CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
mitochondrion 3
cytosol 2
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH28478	Soybean	cytosol, plastid	91.98	91.98
KRH57807	Soybean	plastid	69.52	68.78
KRH04628	Soybean	plastid	68.98	67.89
Solyc02g065000.1.1	Tomato	cytosol	48.13	52.02
PGSC0003DMT400089961	Potato	cytosol	47.59	51.45
KRH50269	Soybean	mitochondrion	46.52	47.03
KRH71148	Soybean	cytosol	44.92	45.41
HORVU5Hr1G068490.1	Barley	cytosol	20.32	44.19
KRH17370	Soybean	cytosol	30.48	40.43
KRG97926	Soybean	cytosol	29.95	40.29
KRH30955	Soybean	cytosol	29.41	40.15
KRH73006	Soybean	cytosol	29.95	39.72
EER96860	Sorghum	cytosol, mitochondrion	39.04	39.67
TraesCS5B01G237500.1	Wheat	mitochondrion	37.97	38.8
TraesCS5D01G246000.1	Wheat	mitochondrion	37.43	38.25
KRH29625	Soybean	cytosol	21.39	37.74
TraesCS5A01G238900.1	Wheat	mitochondrion	36.36	37.16
Os09t0458700-01	Rice	cytosol, mitochondrion	36.36	36.76
Zm00001d020722_P001	Maize	cytosol, mitochondrion	35.83	36.41
KRH75577	Soybean	cytosol	29.41	36.18
KRH66763	Soybean	cytosol	28.88	35.53
KRG95097	Soybean	cytosol	28.88	35.53
KRH24162	Soybean	cytosol	25.67	34.29
KRH49632	Soybean	cytosol, mitochondrion, plastid	33.16	34.07
GSMUA_Achr9P27060_001	Banana	plastid	35.83	34.01
KRH60410	Soybean	cytosol, plastid	33.69	33.51
KRH41828	Soybean	cytosol	31.02	32.22
KRH00581	Soybean	plastid	36.9	30.94
KRH76288	Soybean	plastid	35.29	30.84
KRH37459	Soybean	cytosol	16.58	30.39
KRH65252	Soybean	plastid	34.76	30.37
KRH02767	Soybean	cytosol	24.06	29.61
KRH48613	Soybean	cytosol	27.27	28.49
KRH23209	Soybean	cytosol, mitochondrion	27.81	28.26
KRH16247	Soybean	cytosol	19.79	28.24
KRH60530	Soybean	plastid	30.48	26.39
KRH24625	Soybean	cytosol	30.48	25.79
KRH40630	Soybean	mitochondrion	25.13	25.68
KRH10131	Soybean	endoplasmic reticulum	28.88	25.59
KRH03663	Soybean	endoplasmic reticulum, extracellular	31.02	25.33
KRH15405	Soybean	cytosol	19.25	25.0
KRG95139	Soybean	plastid	28.34	24.31
KRH20147	Soybean	extracellular	29.41	24.02
KRH66816	Soybean	plastid	27.81	23.74

Protein Annotations

Gene3D:1.10.238.10	EntrezGene:100790495	MapMan:35.1	EMBL:ACUP02000649	EMBL:BT094644	UniProt:C6TAV2
ncoils:Coil	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	EnsemblPlantsGene:GLYMA_01G185600	GO:GO:0003674
GO:GO:0005488	GO:GO:0005509	InterPro:IPR002048	EnsemblPlants:KRH76994	ProteinID:KRH76994	ProteinID:KRH76994.1
PFAM:PF13499	PRINTS:PR00450	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR10891	PANTHER:PTHR10891:SF685
SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI0001B163CC	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:52105530..52106588

Molecular Weight (calculated)

21204.3 Da

IEP (calculated)

8.180

GRAVY (calculated)

-0.571

Length

187 amino acids

Sequence
(BLAST)

001: MSSLSFLKFN YSFSWKPSAS RKNVVKKNSF ISRQTSNEGQ SFLPKEEEMK WVFQKFDTNK DGKVSLEEYK AAARALDRAI GEAEAVKAFR VMDTDEDGFI
101: DFKEFMKMFN EEGRIKETEI KNAFQVFDLN GDGKISAEEL SQVLKRLGES CSLSACKKMV KGVDGNGDGF IDLNEFTRMM MSGKKLG

Best Arabidopsis Sequence Match ( AT2G15680.1 )
(BLAST)

001: MSNVSFLELQ YKLSKNKMLR KPSRMFSRDR QSSGLSSPGP GGFSQPSVNE MRRVFSRFDL DKDGKISQTE YKVVLRALGQ ERAIEDVPKI FKAVDLDGDG
101: FIDFREFIDA YKRSGGIRSS DIRNSFWTFD LNGDGKISAE EVMSVLWKLG ERCSLEDCNR MVRAVDADGD GLVNMEEFIK MMSSNNV

Arabidopsis Description

CML30CML30 [Source:UniProtKB/TrEMBL;Acc:A0A178VPG8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.