CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
cytosol 2
vacuole 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH17370	Soybean	cytosol	94.33	94.33
KRH30955	Soybean	cytosol	78.72	81.02
KRG97926	Soybean	cytosol	78.01	79.14
Solyc02g063350.1.1	Tomato	cytosol	66.67	64.83
PGSC0003DMT400026987	Potato	cytosol	66.67	64.83
VIT_14s0006g01400.t01	Wine grape	cytosol	66.67	62.67
PGSC0003DMT400078654	Potato	cytosol	67.38	60.9
Solyc02g091500.1.1	Tomato	cytosol	65.25	58.97
Bra004165.1-P	Field mustard	cytosol	56.03	51.63
CDX96150	Canola	cytosol	56.03	51.63
CDY55679	Canola	cytosol	55.32	50.98
CDY27652	Canola	cytosol	56.74	50.31
Bra025439.1-P	Field mustard	cytosol	56.74	50.0
CDX99691	Canola	cytosol	56.03	50.0
AT1G66400.1	Thale cress	cytosol	53.9	48.41
AT5G37770.1	Thale cress	cytosol	53.9	47.2
KRH24162	Soybean	cytosol	46.81	47.14
KRH48613	Soybean	cytosol	57.45	45.25
KRH02767	Soybean	cytosol	48.23	44.74
KRH15405	Soybean	cytosol	45.39	44.44
KRH75577	Soybean	cytosol	46.81	43.42
KRH41828	Soybean	cytosol	55.32	43.33
KRH16247	Soybean	cytosol	37.59	40.46
KRH37459	Soybean	cytosol	28.37	39.22
KRH29625	Soybean	cytosol	29.08	38.68
KRH60410	Soybean	cytosol, plastid	50.35	37.77
KRH66763	Soybean	cytosol	39.72	36.84
KRG95097	Soybean	cytosol	39.01	36.18
KRH49632	Soybean	cytosol, mitochondrion, plastid	44.68	34.62
KRH60530	Soybean	plastid	52.48	34.26
KRH50269	Soybean	mitochondrion	42.55	32.43
KRH71148	Soybean	cytosol	42.55	32.43
KRH76288	Soybean	plastid	48.94	32.24
KRH65252	Soybean	plastid	48.23	31.78
KRH00581	Soybean	plastid	49.65	31.39
KRH28478	Soybean	cytosol, plastid	40.43	30.48
KRH23209	Soybean	cytosol, mitochondrion	39.72	30.43
KRH76994	Soybean	cytosol, plastid	39.72	29.95
KRH57807	Soybean	plastid	39.72	29.63
KRH40630	Soybean	mitochondrion	37.59	28.96
KRH04628	Soybean	plastid	39.01	28.95
KRH10131	Soybean	endoplasmic reticulum	41.84	27.96
KRH24625	Soybean	cytosol	41.84	26.7
KRH20147	Soybean	extracellular	42.55	26.2
KRH03663	Soybean	endoplasmic reticulum, extracellular	41.84	25.76
KRG95139	Soybean	plastid	34.04	22.02
KRH66816	Soybean	plastid	33.33	21.46

Protein Annotations

Gene3D:1.10.238.10	EntrezGene:100796491	MapMan:35.1	EMBL:ACUP02001261	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	EnsemblPlantsGene:GLYMA_02G245700	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	UniProt:I1JHX0
InterPro:IPR002048	EnsemblPlants:KRH73006	ProteinID:KRH73006	ProteinID:KRH73006.1	PFAM:PF13499	ScanProsite:PS00018
PFscan:PS50222	PANTHER:PTHR10891	PANTHER:PTHR10891:SF698	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI0002337B7C

Description

hypothetical protein

Coordinates

chr2:-:43391804..43393333

Molecular Weight (calculated)

15897.7 Da

IEP (calculated)

4.395

GRAVY (calculated)

-0.718

Length

141 amino acids

Sequence
(BLAST)

001: MDVEVRQIFN KFDKNGDGKI SVTELKDMLA ALGSKTTDEE LKRMMEELDQ NGDGFIDLKE FADFHCNGGA GKDDSKELRD AFDLYDVDKN GLISAKELHD
101: VLRNLGEKCS LSDCRRMISN VDADGDGNVN FEEFKKMMTR S

Best Arabidopsis Sequence Match ( AT1G66400.1 )
(BLAST)

001: MSKNVSRNCL GSMEDIKKVF QRFDKNNDGK ISIDELKDVI GALSPNASQE ETKAMMKEFD LDGNGFIDLD EFVALFQISD QSSNNSAIRD LKEAFDLYDL
101: DRNGRISANE LHSVMKNLGE KCSIQDCQRM INKVDSDGDG CVDFEEFKKM MMINGSA

Arabidopsis Description

CML23Probable calcium-binding protein CML23 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8Y1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.