP RRKP
Best Arabidopsis Sequence Match ( AT2G15680.1 )
(BLAST)
001: MSNVSFLELQ YKLSKNKMLR KPSRMFSRDR QSSGLSSPGP GGFSQPSVNE MRRVFSRFDL DKDGKISQTE YKVVLRALGQ ERAIEDVPKI FKAVDLDGDG
101: FIDFREFIDA YKRSGGIRSS DIRNSFWTFD LNGDGKISAE EVMSVLWKLG ERCSLEDCNR MVRAVDADGD GLVNMEEFIK MMSSNNV
Arabidopsis Description
CML30CML30 [Source:UniProtKB/TrEMBL;Acc:A0A178VPG8]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.