CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
cytosol 2
vacuole 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97926	Soybean	cytosol	97.81	96.4
KRH73006	Soybean	cytosol	81.02	78.72
KRH17370	Soybean	cytosol	79.56	77.31
PGSC0003DMT400026987	Potato	cytosol	66.42	62.76
Solyc02g063350.1.1	Tomato	cytosol	65.69	62.07
PGSC0003DMT400078654	Potato	cytosol	67.88	59.62
Solyc02g091500.1.1	Tomato	cytosol	67.15	58.97
VIT_14s0006g01400.t01	Wine grape	cytosol	64.23	58.67
Bra004165.1-P	Field mustard	cytosol	61.31	54.9
CDX96150	Canola	cytosol	61.31	54.9
CDY55679	Canola	cytosol	60.58	54.25
CDX99691	Canola	cytosol	59.12	51.27
CDY27652	Canola	cytosol	59.12	50.94
AT5G37770.1	Thale cress	cytosol	59.85	50.93
Bra025439.1-P	Field mustard	cytosol	59.12	50.62
AT1G66400.1	Thale cress	cytosol	57.66	50.32
KRH75577	Soybean	cytosol	49.63	44.74
KRH24162	Soybean	cytosol	43.8	42.86
KRH41828	Soybean	cytosol	54.01	41.11
KRH48613	Soybean	cytosol	53.28	40.78
KRH37459	Soybean	cytosol	29.93	40.2
KRH02767	Soybean	cytosol	43.8	39.47
KRH15405	Soybean	cytosol	40.88	38.89
KRH29625	Soybean	cytosol	29.2	37.74
KRH16247	Soybean	cytosol	35.04	36.64
KRH60410	Soybean	cytosol, plastid	49.63	36.17
KRH49632	Soybean	cytosol, mitochondrion, plastid	47.45	35.71
KRH66763	Soybean	cytosol	38.69	34.87
KRG95097	Soybean	cytosol	37.96	34.21
KRH60530	Soybean	plastid	51.82	32.87
KRH50269	Soybean	mitochondrion	43.8	32.43
KRH71148	Soybean	cytosol	43.07	31.89
KRH28478	Soybean	cytosol, plastid	41.61	30.48
KRH76288	Soybean	plastid	45.99	29.44
KRH76994	Soybean	cytosol, plastid	40.15	29.41
KRH23209	Soybean	cytosol, mitochondrion	39.42	29.35
KRH65252	Soybean	plastid	45.26	28.97
KRH00581	Soybean	plastid	46.72	28.7
KRH57807	Soybean	plastid	39.42	28.57
KRH04628	Soybean	plastid	39.42	28.42
KRH40630	Soybean	mitochondrion	35.77	26.78
KRH20147	Soybean	extracellular	44.53	26.64
KRH03663	Soybean	endoplasmic reticulum, extracellular	44.53	26.64
KRH10131	Soybean	endoplasmic reticulum	40.15	26.07
KRH24625	Soybean	cytosol	39.42	24.43
KRG95139	Soybean	plastid	35.77	22.48
KRH66816	Soybean	plastid	35.77	22.37

Protein Annotations

EMBL:ACUP02007108	EnsemblPlants:KRH30955	EnsemblPlantsGene:GLYMA_11G217200	EntrezGene:100806813	Gene3D:1.10.238.10	GO:GO:0003674
GO:GO:0005488	GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048
PFAM:PF13499	PFscan:PS50222	ProteinID:KRH30955	ProteinID:KRH30955.1	ScanProsite:PS00018	SMART:SM00054
SUPFAM:SSF47473	UniParc:UPI000233CFCD	UniProt:I1LMD7	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr11:-:31174478..31175312

Molecular Weight (calculated)

15492.5 Da

IEP (calculated)

4.816

GRAVY (calculated)

-0.697

Length

137 amino acids

Sequence
(BLAST)

001: MDEEVRKIFS KFDKNGDGKI SCAELKEMMV ALGSKTTSEE VKRMMAELDR NGDGYIDLKE FGEFHCGGGD GRELREAFEL YDLDKNGLIS AKELHSVMRR
101: LGEKCSLSDC RRMIGNVDAD GDGNVNFEEF KKMMTRS

Best Arabidopsis Sequence Match ( AT1G66400.1 )
(BLAST)

001: MSKNVSRNCL GSMEDIKKVF QRFDKNNDGK ISIDELKDVI GALSPNASQE ETKAMMKEFD LDGNGFIDLD EFVALFQISD QSSNNSAIRD LKEAFDLYDL
101: DRNGRISANE LHSVMKNLGE KCSIQDCQRM INKVDSDGDG CVDFEEFKKM MMINGSA

Arabidopsis Description

CML23Probable calcium-binding protein CML23 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8Y1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.