Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G246000.1 | Wheat | mitochondrion | 95.35 | 44.81 |
| TraesCS5B01G237500.1 | Wheat | mitochondrion | 94.19 | 44.26 |
| TraesCS5A01G238900.1 | Wheat | mitochondrion | 94.19 | 44.26 |
| Zm00001d020722_P001 | Maize | cytosol, mitochondrion | 82.56 | 38.59 |
| Os09t0458700-01 | Rice | cytosol, mitochondrion | 81.4 | 37.84 |
| EER96860 | Sorghum | cytosol, mitochondrion | 77.91 | 36.41 |
| PGSC0003DMT400089961 | Potato | cytosol | 52.33 | 26.01 |
| Solyc02g065000.1.1 | Tomato | cytosol | 51.16 | 25.43 |
| VIT_03s0063g00530.t01 | Wine grape | cytosol | 52.33 | 24.73 |
| HORVU4Hr1G081250.1 | Barley | cytosol | 17.44 | 24.59 |
| GSMUA_Achr9P27060_001 | Banana | plastid | 55.81 | 24.37 |
| Bra039845.1-P | Field mustard | plastid | 51.16 | 23.28 |
| CDY37233 | Canola | plastid | 51.16 | 23.28 |
| CDY66855 | Canola | plastid | 51.16 | 23.28 |
| PGSC0003DMT400066610 | Potato | plastid | 50.0 | 23.24 |
| KRH50269 | Soybean | mitochondrion | 50.0 | 23.24 |
| Solyc01g108190.2.1 | Tomato | plastid | 48.84 | 22.7 |
| KRH71148 | Soybean | cytosol | 48.84 | 22.7 |
| AT2G15680.1 | Thale cress | plastid | 46.51 | 21.39 |
| KRH28478 | Soybean | cytosol, plastid | 46.51 | 21.39 |
| KRH57807 | Soybean | plastid | 46.51 | 21.16 |
| KRH76994 | Soybean | cytosol, plastid | 44.19 | 20.32 |
| KRH04628 | Soybean | plastid | 44.19 | 20.0 |
| HORVU5Hr1G043460.1 | Barley | plastid | 40.7 | 19.13 |
| HORVU1Hr1G057410.1 | Barley | mitochondrion | 37.21 | 16.93 |
| HORVU7Hr1G008910.2 | Barley | cytosol | 40.7 | 16.36 |
| HORVU7Hr1G072770.1 | Barley | plastid | 37.21 | 16.16 |
| HORVU3Hr1G007420.1 | Barley | cytosol | 34.88 | 16.13 |
| HORVU3Hr1G107090.2 | Barley | cytosol, plastid | 34.88 | 15.71 |
| HORVU4Hr1G050990.1 | Barley | plastid | 34.88 | 15.54 |
| HORVU5Hr1G085800.2 | Barley | cytosol | 31.4 | 15.43 |
| HORVU1Hr1G029850.1 | Barley | cytosol | 37.21 | 14.04 |
| HORVU7Hr1G027770.3 | Barley | endoplasmic reticulum | 36.05 | 13.54 |
| HORVU4Hr1G032570.1 | Barley | cytosol, plastid | 22.09 | 12.67 |
| HORVU6Hr1G076690.1 | Barley | cytosol | 22.09 | 12.67 |
| HORVU0Hr1G031990.1 | Barley | cytosol, plastid | 23.26 | 12.66 |
| HORVU5Hr1G077930.1 | Barley | cytosol | 20.93 | 12.08 |
| HORVU1Hr1G074240.1 | Barley | cytosol, plastid | 20.93 | 12.0 |
| HORVU5Hr1G018360.1 | Barley | cytosol, plastid | 20.93 | 11.92 |
| HORVU1Hr1G023720.1 | Barley | cytosol, plastid | 22.09 | 11.88 |
| HORVU7Hr1G101640.1 | Barley | cytosol, plastid | 20.93 | 11.84 |
| HORVU5Hr1G117570.1 | Barley | cytosol | 17.44 | 11.54 |
| HORVU3Hr1G106950.3 | Barley | cytosol | 36.05 | 11.48 |
| HORVU7Hr1G029640.1 | Barley | cytosol, plastid | 19.77 | 10.83 |
| HORVU4Hr1G085560.1 | Barley | cytosol, plastid | 22.09 | 10.73 |
| HORVU6Hr1G034200.1 | Barley | cytosol, plastid | 19.77 | 10.69 |
| HORVU5Hr1G073590.1 | Barley | cytosol, plastid | 10.47 | 4.95 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G068490.1 | EnsemblPlantsGene:HORVU5Hr1G068490 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR10891 | PANTHER:PTHR10891:SF620 |
| PFAM:PF13499 | PFscan:PS50222 | ScanProsite:PS00018 | SEG:seg | SMART:SM00054 | SUPFAM:SSF47473 |
| UniParc:UPI000B45FD34 | UniProt:A0A287RMQ4 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:517753449..517753777
Molecular Weight (calculated)
10250.4 Da
IEP (calculated)
4.931
GRAVY (calculated)
-0.617
Length
86 amino acids
Sequence
(BLAST)
(BLAST)
1: MDLEEFMEVH KNGVLLGDIR RAFFVFDRDR DGRITAEEVM DVLRKLGDSC SLEDCRKMVK EIDRNHDGYV DMDDFMAMMT RPRKRM
001: MSNVSFLELQ YKLSKNKMLR KPSRMFSRDR QSSGLSSPGP GGFSQPSVNE MRRVFSRFDL DKDGKISQTE YKVVLRALGQ ERAIEDVPKI FKAVDLDGDG
101: FIDFREFIDA YKRSGGIRSS DIRNSFWTFD LNGDGKISAE EVMSVLWKLG ERCSLEDCNR MVRAVDADGD GLVNMEEFIK MMSSNNV
101: FIDFREFIDA YKRSGGIRSS DIRNSFWTFD LNGDGKISAE EVMSVLWKLG ERCSLEDCNR MVRAVDADGD GLVNMEEFIK MMSSNNV
Arabidopsis Description
CML30CML30 [Source:UniProtKB/TrEMBL;Acc:A0A178VPG8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.