CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 3
nucleus 1
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g050750.1.1	Tomato	cytosol, unclear	55.92	78.67
PGSC0003DMT400018016	Potato	cytosol	55.92	78.67
KRH29625	Soybean	cytosol	39.34	78.3
KRH23209	Soybean	cytosol, mitochondrion	67.77	77.72
KRG95097	Soybean	cytosol	54.5	75.66
KRH66763	Soybean	cytosol	53.55	74.34
VIT_05s0102g00450.t01	Wine grape	endoplasmic reticulum, golgi	71.09	70.09
Solyc11g044920.1.1	Tomato	cytosol	39.34	68.59
PGSC0003DMT400069195	Potato	golgi, plastid	69.67	67.12
KRH24625	Soybean	cytosol	63.98	61.09
KRH17370	Soybean	cytosol	28.91	43.26
KRH73006	Soybean	cytosol	27.96	41.84
KRH30955	Soybean	cytosol	26.07	40.15
KRG97926	Soybean	cytosol	26.07	39.57
KRH20147	Soybean	extracellular	42.18	38.86
KRH03663	Soybean	endoplasmic reticulum, extracellular	41.71	38.43
KRH60410	Soybean	cytosol, plastid	33.65	37.77
KRH75577	Soybean	cytosol	27.01	37.5
KRH16247	Soybean	cytosol	21.8	35.11
KRH49632	Soybean	cytosol, mitochondrion, plastid	29.86	34.62
KRH41828	Soybean	cytosol	28.44	33.33
KRH24162	Soybean	cytosol	21.8	32.86
KRH40630	Soybean	mitochondrion	28.44	32.79
KRH37459	Soybean	cytosol	15.17	31.37
KRH48613	Soybean	cytosol	26.07	30.73
KRH57807	Soybean	plastid	27.49	30.69
KRH28478	Soybean	cytosol, plastid	27.01	30.48
KRH71148	Soybean	cytosol	26.54	30.27
KRH04628	Soybean	plastid	27.01	30.0
KRH50269	Soybean	mitochondrion	25.59	29.19
KRH02767	Soybean	cytosol	20.85	28.95
KRH76994	Soybean	cytosol, plastid	25.59	28.88
KRH15405	Soybean	cytosol	19.43	28.47
KRH65252	Soybean	plastid	27.96	27.57
KRH76288	Soybean	plastid	27.96	27.57
KRH00581	Soybean	plastid	28.91	27.35
KRH60530	Soybean	plastid	26.07	25.46
KRG95139	Soybean	plastid	22.27	21.56
KRH66816	Soybean	plastid	21.8	21.0

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	UniProt:A0A0R0G3H9	EMBL:ACUP02009119	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	EnsemblPlantsGene:GLYMA_15G030100	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	InterPro:IPR002048
EnsemblPlants:KRH10131	ProteinID:KRH10131	ProteinID:KRH10131.1	PFAM:PF13499	PFAM:PF13833	PRINTS:PR01697
ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR10891	PANTHER:PTHR10891:SF546	SMART:SM00054	SUPFAM:SSF47473
SignalP:SignalP-noTM	UniParc:UPI0001817FB2	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr15:+:2420032..2426219

Molecular Weight (calculated)

23935.7 Da

IEP (calculated)

4.663

GRAVY (calculated)

-0.344

Length

211 amino acids

Sequence
(BLAST)

001: MPTILHRIFL LYNLVHSFLL CLVPKKVRPF LPPSWFQTKT ITAPSSSSSS SSSARIIKRT TMDPNELKRV FQMFDRNGDG RITKKELNDS LENLGIFIPD
101: KELGQMIERI DVNGDGCVDI DEFGELYQTI MDERDEEEDM REAFNVFDQN ADGFITVDEL RTVLSSLGLK QGRTVQDCKN MISKVDVDGD GMVDFKEFKQ
201: MMKGGGFSAL T

Best Arabidopsis Sequence Match ( AT2G43290.1 )
(BLAST)

001: MVRIFLLYNI LNSFLLSLVP KKLRTLFPLS WFDKTLHKNS PPSPSTMLPS PSSSSAPTKR IDPSELKRVF QMFDKNGDGR ITKEELNDSL ENLGIYIPDK
101: DLTQMIHKID ANGDGCVDID EFESLYSSIV DEHHNDGETE EEDMKDAFNV FDQDGDGFIT VEELKSVMAS LGLKQGKTLD GCKKMIMQVD ADGDGRVNYK
201: EFLQMMKGGG FSSSN

Arabidopsis Description

CML5MSS3 [Source:UniProtKB/TrEMBL;Acc:A0A178VP84]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.