CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71148	Soybean	cytosol	90.81	90.81
VIT_03s0063g00530.t01	Wine grape	cytosol	69.73	70.88
CDY66855	Canola	plastid	62.16	60.85
Solyc01g108190.2.1	Tomato	plastid	60.0	60.0
Bra039845.1-P	Field mustard	plastid	61.08	59.79
CDY37233	Canola	plastid	61.08	59.79
AT2G15680.1	Thale cress	plastid	60.0	59.36
PGSC0003DMT400066610	Potato	plastid	57.3	57.3
HORVU5Hr1G068490.1	Barley	cytosol	23.24	50.0
KRH76994	Soybean	cytosol, plastid	47.03	46.52
KRH28478	Soybean	cytosol, plastid	47.03	46.52
EER96860	Sorghum	cytosol, mitochondrion	44.86	45.11
KRH57807	Soybean	plastid	45.41	44.44
KRH30955	Soybean	cytosol	32.43	43.8
KRH17370	Soybean	cytosol	32.97	43.26
KRG97926	Soybean	cytosol	32.43	43.17
KRH04628	Soybean	plastid	44.32	43.16
GSMUA_Achr9P27060_001	Banana	plastid	45.41	42.64
KRH73006	Soybean	cytosol	32.43	42.55
TraesCS5B01G237500.1	Wheat	mitochondrion	41.62	42.08
TraesCS5D01G246000.1	Wheat	mitochondrion	41.08	41.53
TraesCS5A01G238900.1	Wheat	mitochondrion	41.08	41.53
Os09t0458700-01	Rice	cytosol, mitochondrion	41.08	41.08
Zm00001d020722_P001	Maize	cytosol, mitochondrion	40.0	40.22
KRG95097	Soybean	cytosol	29.73	36.18
KRH75577	Soybean	cytosol	29.73	36.18
KRH66763	Soybean	cytosol	29.19	35.53
KRH60410	Soybean	cytosol, plastid	35.68	35.11
KRH24162	Soybean	cytosol	25.95	34.29
KRH49632	Soybean	cytosol, mitochondrion, plastid	33.51	34.07
KRH29625	Soybean	cytosol	18.92	33.02
KRH41828	Soybean	cytosol	31.35	32.22
KRH37459	Soybean	cytosol	17.3	31.37
KRH48613	Soybean	cytosol	30.27	31.28
KRH16247	Soybean	cytosol	21.62	30.53
KRH02767	Soybean	cytosol	24.32	29.61
KRH15405	Soybean	cytosol	22.16	28.47
KRH76288	Soybean	plastid	32.43	28.04
KRH40630	Soybean	mitochondrion	27.57	27.87
KRH00581	Soybean	plastid	32.97	27.35
KRH65252	Soybean	plastid	31.35	27.1
KRH23209	Soybean	cytosol, mitochondrion	26.49	26.63
KRH60530	Soybean	plastid	30.81	26.39
KRH03663	Soybean	endoplasmic reticulum, extracellular	31.89	25.76
KRH10131	Soybean	endoplasmic reticulum	29.19	25.59
KRH20147	Soybean	extracellular	30.81	24.89
KRG95139	Soybean	plastid	27.57	23.39
KRH24625	Soybean	cytosol	27.57	23.08
KRH66816	Soybean	plastid	25.95	21.92

Protein Annotations

Gene3D:1.10.238.10	EntrezGene:100803158	MapMan:35.1	EMBL:ACUP02004676	EMBL:BT094667	UniProt:C6TAX4
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	EnsemblPlantsGene:GLYMA_07G212000	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:IPR002048	EnsemblPlants:KRH50269	ProteinID:KRH50269	ProteinID:KRH50269.1	PFAM:PF13499
ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR10891	PANTHER:PTHR10891:SF620	SMART:SM00054	SUPFAM:SSF47473
UniParc:UPI0001B16461	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:38351908..38356699

Molecular Weight (calculated)

21206.2 Da

IEP (calculated)

7.511

GRAVY (calculated)

-0.732

Length

185 amino acids

Sequence
(BLAST)

001: MSKTSFLDFQ YNLSRRKYLR KPSRLFSRDR QNSGLKGVFL QPNADEMKQV FDKFDSNKDG KISQQEYKAT MKALGMGDSV HEVPNIFRVV DLDGDGFINF
101: KEFMEAQNKG GGVRTMDIHS AFRTFDRNGD GRISAEEVKE TLGRLGERCS IEDCRRMVRA VDTDGDGMVD MDEFTTMMTQ SLRHV

Best Arabidopsis Sequence Match ( AT2G15680.1 )
(BLAST)

001: MSNVSFLELQ YKLSKNKMLR KPSRMFSRDR QSSGLSSPGP GGFSQPSVNE MRRVFSRFDL DKDGKISQTE YKVVLRALGQ ERAIEDVPKI FKAVDLDGDG
101: FIDFREFIDA YKRSGGIRSS DIRNSFWTFD LNGDGKISAE EVMSVLWKLG ERCSLEDCNR MVRAVDADGD GLVNMEEFIK MMSSNNV

Arabidopsis Description

CML30CML30 [Source:UniProtKB/TrEMBL;Acc:A0A178VPG8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.