CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH76288	Soybean	plastid	95.07	99.07
KRH65252	Soybean	plastid	87.0	90.65
VIT_15s0048g00790.t01	Wine grape	mitochondrion	53.81	58.82
KRH17370	Soybean	cytosol	31.39	49.65
KRH73006	Soybean	cytosol	31.39	49.65
PGSC0003DMT400033250	Potato	cytosol	41.7	48.44
KRH30955	Soybean	cytosol	28.7	46.72
KRG97926	Soybean	cytosol	28.7	46.04
KRH75577	Soybean	cytosol	29.6	43.42
KRH29625	Soybean	cytosol	19.28	40.57
KRH66763	Soybean	cytosol	26.46	38.82
KRG95097	Soybean	cytosol	26.01	38.16
KRH48613	Soybean	cytosol	30.49	37.99
KRH49632	Soybean	cytosol, mitochondrion, plastid	30.94	37.91
KRH60410	Soybean	cytosol, plastid	31.84	37.77
KRH28478	Soybean	cytosol, plastid	31.39	37.43
KRH24162	Soybean	cytosol	23.32	37.14
KRH76994	Soybean	cytosol, plastid	30.94	36.9
KRH41828	Soybean	cytosol	29.15	36.11
KRH16247	Soybean	cytosol	21.08	35.88
KRH02767	Soybean	cytosol	24.22	35.53
KRH37459	Soybean	cytosol	16.14	35.29
KRH15405	Soybean	cytosol	21.97	34.03
KRH57807	Soybean	plastid	28.7	33.86
KRH04628	Soybean	plastid	28.7	33.68
KRH40630	Soybean	mitochondrion	27.35	33.33
KRH50269	Soybean	mitochondrion	27.35	32.97
KRH71148	Soybean	cytosol	27.35	32.97
KRH23209	Soybean	cytosol, mitochondrion	25.56	30.98
KRH10131	Soybean	endoplasmic reticulum	27.35	28.91
KRH60530	Soybean	plastid	27.8	28.7
KRH24625	Soybean	cytosol	28.25	28.51
KRH66816	Soybean	plastid	27.35	27.85
KRG95139	Soybean	plastid	26.91	27.52
KRH03663	Soybean	endoplasmic reticulum, extracellular	28.25	27.51
KRH20147	Soybean	extracellular	27.8	27.07

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	EMBL:ACUP02011454	ncoils:Coil	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	EnsemblPlantsGene:GLYMA_18G221300	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	UniProt:I1N3F4
InterPro:IPR002048	EnsemblPlants:KRH00581	ProteinID:KRH00581	ProteinID:KRH00581.1	PFAM:PF13499	ScanProsite:PS00018
PFscan:PS50222	PANTHER:PTHR10891	PANTHER:PTHR10891:SF695	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI000233DFD0
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr18:+:50849524..50851190

Molecular Weight (calculated)

25420.2 Da

IEP (calculated)

4.398

GRAVY (calculated)

-0.474

Length

223 amino acids

Sequence
(BLAST)

001: MLQPFTTCFT FLHRKTKFFL NKPRIKDMMS ACRKRRQSNR KFTSSSDLST SSFLHMELST QFHQVFKLID TNGDGKISAT ELSEVLSCLG YNKCTADKEA
101: EGMVRVLDFN GDGFVDLDEF MIVMNGMEEE EEEEEEEEEE EEEKFGSGME HGGGYLMDAF LIFDTDKNGL ISAKELQRVL INLGCDNCSL RECKRMIKGV
201: DKNGDGFVDF EEFLSMMQSG LAN

Best Arabidopsis Sequence Match ( AT1G24620.1 )
(BLAST)

001: MFNKNQGSNG GSSSNVGIGA DSPYLQKARS GKTEIRELEA VFKKFDVNGD GKISSKELGA IMTSLGHEVP EEELEKAITE IDRKGDGYIN FEEFVELNTK
101: GMDQNDVLEN LKDAFSVYDI DGNGSISAEE LHEVLRSLGD ECSIAECRKM IGGVDKDGDG TIDFEEFKIM MTMGSRRDNV MGGGPR

Arabidopsis Description

CML25Probable calcium-binding protein CML25 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYK2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.